RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 OBP2AQ9NY56 170 aa6.67□□□□□ -1.34
HMGB3P10-201ENST00000434734 ZNF180Q9UJW8 692 aa6.67□□□□□ -1.34
HMGB3P10-201ENST00000434734 ZNF232Q9UNY5 417 aa6.67□□□□□ -1.34
HMGB3P10-201ENST00000434734 CHMP3Q9Y3E7 222 aa6.67□□□□□ -1.34
HMGB3P10-201ENST00000434734 PPP2R3BQ9Y5P8 575 aa6.67□□□□□ -1.34
HMGB3P10-201ENST00000434734 DYTNA2CJ06 578 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 ADCY3O60266 1144 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 PPFIA3O75145 1194 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 GMPRP36959 345 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 CTSOP43234 321 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 FCGRTP55899 365 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 POU5F1Q01860 360 aaKnown RBP6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 TCIRG1Q13488 830 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 GFOD2Q3B7J2 385 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 L1TD1Q5T7N2 865 aaKnown RBP6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 ICE2Q659A1 982 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 CCDC174Q6PII3 467 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 FAM196AQ6ZSG2 479 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 HDGFL2Q7Z4V5 671 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 ZBTB46Q86UZ6 589 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 LSRQ86X29 649 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 TEX19Q8NA77 164 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 ANKRD24Q8TF21 1146 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 FERD3LQ96RJ6 166 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 RHOBTB2Q9BYZ6 727 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 CHRDQ9H2X0 955 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 STK17AQ9UEE5 414 aa6.66□□□□□ -1.34
HMGB3P10-201ENST00000434734 EREGO14944 169 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 PIP5K1CO60331 668 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 RAPGEF3O95398 923 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 PGRP06401 933 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 TRIM27P14373 513 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 TFE3P19532 575 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 COPB2P35606 906 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 VEGFBP49765 207 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 LMNB2Q03252 620 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 PTSQ03393 145 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 TEAD4Q15561 434 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 TRIP4Q15650 581 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 PPP2R5EQ16537 467 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 SLC4A8Q2Y0W8 1093 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 CNNM4Q6P4Q7 775 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 RINLQ6ZS11 566 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 ZNF438Q7Z4V0 828 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 ANKRD42Q8N9B4 389 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 KDF1Q8NAX2 398 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 NGDNQ8NEJ9 315 aaKnown RBP6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 ST13P5Q8NFI4 369 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 RNF217Q8TC41 542 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 CLUHP3Q96NS8 147 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 POLMQ9NP87 494 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 NGRNQ9NPE2 291 aaKnown RBP6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 SLC5A4Q9NY91 659 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 TMEM63CQ9P1W3 806 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 USP25Q9UHP3 1055 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 MAPRE3Q9UPY8 281 aa6.65□□□□□ -1.34
HMGB3P10-201ENST00000434734 ERBB4Q15303 1308 aa6.65□□□□□ -1.35
HMGB3P10-201ENST00000434734 PHLDB1Q86UU1 1377 aa6.65□□□□□ -1.35
HMGB3P10-201ENST00000434734 GOLGA6CA6NDK9 693 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 GOLGA6BA6NDN3 693 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 FIGNL2A6NMB9 653 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 UPK3BL1B0FP48 263 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 UPK3BL2E5RIL1 263 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 CDK2AP1O14519 115 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 MICAL2O94851 1124 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 ABLIM3O94929 683 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 IL2RAP01589 272 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 RPLP1P05386 114 aaKnown RBP6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 GOLGA6DP0CG33 693 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 MCM4P33991 863 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 GPC1P35052 558 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 RNF144AP50876 292 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 TLR1Q15399 786 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 FOXB2Q5VYV0 432 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 CCDC70Q6NSX1 233 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 TPTE2Q6XPS3 522 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 RUFY4Q6ZNE9 571 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 CYP2U1Q7Z449 544 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 PASD1Q8IV76 773 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 FBXO41Q8TF61 875 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 JPH3Q8WXH2 748 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 CHMP4CQ96CF2 233 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 CRBNQ96SW2 442 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 ZNF395Q9H8N7 513 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 OSGEPQ9NPF4 335 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 LATS2Q9NRM7 1088 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 GOLGA6AQ9NYA3 693 aa6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 PUF60Q9UHX1 559 aaKnown RBP6.64□□□□□ -1.35
HMGB3P10-201ENST00000434734 FAM83GA6ND36 823 aa6.63□□□□□ -1.35
HMGB3P10-201ENST00000434734 RASSF10A6NK89 507 aa6.63□□□□□ -1.35
HMGB3P10-201ENST00000434734 PRSS47A8MTI9 375 aa6.63□□□□□ -1.35
HMGB3P10-201ENST00000434734 RFPL3O75679 317 aa6.63□□□□□ -1.35
HMGB3P10-201ENST00000434734 RNASEH2AO75792 299 aaKnown RBP6.63□□□□□ -1.35
HMGB3P10-201ENST00000434734 F13A1P00488 732 aa6.63□□□□□ -1.35
HMGB3P10-201ENST00000434734 NBPF7P0C2Y1 421 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P10-201ENST00000434734 EPB42P16452 691 aa6.63□□□□□ -1.35
HMGB3P10-201ENST00000434734 SDSP20132 328 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms