RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 FCGRTP55899 365 aa7.97□□□□□ -1.13
LINC00348-201ENST00000428761 EGFLAMQ63HQ2 1017 aa7.97□□□□□ -1.13
LINC00348-201ENST00000428761 SDE2Q6IQ49 451 aa7.97□□□□□ -1.13
LINC00348-201ENST00000428761 ZNF746Q6NUN9 644 aaPredicted RBP7.97□□□□□ -1.13
LINC00348-201ENST00000428761 ANKRD24Q8TF21 1146 aa7.97□□□□□ -1.13
LINC00348-201ENST00000428761 SEC16BQ96JE7 1060 aa7.97□□□□□ -1.13
LINC00348-201ENST00000428761 ERCC6Q03468 1493 aa7.97□□□□□ -1.13
LINC00348-201ENST00000428761 MAOBP27338 520 aa7.96□□□□□ -1.14
LINC00348-201ENST00000428761 GSTT1P30711 240 aa7.96□□□□□ -1.14
LINC00348-201ENST00000428761 EXOSC6Q5RKV6 272 aaKnown RBP7.96□□□□□ -1.14
LINC00348-201ENST00000428761 NBPF6Q5VWK0 638 aa7.96□□□□□ -1.14
LINC00348-201ENST00000428761 ANKRD34AQ69YU3 496 aa7.96□□□□□ -1.14
LINC00348-201ENST00000428761 DTHD1Q6ZMT9 781 aa7.96□□□□□ -1.14
LINC00348-201ENST00000428761 SLC51AQ86UW1 340 aa7.96□□□□□ -1.14
LINC00348-201ENST00000428761 NBPF4Q96M43 638 aa7.96□□□□□ -1.14
LINC00348-201ENST00000428761 KBTBD4Q9NVX7 518 aa7.96□□□□□ -1.14
LINC00348-201ENST00000428761 ECEL1O95672 775 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 CYP11A1P05108 521 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 PREPP48147 710 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 ZNF157P51786 506 aaPredicted RBP7.95□□□□□ -1.14
LINC00348-201ENST00000428761 POU4F3Q15319 338 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 NUTM2GQ5VZR2 741 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 SMG8Q8ND04 991 aaKnown RBP7.95□□□□□ -1.14
LINC00348-201ENST00000428761 C3orf58Q8NDZ4 430 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 KRTAP9-9Q9BYP9 154 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 KRTAP9-4Q9BYQ2 154 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 SUGCTQ9HAC7 445 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 SBNO2Q9Y2G9 1366 aa7.95□□□□□ -1.14
LINC00348-201ENST00000428761 XRCC5P13010 732 aaKnown RBP7.94□□□□□ -1.14
LINC00348-201ENST00000428761 PWP1Q13610 501 aa7.94□□□□□ -1.14
LINC00348-201ENST00000428761 UVSSAQ2YD98 709 aa7.94□□□□□ -1.14
LINC00348-201ENST00000428761 NLGN1Q8N2Q7 840 aa7.94□□□□□ -1.14
LINC00348-201ENST00000428761 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
LINC00348-201ENST00000428761 SPON2Q9BUD6 331 aa7.94□□□□□ -1.14
LINC00348-201ENST00000428761 ZFYVE1Q9HBF4 777 aa7.94□□□□□ -1.14
LINC00348-201ENST00000428761 COL17A1Q9UMD9 1497 aaPredicted RBP7.94□□□□□ -1.14
LINC00348-201ENST00000428761 PAX4O43316 350 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 TIAF1O95411 115 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 DRD2P14416 443 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 CD97P48960 835 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 FDX2Q6P4F2 183 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 C12orf50Q8NA57 414 aaPredicted RBP7.93□□□□□ -1.14
LINC00348-201ENST00000428761 UTP4Q969X6 686 aaKnown RBP7.93□□□□□ -1.14
LINC00348-201ENST00000428761 MYRFLQ96LU7 910 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 ADAMTS1Q9UHI8 967 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 AKAP2Q9Y2D5 859 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 RAXQ9Y2V3 346 aa7.93□□□□□ -1.14
LINC00348-201ENST00000428761 DHX15O43143 795 aaKnown RBP7.92□□□□□ -1.14
LINC00348-201ENST00000428761 SART1O43290 800 aaKnown RBP7.92□□□□□ -1.14
LINC00348-201ENST00000428761 SERINC3Q13530 473 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 NFE2L2Q16236 605 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 KIAA0825Q8IV33 1275 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 FAM20CQ8IXL6 584 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 CKAP2LQ8IYA6 745 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 MKL1Q969V6 931 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 CYP4F12Q9HCS2 524 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 KCNQ5Q9NR82 932 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 STOML1Q9UBI4 398 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 PPM1HQ9ULR3 514 aa7.92□□□□□ -1.14
LINC00348-201ENST00000428761 IRAK1P51617 712 aa7.91□□□□□ -1.14
LINC00348-201ENST00000428761 AP3B2Q13367 1082 aa7.91□□□□□ -1.14
LINC00348-201ENST00000428761 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.91□□□□□ -1.14
LINC00348-201ENST00000428761 RELL1Q8IUW5 271 aa7.91□□□□□ -1.14
LINC00348-201ENST00000428761 TMEM74Q96NL1 305 aa7.91□□□□□ -1.14
LINC00348-201ENST00000428761 CORO1BQ9BR76 489 aa7.91□□□□□ -1.14
LINC00348-201ENST00000428761 TMEM39AQ9NV64 488 aa7.91□□□□□ -1.14
LINC00348-201ENST00000428761 TTF2Q9UNY4 1162 aaKnown RBP7.91□□□□□ -1.14
LINC00348-201ENST00000428761 MED26O95402 600 aa7.9□□□□□ -1.14
LINC00348-201ENST00000428761 TGFB1P01137 390 aa7.9□□□□□ -1.14
LINC00348-201ENST00000428761 IGLV1-40P01703 118 aa7.9□□□□□ -1.14
LINC00348-201ENST00000428761 RLBP1P12271 317 aa7.9□□□□□ -1.14
LINC00348-201ENST00000428761 BMP3P12645 472 aa7.9□□□□□ -1.14
LINC00348-201ENST00000428761 SOX4Q06945 474 aaPredicted RBP7.9□□□□□ -1.14
LINC00348-201ENST00000428761 BMS1Q14692 1282 aaKnown RBP7.9□□□□□ -1.14
LINC00348-201ENST00000428761 JAZF1Q86VZ6 243 aa7.9□□□□□ -1.14
LINC00348-201ENST00000428761 GSC2O15499 205 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 COBLO75128 1261 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 EIF4A3P38919 411 aaKnown RBP7.89□□□□□ -1.15
LINC00348-201ENST00000428761 TXKP42681 527 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 TCEAL1Q15170 157 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 CCDC85BQ15834 202 aaPredicted RBP7.89□□□□□ -1.15
LINC00348-201ENST00000428761 CLEC10AQ8IUN9 316 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 TRIM42Q8IWZ5 723 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 C2CD4AQ8NCU7 369 aaPredicted RBP7.89□□□□□ -1.15
LINC00348-201ENST00000428761 STK35Q8TDR2 534 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 EAF1Q96JC9 268 aaPredicted RBP7.89□□□□□ -1.15
LINC00348-201ENST00000428761 FAM83CQ9BQN1 747 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 NT5C1AQ9BXI3 368 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 ZNF408Q9H9D4 720 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 GPN3Q9UHW5 284 aaPredicted RBP7.89□□□□□ -1.15
LINC00348-201ENST00000428761 STRIP2Q9ULQ0 834 aa7.89□□□□□ -1.15
LINC00348-201ENST00000428761 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.89□□□□□ -1.15
LINC00348-201ENST00000428761 HMX2A2RU54 273 aa7.88□□□□□ -1.15
LINC00348-201ENST00000428761 SSBP05455 408 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC00348-201ENST00000428761 SOX9P48436 509 aa7.88□□□□□ -1.15
LINC00348-201ENST00000428761 NASPP49321 788 aaPredicted RBP7.88□□□□□ -1.15
LINC00348-201ENST00000428761 PPP2R3AQ06190 1150 aa7.88□□□□□ -1.15
LINC00348-201ENST00000428761 COL9A2Q14055 689 aaPredicted RBP7.88□□□□□ -1.15
LINC00348-201ENST00000428761 SGO2Q562F6 1265 aa7.88□□□□□ -1.15
LINC00348-201ENST00000428761 SV2BQ7L1I2 683 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms