RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CKAP2LQ8IYA6 745 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 IFNL3Q8IZI9 196 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 BRIP1Q9BX63 1249 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 LSG1Q9H089 658 aaKnown RBP11.22□□□□□ -0.61
CMSS1-201ENST00000421999 PXDNLA1KZ92 1463 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 CHRNA5P30532 468 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
CMSS1-201ENST00000421999 SCARF1Q14162 830 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.61
CMSS1-201ENST00000421999 CCDC93Q567U6 631 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 SCAND2PQ9GZW5 306 aaPredicted RBP11.21□□□□□ -0.61
CMSS1-201ENST00000421999 TMOD4Q9NZQ9 345 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 TCP10L2B9ZVM9 353 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 ZNF592Q92610 1267 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 HOOK2Q96ED9 719 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.61
CMSS1-201ENST00000421999 SERPINC1P01008 464 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 GYS1P13807 737 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 SYCP1Q15431 976 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 SLC15A2Q16348 729 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.62
CMSS1-201ENST00000421999 CCDC148Q8NFR7 591 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 MAP4K1Q92918 833 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 NCOA5Q9HCD5 579 aaKnown RBP11.21□□□□□ -0.62
CMSS1-201ENST00000421999 CYP2E1P05181 493 aaPredicted RBP11.21□□□□□ -0.62
CMSS1-201ENST00000421999 ADD2P35612 726 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.62
CMSS1-201ENST00000421999 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 NUP62CLQ9H1M0 184 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 PIM2Q9P1W9 311 aa11.21□□□□□ -0.62
CMSS1-201ENST00000421999 TOPAZ1Q8N9V7 1692 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 SPDYE3A6NKU9 549 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 M0R2C6 588 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 CCDC192P0DO97 292 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 USP48Q86UV5 1035 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 CPXCR1Q8N123 301 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 SEMA3EO15041 775 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 PRKAB2O43741 272 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 CSADQ9Y600 493 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 CLRN2A0PK11 232 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
CMSS1-201ENST00000421999 DCPSQ96C86 337 aaKnown RBP11.2□□□□□ -0.62
CMSS1-201ENST00000421999 MYL10Q9BUA6 226 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
CMSS1-201ENST00000421999 CALM1P0DP23 149 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 CALM2P0DP24 149 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 CALM3P0DP25 149 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 BTDP43251 543 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 CAMK4Q16566 473 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 PAF1Q8N7H5 531 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 RRP36Q96EU6 259 aaKnown RBP11.19□□□□□ -0.62
CMSS1-201ENST00000421999 SPON1Q9HCB6 807 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 ANGEL1Q9UNK9 670 aaKnown RBP11.19□□□□□ -0.62
CMSS1-201ENST00000421999 PHLPP1O60346 1717 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 CYP21A2P08686 494 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 PRDX5P30044 214 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 SP4Q02446 784 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 SLC1A4P43007 532 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 PPARAQ07869 468 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 FAM47AQ5JRC9 791 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 LRRC4BQ9NT99 713 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 IVNS1ABPQ9Y6Y0 642 aa11.19□□□□□ -0.62
CMSS1-201ENST00000421999 PARP1P09874 1014 aaKnown RBP11.18□□□□□ -0.62
CMSS1-201ENST00000421999 IL27Q8NEV9 243 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-201ENST00000421999 RGS12O14924 1447 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 B4DLN1 442 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 PPP1R12BO60237 982 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-201ENST00000421999 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
CMSS1-201ENST00000421999 GPSM2P81274 684 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 LCORLQ8N3X6 602 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 FAM84BQ96KN1 310 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-201ENST00000421999 PLEKHG2Q9H7P9 1386 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 CALML4Q96GE6 196 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 TSPY26PQ9H489 355 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 C6orf50Q9HD87 102 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
CMSS1-201ENST00000421999 ZSCAN22P10073 491 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-201ENST00000421999 TFAP4Q01664 338 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 CC2D2BQ6DHV5 1058 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 TM6SF1Q9BZW5 370 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 TAOK3Q9H2K8 898 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 CD209Q9NNX6 404 aa11.18□□□□□ -0.62
CMSS1-201ENST00000421999 A0A0G2JLW4 131 aa11.17□□□□□ -0.62
CMSS1-201ENST00000421999 A0A0U1RQG5 324 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-201ENST00000421999 CHGBP05060 677 aa11.17□□□□□ -0.62
CMSS1-201ENST00000421999 MECOMQ03112 1051 aa11.17□□□□□ -0.62
CMSS1-201ENST00000421999 NASPP49321 788 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-201ENST00000421999 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
CMSS1-201ENST00000421999 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
CMSS1-201ENST00000421999 IRX3P78415 501 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 247.3 ms