RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 SMARCE1Q969G3 411 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 NUP88Q99567 741 aaPredicted RBP10.99□□□□□ -0.65
PHF3-208ENST00000506783 RNASE9P60153 205 aaKnown RBP10.99□□□□□ -0.65
PHF3-208ENST00000506783 DNAJC21Q5F1R6 531 aaKnown RBP10.99□□□□□ -0.65
PHF3-208ENST00000506783 ARMCX5Q6P1M9 558 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 QTRT2Q9H974 415 aaKnown RBP10.99□□□□□ -0.65
PHF3-208ENST00000506783 POLD4Q9HCU8 107 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 A0A0U1RQJ8 604 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 GOLGA8HP0CJ92 632 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 ADALQ6DHV7 355 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 ILDR1Q86SU0 546 aaPredicted RBP10.99□□□□□ -0.65
PHF3-208ENST00000506783 ATRIPQ8WXE1 791 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 PIGBQ92521 554 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 NACAP1Q9BZK3 213 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 HELLSQ9NRZ9 838 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 AATFQ9NY61 560 aaKnown RBP eCLIP10.99□□□□□ -0.65
PHF3-208ENST00000506783 C3P01024 1663 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 NEDD4P46934 1319 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 WDR17Q8IZU2 1322 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 CTAGE5O15320 804 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 KCNQ2O43526 872 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 CASQ1P31415 396 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 EVCP57679 992 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 NLRP5P59047 1200 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 RAD51AP2Q09MP3 1159 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 LCORLQ8N3X6 602 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 VIRMAQ69YN4 1812 aaKnown RBP10.98□□□□□ -0.65
PHF3-208ENST00000506783 PCDH11XQ9BZA7 1347 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 PCDH11YQ9BZA8 1340 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 CLSTN1O94985 981 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 ANTXR2P58335 489 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 TCIRG1Q13488 830 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 APOA5Q6Q788 366 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 SAP30BPQ9UHR5 308 aaKnown RBP10.98□□□□□ -0.65
PHF3-208ENST00000506783 GUCA1BQ9UMX6 200 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 ENC1O14682 589 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 N4BP3O15049 544 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 IGHMBP2P38935 993 aaKnown RBP10.98□□□□□ -0.65
PHF3-208ENST00000506783 LMAN1P49257 510 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 KIF23Q02241 960 aaPredicted RBP10.98□□□□□ -0.65
PHF3-208ENST00000506783 PDE4BQ07343 736 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 PIK3AP1Q6ZUJ8 805 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 PLA2G4DQ86XP0 818 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 PLCD3Q8N3E9 789 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 GPKOWQ92917 476 aaPredicted RBP eCLIP10.98□□□□□ -0.65
PHF3-208ENST00000506783 PPP1R13BQ96KQ4 1090 aa10.98□□□□□ -0.65
PHF3-208ENST00000506783 G3V3G9 751 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 ZNF569Q5MCW4 686 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 RRAGBQ5VZM2 374 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 CCDC191Q8NCU4 936 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 PAXBP1Q9Y5B6 917 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 MROH7-TTC4A0A0A0MT08 1334 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 ZSCAN20P17040 1043 aaPredicted RBP10.97□□□□□ -0.65
PHF3-208ENST00000506783 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
PHF3-208ENST00000506783 CERKQ8TCT0 537 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 TSPY2A6NKD2 308 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 MYL5Q02045 173 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 ARID5AQ03989 594 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 IFNL3Q8IZI9 196 aa10.97□□□□□ -0.65
PHF3-208ENST00000506783 SOWAHDA6NJG2 315 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 TEX33O43247 280 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 SHC4Q6S5L8 630 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 KRT222Q8N1A0 295 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 CAGE1Q8TC20 777 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 CARD10Q9BWT7 1032 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 TAB2Q9NYJ8 693 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 CEMIPQ8WUJ3 1361 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 RASGRF1Q13972 1273 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 E4F1Q66K89 784 aaPredicted RBP10.96□□□□□ -0.65
PHF3-208ENST00000506783 NAA16Q6N069 864 aaPredicted RBP10.96□□□□□ -0.65
PHF3-208ENST00000506783 SLC51AQ86UW1 340 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 BAG1Q99933 345 aaPredicted RBP10.96□□□□□ -0.65
PHF3-208ENST00000506783 NOL10Q9BSC4 688 aaKnown RBP10.96□□□□□ -0.65
PHF3-208ENST00000506783 DSCC1Q9BVC3 393 aa10.96□□□□□ -0.65
PHF3-208ENST00000506783 H7C1W4 665 aa10.96□□□□□ -0.66
PHF3-208ENST00000506783 EPB41L2O43491 1005 aaKnown RBP10.96□□□□□ -0.66
PHF3-208ENST00000506783 CDKL5O76039 1030 aa10.96□□□□□ -0.66
PHF3-208ENST00000506783 IDEP14735 1019 aa10.96□□□□□ -0.66
PHF3-208ENST00000506783 IFIT1BQ5T764 474 aaKnown RBP10.96□□□□□ -0.66
PHF3-208ENST00000506783 TOGARAM2Q6ZUX3 1019 aa10.96□□□□□ -0.66
PHF3-208ENST00000506783 SPATA5Q8NB90 893 aa10.96□□□□□ -0.66
PHF3-208ENST00000506783 BABAM1Q9NWV8 329 aa10.96□□□□□ -0.66
PHF3-208ENST00000506783 DIP2AQ14689 1571 aa10.96□□□□□ -0.66
PHF3-208ENST00000506783 ANKARQ7Z5J8 1434 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 USP17L12C9JPN9 530 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 USP17L21D6R901 530 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 SLC5A1P13866 664 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 SF3B2Q13435 895 aaKnown RBP10.95□□□□□ -0.66
PHF3-208ENST00000506783 SLF1Q9BQI6 1058 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 CSRNP2Q9H175 543 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 CENPHQ9H3R5 247 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 ANKIB1Q9P2G1 1089 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 CTNND2Q9UQB3 1225 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 TTLL11Q8NHH1 800 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 TANGO6Q9C0B7 1094 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 SUGCTQ9HAC7 445 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 SPTLC3Q9NUV7 552 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 ARGLU1Q9NWB6 273 aaPredicted RBP10.95□□□□□ -0.66
PHF3-208ENST00000506783 TECPR2O15040 1411 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms