RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 1700006A11RikB9EHI3 544 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Kif1cO35071 1100 aaKnown RBP8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Gspt2Q149F3 632 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Lrch2Q3UMG5 773 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Fam198bQ3UPI1 517 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Gpr139Q80UC8 345 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Rab3gap1Q80UJ7 981 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 GopcQ8BH60 463 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Cetn4Q8K4K1 168 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Hip1rQ9JKY5 1068 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Trim34bJ3QNR8 485 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Ube2hP62257 183 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Hnrnpul1Q8VDM6 859 aaKnown RBP8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Tekt2Q922G7 430 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Ranbp17Q99NF8 1088 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Trim34aQ99PP6 485 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Creld2Q9CYA0 350 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 AvenQ9D9K3 342 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Zfp213E9QAW0 468 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Diaph1O08808 1255 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Cdkl5Q3UTQ8 938 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Specc1Q5SXY1 1067 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Rbm26Q6NZN0 1012 aaKnown RBP8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Rec8Q8C5S7 591 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 4921504E06RikQ8CET2 560 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Chmp3Q9CQ10 224 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 PigoQ9JJI6 1093 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Morc1Q9WVL5 950 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Gm13023A2A8N2 498 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 GmnnO88513 206 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Jdp2P97875 163 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Serpinb1cQ5SV42 375 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Cdca8Q8BHX3 289 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Iffo1Q8BXL9 562 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 PreplQ8C167 725 aa8.09□□□□□ -1.11
Chm-202ENSMUST00000113388 Sos1Q62245 1319 aa8.09□□□□□ -1.12
Chm-202ENSMUST00000113388 Ttll3A4Q9E5 927 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Cnnm3Q32NY4 713 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Uspl1Q3ULM6 1089 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Drc1Q3USS3 753 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Ppfia2Q8BSS9 1257 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 CgasQ8C6L5 507 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Rhot2Q8JZN7 620 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Nip7Q9CXK8 180 aaKnown RBP8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 PalmdQ9JHU2 551 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Kif23E9Q5G3 953 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Map4k4P97820 1233 aaKnown RBP8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 PapolaQ61183 739 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Zswim4Q8C7B8 1101 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Inpp5bQ8K337 993 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Akt1s1Q9D1F4 257 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Trim17Q7TPM3 477 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Trim29Q8R2Q0 587 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Bzw2Q91VK1 419 aaKnown RBP8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Ssfa2Q922B9 1252 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Rsph3bQ9DA80 389 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 TefQ9JLC6 301 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Ecel1Q9JMI0 775 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Coro1cQ9WUM4 474 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 AceP09470 1312 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 OatP29758 439 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Tlr8P58682 1032 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Pfkfb2P70265 519 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Ezh1P70351 747 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Ccdc84Q4VA36 332 aaKnown RBP8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Ppp1r14bQ62084 147 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Eif4g2Q62448 906 aaKnown RBP8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Ccdc158Q8CDI6 1109 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 TraipQ8VIG6 470 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Smarca5Q91ZW3 1051 aaKnown RBP8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Atp6v1g1Q9CR51 118 aa8.08□□□□□ -1.12
Chm-202ENSMUST00000113388 Gm9992B2RWK3 458 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 FosbP13346 338 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Ag2Q3UPL5 249 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 MmeQ61391 750 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Dnajc8Q6NZB0 253 aaKnown RBP8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Unc93aQ710D3 458 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Fam210aQ8BGY7 273 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Crb1Q8VHS2 1405 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Znf622Q91VY9 476 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Cdc37l1Q9CZP7 335 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 NagaQ9QWR8 415 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Samsn1P57725 372 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Eif5P59325 429 aaKnown RBP8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Adam1aQ60813 791 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Agtpbp1Q641K1 1218 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Kiaa1328Q6NZK5 612 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Oxsr1Q6P9R2 527 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Ube2q1Q7TSS2 422 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Fbxo38Q8BMI0 1194 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Phldb2Q8K1N2 1249 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Paip2bQ91W45 136 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 IydQ9DCX8 285 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Nsd3Q6P2L6 1439 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Exoc6bA6H5Z3 810 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Cdr1E9Q0B4 517 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Erich2E9Q1A6 463 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Gpatch3Q8BIY1 525 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Apol7cQ8C6E1 369 aa8.07□□□□□ -1.12
Chm-202ENSMUST00000113388 Ppfibp1Q8C8U0 969 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms