RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
CSDC2-201ENST00000306149 CGNQ9P2M7 1197 aaKnown RBP17.47■□□□□ 0.39
CSDC2-201ENST00000306149 KCNJ14Q9UNX9 436 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 SLC12A7Q9Y666 1083 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 PATL2C9JE40 543 aaKnown RBP17.47■□□□□ 0.39
CSDC2-201ENST00000306149 UQCRFS1P1P0C7P4 283 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 FGFR2P21802 821 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 BCAMP50895 628 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 TRIM29Q14134 588 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 SUSD4Q5VX71 490 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 OSBPL5Q9H0X9 879 aaPredicted RBP17.47■□□□□ 0.39
CSDC2-201ENST00000306149 IMPACTQ9P2X3 320 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 A0A0U1RQG5 324 aaPredicted RBP17.46■□□□□ 0.39
CSDC2-201ENST00000306149 HSP90AA4PQ58FG1 418 aa17.46■□□□□ 0.39
CSDC2-201ENST00000306149 TMEM87BQ96K49 555 aa17.46■□□□□ 0.39
CSDC2-201ENST00000306149 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.46■□□□□ 0.39
CSDC2-201ENST00000306149 BTBD18B2RXH4 712 aa17.46■□□□□ 0.39
CSDC2-201ENST00000306149 FOXN1O15353 648 aa17.46■□□□□ 0.39
CSDC2-201ENST00000306149 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
CSDC2-201ENST00000306149 MPHOSPH8Q99549 860 aa17.46■□□□□ 0.39
CSDC2-201ENST00000306149 HSD3B7Q9H2F3 369 aa17.46■□□□□ 0.39
CSDC2-201ENST00000306149 ATRNO75882 1429 aa17.46■□□□□ 0.38
CSDC2-201ENST00000306149 GSG1L2A8MUP6 293 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 RGS22Q8NE09 1264 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 DPF2Q92785 391 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 ITGB4P16144 1822 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 SMIM22K7EJ46 135 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 ATP2B1P20020 1258 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 FANCCQ00597 558 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 MAP3K12Q12852 859 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
CSDC2-201ENST00000306149 ZNF215Q9UL58 517 aaPredicted RBP17.45■□□□□ 0.38
CSDC2-201ENST00000306149 HPSEQ9Y251 543 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 BCL9O00512 1426 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 SLC5A1P13866 664 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 GRIN1Q05586 938 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 SSRP1Q08945 709 aaKnown RBP17.45■□□□□ 0.38
CSDC2-201ENST00000306149 GOLGA8FQ08AF8 430 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 GOLGA8DPQ0D2H9 430 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 E4F1Q66K89 784 aaPredicted RBP17.45■□□□□ 0.38
CSDC2-201ENST00000306149 ZNF34Q8IZ26 560 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 OGFRQ9NZT2 677 aa17.45■□□□□ 0.38
CSDC2-201ENST00000306149 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.45■□□□□ 0.38
CSDC2-201ENST00000306149 MYH3P11055 1940 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 TDO2P48775 406 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 MFSD6Q6ZSS7 791 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 SGMS1Q86VZ5 419 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 PPP6R2O75170 966 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
CSDC2-201ENST00000306149 METTL16Q86W50 562 aaKnown RBP17.44■□□□□ 0.38
CSDC2-201ENST00000306149 NUP98P52948 1817 aa17.44■□□□□ 0.38
CSDC2-201ENST00000306149 WTIPA6NIX2 430 aaPredicted RBP17.43■□□□□ 0.38
CSDC2-201ENST00000306149 KIF2AO00139 706 aaPredicted RBP17.43■□□□□ 0.38
CSDC2-201ENST00000306149 NPHP1O15259 732 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 TPM4P67936 248 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 RESP18Q5W5W9 173 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 JMYQ8N9B5 988 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 EXOC5O00471 708 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 CNNM3Q8NE01 707 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 NUP133Q8WUM0 1156 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 TUBE1Q9UJT0 475 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 KCNH3Q9ULD8 1083 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 PCDHA5Q9Y5H7 936 aa17.43■□□□□ 0.38
CSDC2-201ENST00000306149 SLIT2O94813 1529 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 IL6STP40189 918 aaPredicted RBP17.42■□□□□ 0.38
CSDC2-201ENST00000306149 TOB1P50616 345 aaPredicted RBP17.42■□□□□ 0.38
CSDC2-201ENST00000306149 NR5A1Q13285 461 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 ALX1Q15699 326 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 CCDC150Q8NCX0 1101 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 CHD4Q14839 1912 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 SERPINC1P01008 464 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 LIFRP42702 1097 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
CSDC2-201ENST00000306149 NOSTRINQ8IVI9 506 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
CSDC2-201ENST00000306149 ACSBG1Q96GR2 724 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 TIGD1Q96MW7 591 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 ABCA3Q99758 1704 aa17.42■□□□□ 0.38
CSDC2-201ENST00000306149 ERVV-1B6SEH8 477 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 KCNJ6P48051 423 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 UBASH3AP57075 661 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 PDE4BQ07343 736 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 FANCLQ9NW38 375 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 TMEM232C9JQI7 657 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
CSDC2-201ENST00000306149 BMP6P22004 513 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 CFAP100Q494V2 611 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 KIF18AQ8NI77 898 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 SDR42E1Q8WUS8 393 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 PPP1R13BQ96KQ4 1090 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 LRP6O75581 1613 aa17.41■□□□□ 0.38
CSDC2-201ENST00000306149 MINDY4BA8MYZ0 360 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 WTAPQ15007 396 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 KRBA2Q6ZNG9 492 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 PDILTQ8N807 584 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms