RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 GSDMDP57764 484 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 NFXL1Q6ZNB6 911 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 CCDC112Q8NEF3 446 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
BEST1-201ENST00000378043 ATP1A3P13637 1013 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 PTPN14Q15678 1187 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 RESP18Q5W5W9 173 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 CPLX2Q6PUV4 134 aaKnown RBP12.64□□□□□ -0.39
BEST1-201ENST00000378043 FOXP4Q8IVH2 680 aaPredicted RBP12.64□□□□□ -0.39
BEST1-201ENST00000378043 ZNF592Q92610 1267 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 NAPBQ9H115 298 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 IFIT3O14879 490 aaKnown RBP12.63□□□□□ -0.39
BEST1-201ENST00000378043 SMC2O95347 1197 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 LMOD1P29536 600 aaPredicted RBP12.63□□□□□ -0.39
BEST1-201ENST00000378043 EIF5P55010 431 aaKnown RBP12.63□□□□□ -0.39
BEST1-201ENST00000378043 MAP3K12Q12852 859 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 PNOCQ13519 176 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 SYCP1Q15431 976 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 AKNAD1Q5T1N1 836 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 E4F1Q66K89 784 aaPredicted RBP12.63□□□□□ -0.39
BEST1-201ENST00000378043 STK36Q9NRP7 1315 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 IKBKBO14920 756 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 SLC5A1P13866 664 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 LONRF3Q496Y0 759 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 TMC6Q7Z403 805 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 METTL16Q86W50 562 aaKnown RBP12.63□□□□□ -0.39
BEST1-201ENST00000378043 LCORLQ8N3X6 602 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 SLC26A6Q9BXS9 759 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
BEST1-201ENST00000378043 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
BEST1-201ENST00000378043 IFNAR1P17181 557 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
BEST1-201ENST00000378043 BCAMP50895 628 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
BEST1-201ENST00000378043 AK7Q96M32 723 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 DOT1LQ8TEK3 1739 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 COL4A1P02462 1669 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 NID2Q14112 1375 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 MYH14Q7Z406 1995 aaKnown RBP12.62□□□□□ -0.39
BEST1-201ENST00000378043 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 FANCCQ00597 558 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
BEST1-201ENST00000378043 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 ZKSCAN3Q9BRR0 538 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
BEST1-201ENST00000378043 BMP6P22004 513 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 CBX1P83916 185 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
BEST1-201ENST00000378043 NOSTRINQ8IVI9 506 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 STK11IPQ8N1F8 1099 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 DPF2Q92785 391 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 EXOC5O00471 708 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 CUTAO60888 179 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 GRIN1Q05586 938 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 TRIM29Q14134 588 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 SMAP1Q8IYB5 467 aaPredicted RBP12.61□□□□□ -0.39
BEST1-201ENST00000378043 STAG1Q8WVM7 1258 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 KCNH3Q9ULD8 1083 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 MYH6P13533 1939 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
BEST1-201ENST00000378043 PNPLA7Q6ZV29 1317 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 FOXN1O15353 648 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 MMP1P03956 469 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 MDM2Q00987 491 aaPredicted RBP12.61□□□□□ -0.39
BEST1-201ENST00000378043 SPECC1Q5M775 1068 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 KRBA2Q6ZNG9 492 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 CMTR1Q8N1G2 835 aaKnown RBP12.61□□□□□ -0.39
BEST1-201ENST00000378043 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
BEST1-201ENST00000378043 KCNJ14Q9UNX9 436 aa12.61□□□□□ -0.39
BEST1-201ENST00000378043 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 SMIM22K7EJ46 135 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 RRP12Q5JTH9 1297 aaKnown RBP12.6□□□□□ -0.39
BEST1-201ENST00000378043 ADGRA1Q86SQ6 560 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 CCDC150Q8NCX0 1101 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 KRT23Q9C075 422 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
BEST1-201ENST00000378043 PCDHA5Q9Y5H7 936 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 SLC4A4Q9Y6R1 1079 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 SFPQP23246 707 aaKnown RBP eCLIP12.6□□□□□ -0.39
BEST1-201ENST00000378043 DIS3L2Q8IYB7 885 aaKnown RBP12.6□□□□□ -0.39
BEST1-201ENST00000378043 CCDC82Q8N4S0 544 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 MIGA1Q8NAN2 632 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
BEST1-201ENST00000378043 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
BEST1-201ENST00000378043 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 MYH2Q9UKX2 1941 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 TDO2P48775 406 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 TPM4P67936 248 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 MYL5Q02045 173 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 PDE4BQ07343 736 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 KRI1Q8N9T8 703 aaKnown RBP12.59□□□□□ -0.39
BEST1-201ENST00000378043 TAF1P21675 1872 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms