RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
FOXN3-217ENST00000557572 ATXN3LQ9H3M9 355 aa6.9□□□□□ -1.3
FOXN3-217ENST00000557572 NOVA2Q9UNW9 492 aaKnown RBP6.9□□□□□ -1.3
FOXN3-217ENST00000557572 GDNFP39905 211 aa6.89□□□□□ -1.31
FOXN3-217ENST00000557572 SKOR2Q2VWA4 1001 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-217ENST00000557572 PEAR1Q5VY43 1037 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-217ENST00000557572 HEXIM2Q96MH2 286 aaKnown RBP6.89□□□□□ -1.31
FOXN3-217ENST00000557572 CARS2Q9HA77 564 aaKnown RBP6.89□□□□□ -1.31
FOXN3-217ENST00000557572 SYNGAP1Q96PV0 1343 aa6.88□□□□□ -1.31
FOXN3-217ENST00000557572 ACIN1Q9UKV3 1341 aaKnown RBP6.88□□□□□ -1.31
FOXN3-217ENST00000557572 LIG1P18858 919 aa6.88□□□□□ -1.31
FOXN3-217ENST00000557572 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
FOXN3-217ENST00000557572 CALR3Q96L12 384 aaKnown RBP6.88□□□□□ -1.31
FOXN3-217ENST00000557572 SLC26A8Q96RN1 970 aa6.88□□□□□ -1.31
FOXN3-217ENST00000557572 C19orf73Q9NVV2 129 aa6.88□□□□□ -1.31
FOXN3-217ENST00000557572 PCOLCE2Q9UKZ9 415 aa6.88□□□□□ -1.31
FOXN3-217ENST00000557572 TTLL4Q14679 1199 aa6.87□□□□□ -1.31
FOXN3-217ENST00000557572 CXorf38Q8TB03 319 aa6.87□□□□□ -1.31
FOXN3-217ENST00000557572 KCNC2Q96PR1 638 aa6.87□□□□□ -1.31
FOXN3-217ENST00000557572 PDGFAP04085 211 aa6.86□□□□□ -1.31
FOXN3-217ENST00000557572 ADRB1P08588 477 aa6.86□□□□□ -1.31
FOXN3-217ENST00000557572 SLFN14P0C7P3 912 aa6.86□□□□□ -1.31
FOXN3-217ENST00000557572 HCLS1P14317 486 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-217ENST00000557572 ID3Q02535 119 aa6.86□□□□□ -1.31
FOXN3-217ENST00000557572 SPRED3Q2MJR0 410 aa6.86□□□□□ -1.31
FOXN3-217ENST00000557572 WDR89Q96FK6 387 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-217ENST00000557572 SSU72Q9NP77 194 aaKnown RBP6.86□□□□□ -1.31
FOXN3-217ENST00000557572 CXXC1Q9P0U4 656 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-217ENST00000557572 TNFRSF21O75509 655 aa6.85□□□□□ -1.31
FOXN3-217ENST00000557572 DISC1Q9NRI5 854 aa6.85□□□□□ -1.31
FOXN3-217ENST00000557572 RTEL1Q9NZ71 1219 aa6.85□□□□□ -1.31
FOXN3-217ENST00000557572 GTF2IRD1Q9UHL9 959 aa6.85□□□□□ -1.31
FOXN3-217ENST00000557572 CELA3BP08861 270 aa6.84□□□□□ -1.31
FOXN3-217ENST00000557572 GRIA4P48058 902 aa6.84□□□□□ -1.31
FOXN3-217ENST00000557572 NKPD1Q17RQ9 610 aa6.84□□□□□ -1.31
FOXN3-217ENST00000557572 MARCH10Q8NA82 808 aaPredicted RBP6.84□□□□□ -1.31
FOXN3-217ENST00000557572 ABHD4Q8TB40 342 aa6.84□□□□□ -1.31
FOXN3-217ENST00000557572 ZXDCQ2QGD7 858 aaPredicted RBP6.83□□□□□ -1.32
FOXN3-217ENST00000557572 ZC3H12CQ9C0D7 883 aaKnown RBP6.83□□□□□ -1.32
FOXN3-217ENST00000557572 FOXD3Q9UJU5 478 aaPredicted RBP6.83□□□□□ -1.32
FOXN3-217ENST00000557572 AMOTL2Q9Y2J4 779 aa6.83□□□□□ -1.32
FOXN3-217ENST00000557572 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
FOXN3-217ENST00000557572 GNAT3A8MTJ3 354 aa6.81□□□□□ -1.32
FOXN3-217ENST00000557572 IGF2BP3O00425 579 aaKnown RBP eCLIP6.81□□□□□ -1.322e-6■■■□□ 18.3
FOXN3-217ENST00000557572 B3GALT4O96024 378 aa6.81□□□□□ -1.32
FOXN3-217ENST00000557572 MZF1P28698 734 aaPredicted RBP6.81□□□□□ -1.32
FOXN3-217ENST00000557572 CLCN7P51798 805 aa6.81□□□□□ -1.32
FOXN3-217ENST00000557572 TPRNQ4KMQ1 711 aa6.81□□□□□ -1.32
FOXN3-217ENST00000557572 TCERG1LQ5VWI1 586 aa6.81□□□□□ -1.32
FOXN3-217ENST00000557572 FAM214BQ7L5A3 538 aa6.81□□□□□ -1.32
FOXN3-217ENST00000557572 CCNJLQ8IV13 435 aa6.81□□□□□ -1.32
FOXN3-217ENST00000557572 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.81□□□□□ -1.32
FOXN3-217ENST00000557572 CCDC86Q9H6F5 360 aaKnown RBP6.81□□□□□ -1.32
FOXN3-217ENST00000557572 SUV39H1O43463 412 aa6.8□□□□□ -1.32
FOXN3-217ENST00000557572 RAC2P15153 192 aa6.8□□□□□ -1.32
FOXN3-217ENST00000557572 FAM69CQ0P6D2 419 aa6.8□□□□□ -1.32
FOXN3-217ENST00000557572 ERICH6BQ5W0A0 696 aa6.8□□□□□ -1.32
FOXN3-217ENST00000557572 NPAS4Q8IUM7 802 aa6.8□□□□□ -1.32
FOXN3-217ENST00000557572 FNBP4Q8N3X1 1017 aaPredicted RBP6.8□□□□□ -1.32
FOXN3-217ENST00000557572 BAHD1Q8TBE0 780 aaPredicted RBP6.8□□□□□ -1.32
FOXN3-217ENST00000557572 LIN7BQ9HAP6 207 aa6.8□□□□□ -1.32
FOXN3-217ENST00000557572 ATP13A1Q9HD20 1204 aa6.8□□□□□ -1.32
FOXN3-217ENST00000557572 TRIM13O60858 407 aa6.79□□□□□ -1.32
FOXN3-217ENST00000557572 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
FOXN3-217ENST00000557572 SRFP11831 508 aa6.79□□□□□ -1.32
FOXN3-217ENST00000557572 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
FOXN3-217ENST00000557572 NOM1Q5C9Z4 860 aaKnown RBP6.79□□□□□ -1.32
FOXN3-217ENST00000557572 CCDC120Q96HB5 630 aa6.79□□□□□ -1.32
FOXN3-217ENST00000557572 ZNF862O60290 1169 aa6.78□□□□□ -1.32
FOXN3-217ENST00000557572 IGHA2P01877 340 aa6.78□□□□□ -1.32
FOXN3-217ENST00000557572 ISL2Q96A47 359 aa6.78□□□□□ -1.32
FOXN3-217ENST00000557572 TCF12Q99081 682 aa6.78□□□□□ -1.32
FOXN3-217ENST00000557572 CNOT6Q9ULM6 557 aaKnown RBP6.78□□□□□ -1.32
FOXN3-217ENST00000557572 SASH1O94885 1247 aa6.77□□□□□ -1.33
FOXN3-217ENST00000557572 SEPT3Q9UH03 358 aa6.77□□□□□ -1.33
FOXN3-217ENST00000557572 POLIQ9UNA4 740 aa6.77□□□□□ -1.33
FOXN3-217ENST00000557572 A0A1W2PP55 124 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 NEFMP07197 916 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 INSRRP14616 1297 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 DLG4P78352 724 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 TTC6Q86TZ1 520 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 HSPA12BQ96MM6 686 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 XYLT2Q9H1B5 865 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 PRDM10Q9NQV6 1147 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 ZMIZ1Q9ULJ6 1067 aa6.76□□□□□ -1.33
FOXN3-217ENST00000557572 OTOL1A6NHN0 477 aaPredicted RBP6.75□□□□□ -1.33
FOXN3-217ENST00000557572 PUM1Q14671 1186 aaKnown RBP eCLIP6.75□□□□□ -1.33
FOXN3-217ENST00000557572 KIF4BQ2VIQ3 1234 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 ZNF385BQ569K4 471 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 CFAP70Q5T0N1 1121 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 STK32AQ8WU08 396 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 ALPK1Q96QP1 1244 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 ZNF576Q9H609 170 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 ZFYVE28Q9HCC9 887 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 SEMA3GQ9NS98 782 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 PCDHGC5Q9Y5F6 944 aa6.75□□□□□ -1.33
FOXN3-217ENST00000557572 EIF1AXP47813 144 aaKnown RBP6.74□□□□□ -1.33
FOXN3-217ENST00000557572 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
FOXN3-217ENST00000557572 CDKAL1Q5VV42 579 aa6.74□□□□□ -1.33
FOXN3-217ENST00000557572 PROSER2Q86WR7 435 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms