RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 F8W031 263 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 KDM4AO75164 1064 aa11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 HIBADHP31937 336 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 GYG1P46976 350 aa11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 DGKZQ13574 1117 aa11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 ARMC9Q7Z3E5 817 aa11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 USP44Q9H0E7 712 aa11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 AOX1Q06278 1338 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 PBX2P40425 430 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 GCGRP47871 477 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 TM4SF4P48230 202 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 RGS19P49795 217 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 PRKG1Q13976 671 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 TMEM259Q4ZIN3 620 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 PPP2R2DQ66LE6 453 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 FBXO33Q7Z6M2 555 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 PPP2R3BQ9Y5P8 575 aa11.65□□□□□ -0.54
CTNNA1-221ENST00000520339 MROH5Q6ZUA9 1318 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 CLRN2A0PK11 232 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 MAP3K11Q16584 847 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 ALDH1L2Q3SY69 923 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 MFSD14BQ5SR56 506 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 BANK1Q8NDB2 785 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 ANGEL1Q9UNK9 670 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 VPS9D1Q9Y2B5 631 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
CTNNA1-221ENST00000520339 APBB1O00213 710 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 MYO1BO43795 1136 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 GJA5P36382 358 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 QPCTQ16769 361 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 METTL24Q5JXM2 366 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 SPRYD7Q5W111 196 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 FZD1Q9UP38 647 aa11.63□□□□□ -0.55
CTNNA1-221ENST00000520339 PAPPA2Q9BXP8 1791 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 POLR2AP24928 1970 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 RAD21O60216 631 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 PPP1R12BO60237 982 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 PDE8BO95263 885 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 TBC1D8O95759 1140 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 RFX5P48382 616 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 RASA3Q14644 834 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 GRIK5Q16478 980 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 SUPT20HL1Q3ZLR7 823 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 NBPF12Q5TAG4 269 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 SLC10A4Q96EP9 437 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 ARID3AQ99856 593 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 VEZTQ9HBM0 779 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 ZNF70Q9UC06 446 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 SERPINA10Q9UK55 444 aa11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 TTF2Q9UNY4 1162 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-221ENST00000520339 UNCXA6NJT0 531 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 TRAK2O60296 914 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 USP2O75604 605 aaPredicted RBP11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 FGFR2P21802 821 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 USP46P62068 366 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 SREBF2Q12772 1141 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 NOM1Q5C9Z4 860 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 CTU1Q7Z7A3 348 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 VPS37DQ86XT2 251 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 DZIP1LQ8IYY4 767 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 ZNF296Q8WUU4 475 aaPredicted RBP11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 POM121Q96HA1 1249 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 CLMNQ96JQ2 1002 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 CFHR5Q9BXR6 569 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 C1orf115Q9H7X2 142 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 COL1A1P02452 1464 aaPredicted RBP11.61□□□□□ -0.55
CTNNA1-221ENST00000520339 CCER2I3L3R5 266 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 GPR25O00155 361 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 EYA2O00167 538 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 LILRB3O75022 631 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 CT47B1P0C2W7 299 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 CRKP46108 304 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 BCAMP50895 628 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 CHAF1AQ13111 956 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 TBC1D22AQ8WUA7 517 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 TEPSINQ96N21 525 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 MRIQ9BWK5 157 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 R3HDMLQ9H3Y0 253 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 TDRD3Q9H7E2 651 aaKnown RBP11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 NOB1Q9ULX3 412 aaKnown RBP11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 PSME4Q14997 1843 aa11.6□□□□□ -0.55
CTNNA1-221ENST00000520339 SSC5DA1L4H1 1573 aa11.59□□□□□ -0.55
CTNNA1-221ENST00000520339 MYH3P11055 1940 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms