RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 CUX1P39880 1505 aa6.13□□□□□ -1.43
MDM2-223ENST00000536089 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
MDM2-223ENST00000536089 ALBP02768 609 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 BMP6P22004 513 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 HNRNPUQ00839 825 aaKnown RBP eCLIP6.12□□□□□ -1.43
MDM2-223ENST00000536089 C19orf57Q0VDD7 668 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 SEZ6Q53EL9 994 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 FBXW10Q5XX13 1052 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 MAP1SQ66K74 1059 aaPredicted RBP6.12□□□□□ -1.43
MDM2-223ENST00000536089 BNC2Q6ZN30 1099 aaPredicted RBP6.12□□□□□ -1.43
MDM2-223ENST00000536089 FAM196AQ6ZSG2 479 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 GRIN3AQ8TCU5 1115 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 ABCA10Q8WWZ4 1543 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 ARMC5Q96C12 935 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 TRIM11Q96F44 468 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 CORO1BQ9BR76 489 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 PRDM6Q9NQX0 595 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 GINM1Q9NU53 330 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 STARD13Q9Y3M8 1113 aa6.12□□□□□ -1.43
MDM2-223ENST00000536089 R3HCC1Q9Y3T6 440 aaKnown RBP6.12□□□□□ -1.43
MDM2-223ENST00000536089 ROBO2Q9HCK4 1378 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 GREM1O60565 184 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 F13A1P00488 732 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 CYP11A1P05108 521 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 FGRP09769 529 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 AFF1P51825 1210 aaKnown RBP6.11□□□□□ -1.43
MDM2-223ENST00000536089 PIP4K2BP78356 416 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 TRIM28Q13263 835 aaKnown RBP6.11□□□□□ -1.43
MDM2-223ENST00000536089 COL9A2Q14055 689 aaPredicted RBP6.11□□□□□ -1.43
MDM2-223ENST00000536089 CWF19L2Q2TBE0 894 aaKnown RBP6.11□□□□□ -1.43
MDM2-223ENST00000536089 C8orf86Q6ZUL3 223 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 DPH6Q7L8W6 267 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 CKAP2LQ8IYA6 745 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 GATAD2BQ8WXI9 593 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 MDFIQ99750 246 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 CARD10Q9BWT7 1032 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 MRVI1Q9Y6F6 885 aa6.11□□□□□ -1.43
MDM2-223ENST00000536089 SHROOM2Q13796 1616 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 ADAMTS12P58397 1594 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 GRIN2AQ12879 1464 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 GSTP1P09211 210 aaKnown RBP6.1□□□□□ -1.43
MDM2-223ENST00000536089 GARTP22102 1010 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 PDE3AQ14432 1141 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 POU4F3Q15319 338 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 RSPO4Q2I0M5 234 aaPredicted RBP6.1□□□□□ -1.43
MDM2-223ENST00000536089 HGSNATQ68CP4 663 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 MSL1Q68DK7 614 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 C20orf204Q6ZNR8 217 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 CCDC84Q86UT8 332 aaPredicted RBP6.1□□□□□ -1.43
MDM2-223ENST00000536089 STK35Q8TDR2 534 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 WNT8BQ93098 351 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 ANAPC16Q96DE5 110 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 FERD3LQ96RJ6 166 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 CRBNQ96SW2 442 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 SOX17Q9H6I2 414 aaPredicted RBP6.1□□□□□ -1.43
MDM2-223ENST00000536089 OSGEPQ9NPF4 335 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 KCNQ5Q9NR82 932 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 STRIP2Q9ULQ0 834 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 KIF13AQ9H1H9 1805 aa6.1□□□□□ -1.43
MDM2-223ENST00000536089 FSCN2O14926 492 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 ZNF165P49910 485 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 MPP2Q14168 576 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 GRIK5Q16478 980 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 RASIP1Q5U651 963 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 NBPF11Q86T75 865 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 DMRTC2Q8IXT2 367 aaPredicted RBP6.09□□□□□ -1.43
MDM2-223ENST00000536089 FBXO27Q8NI29 283 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 USP26Q9BXU7 913 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 LNPKQ9C0E8 428 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 ZFP64Q9NPA5 681 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 PCDHA4Q9UN74 947 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 CEP170Q5SW79 1584 aa6.09□□□□□ -1.43
MDM2-223ENST00000536089 NUP160Q12769 1436 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 U2SURPO15042 1029 aaKnown RBP6.08□□□□□ -1.44
MDM2-223ENST00000536089 TRIM37O94972 964 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 MAOBP27338 520 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 CRKP46108 304 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 SOX9P48436 509 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 NLRP12P59046 1061 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 NKAPLQ5M9Q1 402 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 TRAPPC3LQ5T215 181 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 CCDC81Q6ZN84 652 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 GK5Q6ZS86 529 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 KLHL23Q8NBE8 558 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 SRRTQ9BXP5 876 aaKnown RBP6.08□□□□□ -1.44
MDM2-223ENST00000536089 TRIM55Q9BYV6 548 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 ERICH3Q5RHP9 1530 aa6.08□□□□□ -1.44
MDM2-223ENST00000536089 WRNQ14191 1432 aaPredicted RBP eCLIP6.08□□□□□ -1.44
MDM2-223ENST00000536089 BIVM-ERCC5R4GMW8 1640 aa6.07□□□□□ -1.44
MDM2-223ENST00000536089 C9orf172C9J069 976 aa6.07□□□□□ -1.44
MDM2-223ENST00000536089 DYRK3O43781 588 aa6.07□□□□□ -1.44
MDM2-223ENST00000536089 ITGB7P26010 798 aa6.07□□□□□ -1.44
MDM2-223ENST00000536089 RPL6Q02878 288 aaKnown RBP6.07□□□□□ -1.44
MDM2-223ENST00000536089 CCDC144BQ3MJ40 725 aa6.07□□□□□ -1.44
MDM2-223ENST00000536089 HP1BP3Q5SSJ5 553 aaPredicted RBP6.07□□□□□ -1.44
MDM2-223ENST00000536089 ARTNQ5T4W7 220 aa6.07□□□□□ -1.44
MDM2-223ENST00000536089 MPRIPQ6WCQ1 1025 aa6.07□□□□□ -1.44
MDM2-223ENST00000536089 SLITRK4Q8IW52 837 aa6.07□□□□□ -1.44
MDM2-223ENST00000536089 GPBAR1Q8TDU6 330 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms