RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 St5Q924W7 1134 aa15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 Trip6Q9Z1Y4 480 aa15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 Sh3tc1G3X9F6 1346 aa15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 A0A1Y7VML8 143 aa15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 Zhx1P70121 873 aa15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 Tacc1Q6Y685 774 aa15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 Ccdc172Q810N9 267 aa15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 Nop2Q922K7 793 aaKnown RBP15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 Krt24A1L317 512 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Oas2E9Q9A9 742 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Gjc1P28229 396 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Mtx1P47802 317 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 CebpaP53566 359 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Nyap1Q6PFX7 833 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Rbm15bQ6PHZ5 887 aaKnown RBP15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Ehd2Q8BH64 543 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Brms1Q99N20 246 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Q9D5Q8 446 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Adck5Q80V03 582 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Arpp21Q9DCB4 807 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Jdp2P97875 163 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 AmfrQ9R049 643 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Setdb1O88974 1307 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Ces3aQ63880 571 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 IqcgQ80W32 419 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Ces3bQ8VCU1 571 aa15.07■□□□□ 0
Pdgfra-205ENSMUST00000201711 Ppfibp2O35711 882 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Atp6v1aP50516 617 aaKnown RBP15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Oxr1Q4KMM3 866 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Spag5Q7TME2 1165 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Ctdp1Q7TSG2 960 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Otop3Q80UF9 577 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Arid5bQ8BM75 1188 aaKnown RBP15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Tubgcp2Q921G8 905 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Sept12Q9D451 317 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Palm3A2TJV2 734 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Diaph1O08808 1255 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 GabrdP22933 449 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Pde6aP27664 859 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Paxbp1P58501 919 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Lins1Q3U1D0 764 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Cep112Q5PR68 954 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Ccdc12Q8R344 166 aaKnown RBP15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Yeats4Q9CR11 227 aaKnown RBP15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Cd274Q9EP73 290 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Kansl3A2RSY1 903 aaKnown RBP15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Znf568E9PYI1 671 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 MthfslL7N466 203 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 PparaP23204 468 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 Themis2Q91YX0 663 aa15.06■□□□□ 0
Pdgfra-205ENSMUST00000201711 U2af2P26369 475 aaKnown RBP15.05■□□□□ 0
Pdgfra-205ENSMUST00000201711 Plcb3P51432 1234 aaKnown RBP15.05■□□□□ 0
Pdgfra-205ENSMUST00000201711 Map3k12Q60700 888 aa15.05■□□□□ 0
Pdgfra-205ENSMUST00000201711 Ift88Q61371 824 aa15.05■□□□□ 0
Pdgfra-205ENSMUST00000201711 Fez2Q6TYB5 348 aa15.05■□□□□ 0
Pdgfra-205ENSMUST00000201711 Kcnk13Q8R1P5 405 aa15.05■□□□□ 0
Pdgfra-205ENSMUST00000201711 Gja10Q9WUS4 505 aa15.05■□□□□ 0
Pdgfra-205ENSMUST00000201711 Spocd1B1ASB6 936 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 Stat5bP42232 786 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 VrtnQ3SYK4 740 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 Arid3aQ62431 601 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 Sept9Q80UG5 583 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 Frat2Q8K025 231 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 Atp10bB1AWN4 1474 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 HelbQ6NVF4 1074 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 Abcf1Q6P542 837 aaKnown RBP15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 Ccdc122Q8BVN0 290 aa15.05■□□□□ -0
Pdgfra-205ENSMUST00000201711 Cyp2d10P24456 504 aa15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 Slc27a1Q60714 646 aa15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 Asic1Q6NXK8 526 aa15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 Zswim4Q8C7B8 1101 aa15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 CenphQ9QYM8 241 aa15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 Gm5624F6ZZG8 207 aa15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 Maats1Q8BRC6 783 aa15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 Add3Q9QYB5 706 aaKnown RBP15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 Ube4aE9Q735 1028 aa15.04■□□□□ -0
Pdgfra-205ENSMUST00000201711 Ccdc85cE9Q6B2 420 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Islr2Q5RKR3 745 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Map10Q8BJS7 891 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Taok3Q8BYC6 898 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Phldb2Q8K1N2 1249 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Pafah1b1P63005 410 aaKnown RBP15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Cdan1Q8CC12 1239 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Pcdhb5Q91XZ5 792 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Slit3Q9WVB4 1523 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 PpardP35396 440 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Ssrp1Q08943 708 aaKnown RBP15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Mx2Q9WVP9 655 aa15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Kif20bQ80WE4 1774 aaKnown RBP15.03■□□□□ -0
Pdgfra-205ENSMUST00000201711 Pald1P70261 859 aa15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Znf697Q569E7 569 aa15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Gimap7Q8R379 293 aa15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Uba5Q8VE47 403 aa15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Gtf2iQ9ESZ8 998 aaKnown RBP15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Adarb2Q9JI20 745 aa15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Prr29B1ARI9 187 aa15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Copb2O55029 905 aa15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Commd10Q8JZY2 202 aa15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Rbm42Q91V81 474 aaKnown RBP15.02■□□□□ -0
Pdgfra-205ENSMUST00000201711 Mrvi1Q9WUX5 899 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms