RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 POLR3DP05423 398 aaPredicted RBP29.04■■■□□ 2.24
ROM1-201ENST00000278833 U2AF2P26368 475 aaKnown RBP eCLIP29.04■■■□□ 2.24
ROM1-201ENST00000278833 SUSD4Q5VX71 490 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 JMYQ8N9B5 988 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 KRT23Q9C075 422 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 KCND1Q9NSA2 647 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 LOC102724428A0A0B4J2F2 783 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 B4E1Z4 1266 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 SIK1P57059 783 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 SDF4Q9BRK5 362 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 HPSEQ9Y251 543 aa29.04■■■□□ 2.24
ROM1-201ENST00000278833 PPFIA3O75145 1194 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 CAMTA2O94983 1202 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 APPP05067 770 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 CCDC144BQ3MJ40 725 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 CCDC152Q4G0S7 254 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 KRT40Q6A162 431 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 VPS37DQ86XT2 251 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 CCDC144CPQ8IYA2 1237 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 CACTINQ8WUQ7 758 aaKnown RBP29.03■■■□□ 2.24
ROM1-201ENST00000278833 STAG1Q8WVM7 1258 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 FAM217BQ9NTX9 383 aaPredicted RBP29.03■■■□□ 2.24
ROM1-201ENST00000278833 FAM13BQ9NYF5 915 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 CCNL1Q9UK58 526 aaPredicted RBP29.03■■■□□ 2.24
ROM1-201ENST00000278833 DENND2AQ9ULE3 1009 aa29.03■■■□□ 2.24
ROM1-201ENST00000278833 CDC27P30260 824 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 DHX8Q14562 1220 aaKnown RBP29.02■■■□□ 2.24
ROM1-201ENST00000278833 NKX2-3Q8TAU0 364 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 NAPBQ9H115 298 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 ZNF202O95125 648 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 NLRP12P59046 1061 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 LRMPQ12912 555 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 PTPAQ15257 358 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 SLC27A3Q5K4L6 730 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 AKNAD1Q5T1N1 836 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 LRRC8AQ8IWT6 810 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.02■■■□□ 2.24
ROM1-201ENST00000278833 IMPACTQ9P2X3 320 aa29.02■■■□□ 2.24
ROM1-201ENST00000278833 GOLGA8AA7E2F4 631 aa29.01■■■□□ 2.23
ROM1-201ENST00000278833 MBD4O95243 580 aa29.01■■■□□ 2.23
ROM1-201ENST00000278833 RBM10P98175 930 aaKnown RBP29.01■■■□□ 2.23
ROM1-201ENST00000278833 ELOA2Q8IYF1 753 aaPredicted RBP29.01■■■□□ 2.23
ROM1-201ENST00000278833 WASF1Q92558 559 aa29.01■■■□□ 2.23
ROM1-201ENST00000278833 MPHOSPH8Q99549 860 aa29.01■■■□□ 2.23
ROM1-201ENST00000278833 MYH14Q7Z406 1995 aaKnown RBP29■■■□□ 2.23
ROM1-201ENST00000278833 GSG1L2A8MUP6 293 aa29■■■□□ 2.23
ROM1-201ENST00000278833 NTSR2O95665 410 aa29■■■□□ 2.23
ROM1-201ENST00000278833 PFKFB1P16118 471 aa29■■■□□ 2.23
ROM1-201ENST00000278833 TMEM67Q5HYA8 995 aa29■■■□□ 2.23
ROM1-201ENST00000278833 AOPEPQ8N6M6 819 aa29■■■□□ 2.23
ROM1-201ENST00000278833 MAGEB6Q8N7X4 407 aa29■■■□□ 2.23
ROM1-201ENST00000278833 MAP3K14Q99558 947 aa29■■■□□ 2.23
ROM1-201ENST00000278833 OSBPL5Q9H0X9 879 aaPredicted RBP29■■■□□ 2.23
ROM1-201ENST00000278833 SLC3A2P08195 630 aaKnown RBP29■■■□□ 2.23
ROM1-201ENST00000278833 IFNAR1P17181 557 aa29■■■□□ 2.23
ROM1-201ENST00000278833 IARSP41252 1262 aaKnown RBP29■■■□□ 2.23
ROM1-201ENST00000278833 GSDMDP57764 484 aa29■■■□□ 2.23
ROM1-201ENST00000278833 TUBE1Q9UJT0 475 aa29■■■□□ 2.23
ROM1-201ENST00000278833 MROH7-TTC4A0A0A0MT08 1334 aa28.99■■■□□ 2.23
ROM1-201ENST00000278833 CTIFO43310 598 aaKnown RBP28.99■■■□□ 2.23
ROM1-201ENST00000278833 RANBP6O60518 1105 aaKnown RBP28.99■■■□□ 2.23
ROM1-201ENST00000278833 FMNL1O95466 1100 aaPredicted RBP28.99■■■□□ 2.23
ROM1-201ENST00000278833 SCN7AQ01118 1682 aa28.99■■■□□ 2.23
ROM1-201ENST00000278833 CASZ1Q86V15 1759 aa28.98■■■□□ 2.23
ROM1-201ENST00000278833 RGL2O15211 777 aa28.98■■■□□ 2.23
ROM1-201ENST00000278833 ATP6V1AP38606 617 aa28.98■■■□□ 2.23
ROM1-201ENST00000278833 CRKLP46109 303 aaKnown RBP28.98■■■□□ 2.23
ROM1-201ENST00000278833 RAB11FIP4Q86YS3 637 aa28.98■■■□□ 2.23
ROM1-201ENST00000278833 NACAP1Q9BZK3 213 aa28.98■■■□□ 2.23
ROM1-201ENST00000278833 GJB4Q9NTQ9 266 aa28.98■■■□□ 2.23
ROM1-201ENST00000278833 IKBKBO14920 756 aa28.97■■■□□ 2.23
ROM1-201ENST00000278833 IGHMBP2P38935 993 aaKnown RBP28.97■■■□□ 2.23
ROM1-201ENST00000278833 ZNF804BA4D1E1 1349 aa28.97■■■□□ 2.23
ROM1-201ENST00000278833 WDHD1O75717 1129 aaPredicted RBP28.97■■■□□ 2.23
ROM1-201ENST00000278833 TRIM29Q14134 588 aa28.97■■■□□ 2.23
ROM1-201ENST00000278833 SYCP1Q15431 976 aa28.97■■■□□ 2.23
ROM1-201ENST00000278833 ZRSR1Q15695 479 aaKnown RBP28.97■■■□□ 2.23
ROM1-201ENST00000278833 MICU3Q86XE3 530 aa28.97■■■□□ 2.23
ROM1-201ENST00000278833 SENP2Q9HC62 589 aa28.97■■■□□ 2.23
ROM1-201ENST00000278833 ZSWIM5Q9P217 1185 aa28.97■■■□□ 2.23
ROM1-201ENST00000278833 MORC2Q9Y6X9 1032 aaPredicted RBP28.97■■■□□ 2.23
ROM1-201ENST00000278833 CUTAO60888 179 aa28.96■■■□□ 2.23
ROM1-201ENST00000278833 DPCR1Q3MIW9 517 aa28.96■■■□□ 2.23
ROM1-201ENST00000278833 HELBQ8NG08 1087 aaPredicted RBP28.96■■■□□ 2.23
ROM1-201ENST00000278833 AIFM3Q96NN9 605 aa28.96■■■□□ 2.23
ROM1-201ENST00000278833 CDC5LQ99459 802 aaKnown RBP28.96■■■□□ 2.23
ROM1-201ENST00000278833 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.96■■■□□ 2.23
ROM1-201ENST00000278833 SLC12A7Q9Y666 1083 aa28.96■■■□□ 2.23
ROM1-201ENST00000278833 DLEC1Q9Y238 1755 aa28.96■■■□□ 2.23
ROM1-201ENST00000278833 SMTNL1A8MU46 457 aa28.95■■■□□ 2.23
ROM1-201ENST00000278833 ITPK1Q13572 414 aa28.95■■■□□ 2.23
ROM1-201ENST00000278833 RESP18Q5W5W9 173 aa28.95■■■□□ 2.23
ROM1-201ENST00000278833 NFXL1Q6ZNB6 911 aa28.95■■■□□ 2.23
ROM1-201ENST00000278833 TMTC2Q8N394 836 aa28.95■■■□□ 2.23
ROM1-201ENST00000278833 RNF41Q9H4P4 317 aaPredicted RBP28.95■■■□□ 2.23
ROM1-201ENST00000278833 CCDC69A6NI79 296 aa28.95■■■□□ 2.22
ROM1-201ENST00000278833 IFIT3O14879 490 aaKnown RBP28.95■■■□□ 2.22
ROM1-201ENST00000278833 TPM4P67936 248 aa28.95■■■□□ 2.22
ROM1-201ENST00000278833 SSRP1Q08945 709 aaKnown RBP28.95■■■□□ 2.22
ROM1-201ENST00000278833 MFSD6Q6ZSS7 791 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms