RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 DIEXFQ68CQ4 756 aaKnown RBP7.42□□□□□ -1.22
USP25-209ENST00000547201 AMIGO3Q86WK7 504 aa7.42□□□□□ -1.22
USP25-209ENST00000547201 SIX5Q8N196 739 aa7.42□□□□□ -1.22
USP25-209ENST00000547201 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
USP25-209ENST00000547201 PRDM6Q9NQX0 595 aa7.42□□□□□ -1.22
USP25-209ENST00000547201 MKRN1Q9UHC7 482 aaKnown RBP7.42□□□□□ -1.22
USP25-209ENST00000547201 THRAP3Q9Y2W1 955 aaKnown RBP7.42□□□□□ -1.22
USP25-209ENST00000547201 HCN4Q9Y3Q4 1203 aa7.42□□□□□ -1.22
USP25-209ENST00000547201 RBM19Q9Y4C8 960 aaKnown RBP7.42□□□□□ -1.22
USP25-209ENST00000547201 TAF1LQ8IZX4 1826 aa7.42□□□□□ -1.22
USP25-209ENST00000547201 COL5A3P25940 1745 aaPredicted RBP7.41□□□□□ -1.22
USP25-209ENST00000547201 RGPD3A6NKT7 1758 aaPredicted RBP7.41□□□□□ -1.22
USP25-209ENST00000547201 RGPD4Q7Z3J3 1758 aa7.41□□□□□ -1.22
USP25-209ENST00000547201 SFI1A8K8P3 1242 aa7.41□□□□□ -1.22
USP25-209ENST00000547201 ALBP02768 609 aa7.41□□□□□ -1.22
USP25-209ENST00000547201 TYRO3Q06418 890 aa7.41□□□□□ -1.22
USP25-209ENST00000547201 ZNF530Q6P9A1 599 aaPredicted RBP7.41□□□□□ -1.22
USP25-209ENST00000547201 MPRIPQ6WCQ1 1025 aa7.41□□□□□ -1.22
USP25-209ENST00000547201 RAB44Q7Z6P3 723 aaPredicted RBP7.41□□□□□ -1.22
USP25-209ENST00000547201 TSEN2Q8NCE0 465 aaKnown RBP7.41□□□□□ -1.22
USP25-209ENST00000547201 ZCRB1Q8TBF4 217 aaKnown RBP7.41□□□□□ -1.22
USP25-209ENST00000547201 ZNF594Q96JF6 807 aaPredicted RBP7.41□□□□□ -1.22
USP25-209ENST00000547201 SEMA6BQ9H3T3 888 aa7.41□□□□□ -1.22
USP25-209ENST00000547201 KCNH4Q9UQ05 1017 aa7.41□□□□□ -1.22
USP25-209ENST00000547201 STARD13Q9Y3M8 1113 aa7.41□□□□□ -1.22
USP25-209ENST00000547201 KCNQ3O43525 872 aa7.4□□□□□ -1.22
USP25-209ENST00000547201 PPP1R12BO60237 982 aaPredicted RBP7.4□□□□□ -1.22
USP25-209ENST00000547201 APBA3O96018 575 aa7.4□□□□□ -1.22
USP25-209ENST00000547201 COL9A3Q14050 684 aaPredicted RBP7.4□□□□□ -1.22
USP25-209ENST00000547201 MCM10Q7L590 875 aa7.4□□□□□ -1.22
USP25-209ENST00000547201 MICALL1Q8N3F8 863 aa7.4□□□□□ -1.22
USP25-209ENST00000547201 PNISRQ8TF01 805 aaKnown RBP7.4□□□□□ -1.22
USP25-209ENST00000547201 SUSD3Q96L08 255 aa7.4□□□□□ -1.22
USP25-209ENST00000547201 MRS2Q9HD23 443 aa7.4□□□□□ -1.22
USP25-209ENST00000547201 BCL9O00512 1426 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 MAP3K5Q99683 1374 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 PCDH11XQ9BZA7 1347 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 PCDH11YQ9BZA8 1340 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 ITGB7P26010 798 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 EZH2Q15910 746 aaKnown RBP7.39□□□□□ -1.23
USP25-209ENST00000547201 C8orf86Q6ZUL3 223 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 ZNF280CQ8ND82 737 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 IL17REQ8NFR9 667 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 RAPGEF4Q8WZA2 1011 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 NACC1Q96RE7 527 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 KAT6BQ8WYB5 2073 aa7.39□□□□□ -1.23
USP25-209ENST00000547201 CASZ1Q86V15 1759 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 C4AP0C0L4 1744 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 C4BP0C0L5 1744 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 CICQ96RK0 1608 aaPredicted RBP7.38□□□□□ -1.23
USP25-209ENST00000547201 PRAMEF22A3QJZ6 481 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 EXOC5O00471 708 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 ANP32CO43423 234 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 C21orf2O43822 256 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 NID1P14543 1247 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 TRIM28Q13263 835 aaKnown RBP7.38□□□□□ -1.23
USP25-209ENST00000547201 PDE3BQ13370 1112 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 SLC39A6Q13433 755 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 HIF1AQ16665 826 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 PIGBQ92521 554 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 BHMTQ93088 406 aa7.38□□□□□ -1.23
USP25-209ENST00000547201 PDGFDQ9GZP0 370 aaPredicted RBP7.38□□□□□ -1.23
USP25-209ENST00000547201 MYH14Q7Z406 1995 aaKnown RBP7.38□□□□□ -1.23
USP25-209ENST00000547201 CEMIPQ8WUJ3 1361 aa7.37□□□□□ -1.23
USP25-209ENST00000547201 RNMTO43148 476 aaKnown RBP7.37□□□□□ -1.23
USP25-209ENST00000547201 DKK1O94907 266 aa7.37□□□□□ -1.23
USP25-209ENST00000547201 KRT24Q2M2I5 525 aa7.37□□□□□ -1.23
USP25-209ENST00000547201 ALDH16A1Q8IZ83 802 aa7.37□□□□□ -1.23
USP25-209ENST00000547201 SYTL4Q96C24 671 aaPredicted RBP7.37□□□□□ -1.23
USP25-209ENST00000547201 CFAP53Q96M91 514 aa7.37□□□□□ -1.23
USP25-209ENST00000547201 MIS18AQ9NYP9 233 aa7.37□□□□□ -1.23
USP25-209ENST00000547201 ASAP1Q9ULH1 1129 aa7.37□□□□□ -1.23
USP25-209ENST00000547201 LAMB4A4D0S4 1761 aa7.37□□□□□ -1.23
USP25-209ENST00000547201 UBR3Q6ZT12 1888 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 LILRB5O75023 590 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 RASA1P20936 1047 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 ITPK1Q13572 414 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 ZNF827Q17R98 1081 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 RSPO4Q2I0M5 234 aaPredicted RBP7.36□□□□□ -1.23
USP25-209ENST00000547201 C20orf204Q6ZNR8 217 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 BTLAQ7Z6A9 289 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 FAM9BQ8IZU0 186 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 GAS2L2Q8NHY3 880 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 ARXQ96QS3 562 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 CAMKK2Q96RR4 588 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
USP25-209ENST00000547201 TPSG1Q9NRR2 321 aa7.36□□□□□ -1.23
USP25-209ENST00000547201 PALLDQ8WX93 1383 aa7.35□□□□□ -1.23
USP25-209ENST00000547201 APAF1O14727 1248 aa7.35□□□□□ -1.23
USP25-209ENST00000547201 TMPOP42166 694 aaKnown RBP7.35□□□□□ -1.23
USP25-209ENST00000547201 PIP4K2AP48426 406 aaPredicted RBP7.35□□□□□ -1.23
USP25-209ENST00000547201 SEC13P55735 322 aa7.35□□□□□ -1.23
USP25-209ENST00000547201 TBC1D8BQ0IIM8 1120 aa7.35□□□□□ -1.23
USP25-209ENST00000547201 ZMYM1Q5SVZ6 1142 aa7.35□□□□□ -1.23
USP25-209ENST00000547201 SCG3Q8WXD2 468 aaKnown RBP7.35□□□□□ -1.23
USP25-209ENST00000547201 UBE2OQ9C0C9 1292 aaKnown RBP7.35□□□□□ -1.23
USP25-209ENST00000547201 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
USP25-209ENST00000547201 GRIK4Q16099 956 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms