RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ZKSCAN3Q9BRR0 538 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 ATG2AQ2TAZ0 1938 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 HTATSF1O43719 755 aaKnown RBP6.79□□□□□ -1.32
CD47-201ENST00000355354 SLC10A5Q5PT55 438 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 ZNF34Q8IZ26 560 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 SPTA1P02549 2419 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 NMT2O60551 498 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 NCBP1Q09161 790 aaKnown RBP6.78□□□□□ -1.32
CD47-201ENST00000355354 POLA2Q14181 598 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 CDCA8Q53HL2 280 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 ELMO3Q96BJ8 720 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 WWC3Q9ULE0 1092 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 LCTP09848 1927 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 A0A1B0GVL5 298 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 ZNF445P59923 1031 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 ST5P78524 1137 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 NCAPHQ15003 741 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 LSRQ86X29 649 aaPredicted RBP6.78□□□□□ -1.32
CD47-201ENST00000355354 HPS3Q969F9 1004 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 TRIM10Q9UDY6 481 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 HPS5Q9UPZ3 1129 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 TAF5LO75529 589 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 ADCY5O95622 1261 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 HMGB2P26583 209 aaKnown RBP6.78□□□□□ -1.32
CD47-201ENST00000355354 ATP6V1AP38606 617 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 IQCB1Q15051 598 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 ZNF790Q6PG37 636 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 DNAJC10Q8IXB1 793 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 KIAA1524Q8TCG1 905 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 RASSF10A6NK89 507 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 GNPATO15228 680 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 AMPHP49418 695 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 APOBRQ0VD83 1088 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 MKRN4PQ13434 485 aaPredicted RBP6.78□□□□□ -1.32
CD47-201ENST00000355354 TRADDQ15628 312 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 TYW1BQ6NUM6 668 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 PLEKHA4Q9H4M7 779 aa6.78□□□□□ -1.32
CD47-201ENST00000355354 COL13A1Q5TAT6 717 aaPredicted RBP6.77□□□□□ -1.32
CD47-201ENST00000355354 CLEC4GQ6UXB4 293 aa6.77□□□□□ -1.32
CD47-201ENST00000355354 XAGE3Q8WTP9 111 aa6.77□□□□□ -1.32
CD47-201ENST00000355354 TMOD3Q9NYL9 352 aa6.77□□□□□ -1.32
CD47-201ENST00000355354 FAM155AB1AL88 458 aaPredicted RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 NTSR2O95665 410 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 E4F1Q66K89 784 aaPredicted RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 N4BP1O75113 896 aaKnown RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 HSP90AB1P08238 724 aaKnown RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 TFCP2Q12800 502 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 KMT5BQ4FZB7 885 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 CCDC186Q7Z3E2 898 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 KHSRPQ92945 711 aaKnown RBP eCLIP6.77□□□□□ -1.332e-7■■■□□ 14.6
CD47-201ENST00000355354 PSMD1Q99460 953 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 RBM8AQ9Y5S9 174 aaKnown RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 ZNF541Q9H0D2 1346 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 MYH7P12883 1935 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 POLR3DP05423 398 aaPredicted RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 BRPF1P55201 1214 aaPredicted RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 RASSF7Q02833 373 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 PLCD3Q8N3E9 789 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 RIN2Q8WYP3 895 aaPredicted RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 RAPGEF4Q8WZA2 1011 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 OSBPL3Q9H4L5 887 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 UTP20O75691 2785 aaKnown RBP6.77□□□□□ -1.33
CD47-201ENST00000355354 TTC41PQ6P2S7 1318 aa6.77□□□□□ -1.33
CD47-201ENST00000355354 OFD1O75665 1012 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 PKNOX2Q96KN3 472 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 BRIP1Q9BX63 1249 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 IFT57Q9NWB7 429 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 ZNF215Q9UL58 517 aaPredicted RBP6.76□□□□□ -1.33
CD47-201ENST00000355354 CLIC4Q9Y696 253 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 CACNA1CQ13936 2221 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 CHRNA5P30532 468 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 ATP8B2P98198 1209 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 NR5A1Q13285 461 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 SPRED3Q2MJR0 410 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 NOL7Q9UMY1 257 aaKnown RBP6.76□□□□□ -1.33
CD47-201ENST00000355354 RTL9Q8NET4 1388 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 POTEIP0CG38 1075 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 POTEJP0CG39 1038 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 FMNL2Q96PY5 1086 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 GPTP24298 496 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 GJB2P29033 226 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 SCNN1DP51172 638 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 USPL1Q5W0Q7 1092 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 OXER1Q8TDS5 423 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 GDAP1L1Q96MZ0 367 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 RABEP2Q9H5N1 569 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 SMARCAL1Q9NZC9 954 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 DUSP10Q9Y6W6 482 aa6.76□□□□□ -1.33
CD47-201ENST00000355354 TSGA10IPQ3SY00 556 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 BRF1Q92994 677 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 JAKMIP1Q96N16 626 aaKnown RBP6.75□□□□□ -1.33
CD47-201ENST00000355354 P2RX7Q99572 595 aaKnown RBP6.75□□□□□ -1.33
CD47-201ENST00000355354 VPS37CA5D8V6 355 aaPredicted RBP6.75□□□□□ -1.33
CD47-201ENST00000355354 NCBP3Q53F19 620 aaKnown RBP6.75□□□□□ -1.33
CD47-201ENST00000355354 ZKSCAN5Q9Y2L8 839 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 UQCRHLA0A096LP55 91 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 UPP2O95045 317 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 UQCRHP07919 91 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms