RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 MRPL50Q8N5N7 158 aaKnown RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 EVA1BQ9NVM1 165 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 LUZP4Q9P127 313 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 ZBTB21Q9ULJ3 1066 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 SMTNL1A8MU46 457 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 WASLO00401 505 aaPredicted RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 F2P00734 622 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 MAPK10P53779 464 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 ANO4Q32M45 955 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 UBE2R2Q712K3 238 aaPredicted RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 NBPF15Q8N660 670 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 CNTD1Q8N815 330 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 ENOX1Q8TC92 643 aaKnown RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 NUP133Q8WUM0 1156 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 POF1BQ8WVV4 589 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 SECISBP2LQ93073 1101 aaKnown RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 CHMP4CQ96CF2 233 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 MYD88Q99836 296 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 QTRT2Q9H974 415 aaKnown RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 RRN3Q9NYV6 651 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 WASHC2AQ641Q2 1341 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 JMJD7P0C870 316 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PHKA2P46019 1235 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PLA2G4AP47712 749 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 MCL1Q07820 350 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 CHRDL2Q6WN34 429 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 LRRTM3Q86VH5 581 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 LCA5Q86VQ0 697 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 GJD3Q8N144 294 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 LRRC47Q8N1G4 583 aaKnown RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 RUBCNQ92622 972 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 NINJ1Q92982 152 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 L3MBTL2Q969R5 705 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 COL26A1Q96A83 441 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 TNKS2Q9H2K2 1166 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 NAP1L2Q9ULW6 460 aaPredicted RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 MAP4K5Q9Y4K4 846 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 SNX13Q9Y5W8 968 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 LRRC10BA6NIK2 292 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 TNFRSF21O75509 655 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 MBD4O95243 580 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 TP53P04637 393 aaPredicted RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 EFCAB2Q5VUJ9 269 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 C11orf74Q86VG3 221 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 DGKHQ86XP1 1220 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 NGDNQ8NEJ9 315 aaKnown RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 USP33Q8TEY7 942 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 UCMAQ8WVF2 138 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 SLC26A6Q9BXS9 759 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PDZRN3Q9UPQ7 1066 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PCDHGB6Q9Y5F9 930 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 EXOC5O00471 708 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 APAF1O14727 1248 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PMM2O15305 246 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PPFIA3O75145 1194 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 CELA3AP09093 270 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 IFIT1P09914 478 aaKnown RBP4.22□□□□□ -1.73
XRN1-202ENST00000392981 KRT9P35527 623 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PSEN2P49810 448 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 LIG3P49916 1009 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PLS1Q14651 629 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 IER5LQ5T953 404 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 MSL1Q68DK7 614 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 HERPUD2Q9BSE4 406 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 SRCIN1Q9C0H9 1055 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 TOMM22Q9NS69 142 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 PSDA5PKW4 1024 aaPredicted RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 TMEM229AB2RXF0 380 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 F12P00748 615 aaPredicted RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 INHAP05111 366 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 PTPN12Q05209 780 aaKnown RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 KRT26Q7Z3Y9 468 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 EHMT1Q9H9B1 1298 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 ETNK1Q9HBU6 452 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 BRMS1Q9HCU9 246 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 POLG2Q9UHN1 485 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 ZKSCAN5Q9Y2L8 839 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 GOLGA6L22H0YM25 854 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 OR2W6PQ8NHA6 318 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 OBP2AQ9NY56 170 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 PPP1R9AQ9ULJ8 1098 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 SAMM50Q9Y512 469 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 SCRIBQ14160 1630 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 KRT37O76014 449 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 ANKRD45Q5TZF3 282 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 ITPRIPL1Q6GPH6 555 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 SPICE1Q8N0Z3 855 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 AHI1Q8N157 1196 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 SLC26A8Q96RN1 970 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 ZC3H12CQ9C0D7 883 aaKnown RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 MAN1C1Q9NR34 630 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 SUCOQ9UBS9 1254 aaKnown RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 SYNDIG1LA6NDD5 238 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 IDH3AP50213 366 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 ST13P50502 369 aaKnown RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 ACBD5Q5T8D3 534 aaPredicted RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 CCDC30Q5VVM6 783 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 BNC2Q6ZN30 1099 aaPredicted RBP4.21□□□□□ -1.74
XRN1-202ENST00000392981 SYNPOQ8N3V7 929 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms