RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SKILP12757 684 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 SLC5A1P13866 664 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
SF1-202ENST00000334944 FBXO18Q8NFZ0 1043 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 SMARCE1Q969G3 411 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 RASSF4Q9H2L5 321 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 ANGEL1Q9UNK9 670 aaKnown RBP16.03■□□□□ 0.16
SF1-202ENST00000334944 LRP6O75581 1613 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 BIN1O00499 593 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 FGFR2P21802 821 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 METAP2P50579 478 aaKnown RBP eCLIP16.03■□□□□ 0.161e-7■□□□□ 10.8
SF1-202ENST00000334944 NDUFA8P51970 172 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 BMS1Q14692 1282 aaKnown RBP16.03■□□□□ 0.16
SF1-202ENST00000334944 FAM182BQ5T319 152 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 LCORLQ8N3X6 602 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 NAPBQ9H115 298 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 EPC1Q9H2F5 836 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 CAMTA2O94983 1202 aa16.02■□□□□ 0.16
SF1-202ENST00000334944 SLU7O95391 586 aaKnown RBP16.02■□□□□ 0.16
SF1-202ENST00000334944 PNMA6AP0CW24 399 aaPredicted RBP16.02■□□□□ 0.16
SF1-202ENST00000334944 NHSL1Q5SYE7 1610 aa16.02■□□□□ 0.15
SF1-202ENST00000334944 PRR29P0C7W0 189 aa16.02■□□□□ 0.15
SF1-202ENST00000334944 ARID4AP29374 1257 aaPredicted RBP16.02■□□□□ 0.15
SF1-202ENST00000334944 GYG1P46976 350 aa16.02■□□□□ 0.15
SF1-202ENST00000334944 UBE3CQ15386 1083 aa16.02■□□□□ 0.15
SF1-202ENST00000334944 ERO1AQ96HE7 468 aa16.02■□□□□ 0.15
SF1-202ENST00000334944 SDF4Q9BRK5 362 aa16.02■□□□□ 0.15
SF1-202ENST00000334944 DHX16O60231 1041 aaKnown RBP16.01■□□□□ 0.15
SF1-202ENST00000334944 EVCP57679 992 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 RBM43Q6ZSC3 357 aaKnown RBP16.01■□□□□ 0.15
SF1-202ENST00000334944 IFNL3Q8IZI9 196 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 ALG1Q9BT22 464 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 ZSWIM5Q9P217 1185 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 LRP2BPQ9P2M1 347 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 APOA5Q6Q788 366 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 SPATA31A1Q5TZJ5 1347 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 MROH5Q6ZUA9 1318 aa16.01■□□□□ 0.15
SF1-202ENST00000334944 UQCRFS1P1P0C7P4 283 aa16■□□□□ 0.15
SF1-202ENST00000334944 TDO2P48775 406 aa16■□□□□ 0.15
SF1-202ENST00000334944 GTF2A1P52655 376 aaPredicted RBP16■□□□□ 0.15
SF1-202ENST00000334944 CHRNDQ07001 517 aa16■□□□□ 0.15
SF1-202ENST00000334944 MAP3K12Q12852 859 aa16■□□□□ 0.15
SF1-202ENST00000334944 ARHGAP29Q52LW3 1261 aa16■□□□□ 0.15
SF1-202ENST00000334944 SDR42E1Q8WUS8 393 aa16■□□□□ 0.15
SF1-202ENST00000334944 MYO1CO00159 1063 aa16■□□□□ 0.15
SF1-202ENST00000334944 SH2B2O14492 632 aaPredicted RBP16■□□□□ 0.15
SF1-202ENST00000334944 IGHMBP2P38935 993 aaKnown RBP16■□□□□ 0.15
SF1-202ENST00000334944 FAM160A1Q05DH4 1040 aa16■□□□□ 0.15
SF1-202ENST00000334944 MYSM1Q5VVJ2 828 aa16■□□□□ 0.15
SF1-202ENST00000334944 ADGRA1Q86SQ6 560 aa16■□□□□ 0.15
SF1-202ENST00000334944 LRRC8AQ8IWT6 810 aa16■□□□□ 0.15
SF1-202ENST00000334944 LINC00301Q8NCQ3 95 aa16■□□□□ 0.15
SF1-202ENST00000334944 CCDC34Q96HJ3 373 aa16■□□□□ 0.15
SF1-202ENST00000334944 JAG2Q9Y219 1238 aa16■□□□□ 0.15
SF1-202ENST00000334944 SLC4A4Q9Y6R1 1079 aa16■□□□□ 0.15
SF1-202ENST00000334944 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
SF1-202ENST00000334944 GNL2Q13823 731 aaKnown RBP16■□□□□ 0.15
SF1-202ENST00000334944 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
SF1-202ENST00000334944 SYNE3Q6ZMZ3 975 aa16■□□□□ 0.15
SF1-202ENST00000334944 PLA2G4DQ86XP0 818 aa16■□□□□ 0.15
SF1-202ENST00000334944 ENGASEQ8NFI3 743 aa16■□□□□ 0.15
SF1-202ENST00000334944 TSPYL1Q9H0U9 437 aa16■□□□□ 0.15
SF1-202ENST00000334944 MINDY4BA8MYZ0 360 aa15.99■□□□□ 0.15
SF1-202ENST00000334944 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
SF1-202ENST00000334944 ANKRD65E5RJM6 399 aa15.99■□□□□ 0.15
SF1-202ENST00000334944 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
SF1-202ENST00000334944 ERFEQ4G0M1 354 aa15.99■□□□□ 0.15
SF1-202ENST00000334944 CCDC152Q4G0S7 254 aa15.99■□□□□ 0.15
SF1-202ENST00000334944 EP400NLQ6ZTU2 488 aa15.99■□□□□ 0.15
SF1-202ENST00000334944 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
SF1-202ENST00000334944 SLC26A6Q9BXS9 759 aa15.99■□□□□ 0.15
SF1-202ENST00000334944 SPEF2Q9C093 1822 aa15.99■□□□□ 0.15
SF1-202ENST00000334944 GOLGA8AA7E2F4 631 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 SPTLC2O15270 562 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 ZBTB43O43298 467 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 RANBP6O60518 1105 aaKnown RBP15.98■□□□□ 0.15
SF1-202ENST00000334944 NTSR2O95665 410 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 NOP2P46087 812 aaKnown RBP15.98■□□□□ 0.15
SF1-202ENST00000334944 SLC4A8Q2Y0W8 1093 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 SLC51AQ86UW1 340 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 GPATCH11Q8N954 259 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 IGDCC4Q8TDY8 1250 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 MYH3P11055 1940 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 COL4A1P02462 1669 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 CYP2D7A0A087X1C5 515 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 CCDC69A6NI79 296 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 GOLGA6L19H0YKK7 550 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 GUCY1A2P33402 732 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 KRT40Q6A162 431 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 LY9Q9HBG7 655 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 RTEL1Q9NZ71 1219 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 DOT1LQ8TEK3 1739 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 BECN2A8MW95 431 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 SPECC1Q5M775 1068 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 VPS37DQ86XT2 251 aa15.98■□□□□ 0.15
SF1-202ENST00000334944 ZNF512BQ96KM6 892 aaPredicted RBP15.98■□□□□ 0.15
SF1-202ENST00000334944 ROBO1Q9Y6N7 1651 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 MYH7P12883 1935 aa15.97■□□□□ 0.15
SF1-202ENST00000334944 MYH14Q7Z406 1995 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms