RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 SMTNL1A8MU46 457 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 SMIM22K7EJ46 135 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 ATP2B1P20020 1258 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 ATP6V1AP38606 617 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 SSRP1Q08945 709 aaKnown RBP21.39■■□□□ 1.01
CHD1L-204ENST00000431239 PTPAQ15257 358 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 AKNAD1Q5T1N1 836 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 PDCL2Q8N4E4 241 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 LRP2BPQ9P2M1 347 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 WTIPA6NIX2 430 aaPredicted RBP21.38■■□□□ 1.01
CHD1L-204ENST00000431239 BTBD18B2RXH4 712 aa21.38■■□□□ 1.01
CHD1L-204ENST00000431239 NUP133Q8WUM0 1156 aa21.38■■□□□ 1.01
CHD1L-204ENST00000431239 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.38■■□□□ 1.01
CHD1L-204ENST00000431239 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
CHD1L-204ENST00000431239 CRKLP46109 303 aaKnown RBP21.38■■□□□ 1.01
CHD1L-204ENST00000431239 HSP90AA4PQ58FG1 418 aa21.38■■□□□ 1.01
CHD1L-204ENST00000431239 SGMS1Q86VZ5 419 aa21.38■■□□□ 1.01
CHD1L-204ENST00000431239 MAP3K14Q99558 947 aa21.38■■□□□ 1.01
CHD1L-204ENST00000431239 UTP14AQ9BVJ6 771 aaKnown RBP21.38■■□□□ 1.01
CHD1L-204ENST00000431239 ABCF2Q9UG63 623 aa21.38■■□□□ 1.01
CHD1L-204ENST00000431239 CTIFO43310 598 aaKnown RBP21.37■■□□□ 1.01
CHD1L-204ENST00000431239 RBM6P78332 1123 aaKnown RBP21.37■■□□□ 1.01
CHD1L-204ENST00000431239 NCAPHQ15003 741 aa21.37■■□□□ 1.01
CHD1L-204ENST00000431239 PTPN14Q15678 1187 aa21.37■■□□□ 1.01
CHD1L-204ENST00000431239 ECM29Q5VYK3 1845 aa21.37■■□□□ 1.01
CHD1L-204ENST00000431239 NEMFO60524 1076 aa21.37■■□□□ 1.01
CHD1L-204ENST00000431239 SDR42E1Q8WUS8 393 aa21.37■■□□□ 1.01
CHD1L-204ENST00000431239 NIP7Q9Y221 180 aaKnown RBP eCLIP21.37■■□□□ 1.01
CHD1L-204ENST00000431239 MINDY4BA8MYZ0 360 aa21.36■■□□□ 1.01
CHD1L-204ENST00000431239 EIF5P55010 431 aaKnown RBP21.36■■□□□ 1.01
CHD1L-204ENST00000431239 CBX1P83916 185 aa21.36■■□□□ 1.01
CHD1L-204ENST00000431239 NCBP1Q09161 790 aaKnown RBP21.36■■□□□ 1.01
CHD1L-204ENST00000431239 INTS5Q6P9B9 1019 aaKnown RBP21.36■■□□□ 1.01
CHD1L-204ENST00000431239 JMYQ8N9B5 988 aa21.36■■□□□ 1.01
CHD1L-204ENST00000431239 SPDYE4A6NLX3 237 aa21.36■■□□□ 1.01
CHD1L-204ENST00000431239 FOXN1O15353 648 aa21.36■■□□□ 1.01
CHD1L-204ENST00000431239 LONRF3Q496Y0 759 aa21.36■■□□□ 1.01
CHD1L-204ENST00000431239 CCDC87Q9NVE4 849 aa21.36■■□□□ 1.01
CHD1L-204ENST00000431239 IGHMBP2P38935 993 aaKnown RBP21.35■■□□□ 1.01
CHD1L-204ENST00000431239 GRIN1Q05586 938 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHD1L-204ENST00000431239 V9GYY5 206 aaPredicted RBP21.35■■□□□ 1.01
CHD1L-204ENST00000431239 ADAMTS2O95450 1211 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 U2AF2P26368 475 aaKnown RBP eCLIP21.35■■□□□ 1.013e-7■■■□□ 14.6
CHD1L-204ENST00000431239 TPM4P67936 248 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 WTAPQ15007 396 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 ALX1Q15699 326 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 ARMCX5Q6P1M9 558 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 ADGRA1Q86SQ6 560 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 LIFRP42702 1097 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 NR5A1Q13285 461 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 RTN1Q16799 776 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 DIS3L2Q8IYB7 885 aaKnown RBP21.35■■□□□ 1.01
CHD1L-204ENST00000431239 CCAR2Q8N163 923 aaKnown RBP21.35■■□□□ 1.01
CHD1L-204ENST00000431239 HPSEQ9Y251 543 aa21.35■■□□□ 1.01
CHD1L-204ENST00000431239 CHD4Q14839 1912 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 CHRNDQ07001 517 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 METTL16Q86W50 562 aaKnown RBP21.34■■□□□ 1.01
CHD1L-204ENST00000431239 BPIFA3Q9BQP9 254 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 NACAP1Q9BZK3 213 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 PPP6R2O75170 966 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 GSDMDP57764 484 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 FANCCQ00597 558 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 CCDC152Q4G0S7 254 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 NOSTRINQ8IVI9 506 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 CNNM3Q8NE01 707 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 KRT23Q9C075 422 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 CNNM2Q9H8M5 875 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 KCNH3Q9ULD8 1083 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 PAXBP1Q9Y5B6 917 aa21.34■■□□□ 1.01
CHD1L-204ENST00000431239 FMNL1O95466 1100 aaPredicted RBP21.33■■□□□ 1.01
CHD1L-204ENST00000431239 SFPQP23246 707 aaKnown RBP eCLIP21.33■■□□□ 1.01
CHD1L-204ENST00000431239 RESP18Q5W5W9 173 aa21.33■■□□□ 1.01
CHD1L-204ENST00000431239 ANKRD7Q92527 254 aa21.33■■□□□ 1.01
CHD1L-204ENST00000431239 hCG_1642624A0A1W2PR95 340 aa21.33■■□□□ 1
CHD1L-204ENST00000431239 CYP7A1P22680 504 aa21.33■■□□□ 1
CHD1L-204ENST00000431239 GYG1P46976 350 aa21.33■■□□□ 1
CHD1L-204ENST00000431239 DPF2Q92785 391 aa21.33■■□□□ 1
CHD1L-204ENST00000431239 NHSL1Q5SYE7 1610 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 ERICH2A1L162 156 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 GOLGA8FQ08AF8 430 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 GOLGA8DPQ0D2H9 430 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 ITPK1Q13572 414 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 SART3Q15020 963 aaKnown RBP21.32■■□□□ 1
CHD1L-204ENST00000431239 HSD3B7Q9H2F3 369 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 RAI14Q9P0K7 980 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 DOT1LQ8TEK3 1739 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 LRP5O75197 1615 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 CAMTA2O94983 1202 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 NYAP1Q6ZVC0 841 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 FOXP4Q8IVH2 680 aaPredicted RBP21.32■■□□□ 1
CHD1L-204ENST00000431239 TRIM22Q8IYM9 498 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 PDILTQ8N807 584 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 OSBPL5Q9H0X9 879 aaPredicted RBP21.32■■□□□ 1
CHD1L-204ENST00000431239 SERPINC1P01008 464 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 IFNAR1P17181 557 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 TOB1P50616 345 aaPredicted RBP21.32■■□□□ 1
CHD1L-204ENST00000431239 SAFBQ15424 915 aaKnown RBP eCLIP21.32■■□□□ 1
CHD1L-204ENST00000431239 PCDHA5Q9Y5H7 936 aa21.32■■□□□ 1
CHD1L-204ENST00000431239 LOC102724428A0A0B4J2F2 783 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms