RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 MAP3K11Q16584 847 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 IFNAR1P17181 557 aa20.58■□□□□ 0.89
SFXN1-208ENST00000507823 SEC23AQ15436 765 aa20.58■□□□□ 0.89
SFXN1-208ENST00000507823 POLR3EQ9NVU0 708 aa20.58■□□□□ 0.89
SFXN1-208ENST00000507823 CCDC69A6NI79 296 aa20.58■□□□□ 0.89
SFXN1-208ENST00000507823 RANBP6O60518 1105 aaKnown RBP20.58■□□□□ 0.89
SFXN1-208ENST00000507823 PPFIA3O75145 1194 aa20.58■□□□□ 0.89
SFXN1-208ENST00000507823 NFXL1Q6ZNB6 911 aa20.58■□□□□ 0.89
SFXN1-208ENST00000507823 MICU3Q86XE3 530 aa20.58■□□□□ 0.89
SFXN1-208ENST00000507823 TDRD7Q8NHU6 1098 aaKnown RBP20.58■□□□□ 0.89
SFXN1-208ENST00000507823 KLRG2A4D1S0 409 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-208ENST00000507823 YEATS4O95619 227 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 SPTY2D1Q68D10 685 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-208ENST00000507823 LRRC37AA6NMS7 1700 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 ESPNB1AK53 854 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 NR1I2O75469 434 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 CCDC192P0DO97 292 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 WTAPQ15007 396 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 OTUD7BQ6GQQ9 843 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 ESR2Q92731 530 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 FTOQ9C0B1 505 aaKnown RBP eCLIP20.57■□□□□ 0.88
SFXN1-208ENST00000507823 FMNL1O95466 1100 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-208ENST00000507823 HOXA10P31260 410 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-208ENST00000507823 BICD2Q8TD16 824 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 ALG1Q9BT22 464 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 ATP8A2Q9NTI2 1148 aa20.57■□□□□ 0.88
SFXN1-208ENST00000507823 NPHP1O15259 732 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 SERPINB2P05120 415 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 SBK1Q52WX2 424 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 CTR9Q6PD62 1173 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 LINC00301Q8NCQ3 95 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 RTN4Q9NQC3 1192 aaKnown RBP20.56■□□□□ 0.88
SFXN1-208ENST00000507823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.56■□□□□ 0.88
SFXN1-208ENST00000507823 LTBP1Q14766 1721 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 A0A1W2PQ27 194 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 A0A1W2PQ64 194 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 A0A1W2PQD8 194 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 PRDX5P30044 214 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 IARSP41252 1262 aaKnown RBP20.56■□□□□ 0.88
SFXN1-208ENST00000507823 ST5P78524 1137 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 PPP2R5BQ15173 497 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 SYNE3Q6ZMZ3 975 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 WDR66Q8TBY9 1149 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 TNMDQ9H2S6 317 aa20.56■□□□□ 0.88
SFXN1-208ENST00000507823 MYH2Q9UKX2 1941 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 KIF28PB7ZC32 967 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 ORC4O43929 436 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 RXRAP19793 462 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 CLCN1P35523 988 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 ENGASEQ8NFI3 743 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 CRNKL1Q9BZJ0 848 aaKnown RBP20.55■□□□□ 0.88
SFXN1-208ENST00000507823 NRXN2Q9P2S2 1712 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 ERICH2A1L162 156 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 NT5C2P49902 561 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 TPRNQ4KMQ1 711 aa20.55■□□□□ 0.88
SFXN1-208ENST00000507823 MINDY4BA8MYZ0 360 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 RRP12Q5JTH9 1297 aaKnown RBP20.54■□□□□ 0.88
SFXN1-208ENST00000507823 KRT40Q6A162 431 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 PROM2Q8N271 834 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 KCNG4Q8TDN1 519 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 DCP1AQ9NPI6 582 aaPredicted RBP20.54■□□□□ 0.88
SFXN1-208ENST00000507823 U2AF2P26368 475 aaKnown RBP eCLIP20.54■□□□□ 0.888e-7■■□□□ 13.8
SFXN1-208ENST00000507823 SNW1Q13573 536 aaKnown RBP20.54■□□□□ 0.88
SFXN1-208ENST00000507823 ADALQ6DHV7 355 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 NBPF11Q86T75 865 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 WASF1Q92558 559 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 RPGRQ92834 1020 aaKnown RBP20.54■□□□□ 0.88
SFXN1-208ENST00000507823 MYL10Q9BUA6 226 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 GJB4Q9NTQ9 266 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 ANKIB1Q9P2G1 1089 aa20.54■□□□□ 0.88
SFXN1-208ENST00000507823 CCDC196A0A1B0GTZ2 297 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 POLRMTO00411 1230 aaKnown RBP20.53■□□□□ 0.88
SFXN1-208ENST00000507823 DDR1Q08345 913 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 RTN1Q16799 776 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 PHKBQ93100 1093 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 RBM17Q96I25 401 aaKnown RBP20.53■□□□□ 0.88
SFXN1-208ENST00000507823 PODXL2Q9NZ53 605 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 CTAGE5O15320 804 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 BBOX1O75936 387 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 TRIM37O94972 964 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 CEBPZQ03701 1054 aaKnown RBP20.53■□□□□ 0.88
SFXN1-208ENST00000507823 TYRO3Q06418 890 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 SSRP1Q08945 709 aaKnown RBP20.53■□□□□ 0.88
SFXN1-208ENST00000507823 CHAF1AQ13111 956 aaPredicted RBP20.53■□□□□ 0.88
SFXN1-208ENST00000507823 CCAR1Q8IX12 1150 aaKnown RBP20.53■□□□□ 0.88
SFXN1-208ENST00000507823 ZNF654Q8IZM8 581 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 AIFM3Q96NN9 605 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 UBAC1Q9BSL1 405 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 GOLPH3LQ9H4A5 285 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 MRVI1Q9Y6F6 885 aa20.53■□□□□ 0.88
SFXN1-208ENST00000507823 ZNF804AQ7Z570 1209 aa20.52■□□□□ 0.88
SFXN1-208ENST00000507823 ARPP21Q9UBL0 812 aaPredicted RBP20.52■□□□□ 0.88
SFXN1-208ENST00000507823 MKRN1Q9UHC7 482 aaKnown RBP20.52■□□□□ 0.88
SFXN1-208ENST00000507823 PCDHA7Q9UN72 937 aa20.52■□□□□ 0.88
SFXN1-208ENST00000507823 TNKSO95271 1327 aa20.52■□□□□ 0.88
SFXN1-208ENST00000507823 SMIM22K7EJ46 135 aa20.52■□□□□ 0.87
SFXN1-208ENST00000507823 GPSM2P81274 684 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms