RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C TY2B-DR1Q12472 1770 aa4.43□□□□□ -1.7
RPA135YPR010C TY2B-OR2Q12501 1770 aa4.43□□□□□ -1.7
RPA135YPR010C ITT1Q04638 464 aa4.43□□□□□ -1.7
RPA135YPR010C ESC1Q03661 1658 aaKnown RBP4.43□□□□□ -1.7
RPA135YPR010C NSR1P27476 414 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RPA135YPR010C PSD2P53037 1138 aaKnown RBP4.42□□□□□ -1.7
RPA135YPR010C BUD3P25558 1636 aa4.42□□□□□ -1.7
RPA135YPR010C BNR1P40450 1375 aa4.42□□□□□ -1.7
RPA135YPR010C SRB8P25648 1427 aa4.42□□□□□ -1.7
RPA135YPR010C GEA2P39993 1459 aaKnown RBP4.41□□□□□ -1.7
RPA135YPR010C GDB1Q06625 1536 aa4.41□□□□□ -1.7
RPA135YPR010C TYS1P36421 394 aaKnown RBP4.4□□□□□ -1.71
RPA135YPR010C IQG1Q12280 1495 aa4.4□□□□□ -1.71
RPA135YPR010C TY1B-DR3Q99231 1755 aa4.4□□□□□ -1.71
RPA135YPR010C MRX12P47084 519 aa4.39□□□□□ -1.71
RPA135YPR010C TY2B-BQ12491 1770 aa4.39□□□□□ -1.71
RPA135YPR010C DRS2P39524 1355 aa4.39□□□□□ -1.71
RPA135YPR010C TAF8Q03750 510 aa4.38□□□□□ -1.71
RPA135YPR010C CAB1Q04430 367 aa4.38□□□□□ -1.71
RPA135YPR010C PDS5Q04264 1277 aa4.38□□□□□ -1.71
RPA135YPR010C CHZ1P40019 153 aaPredicted RBP4.37□□□□□ -1.71
RPA135YPR010C SNT2P53127 1403 aa4.37□□□□□ -1.71
RPA135YPR010C SPE2P21182 396 aa4.36□□□□□ -1.71
RPA135YPR010C PAP2P53632 584 aaKnown RBP4.36□□□□□ -1.71
RPA135YPR010C RIA1P53893 1110 aa4.35□□□□□ -1.71
RPA135YPR010C ULS1Q08562 1619 aa4.35□□□□□ -1.71
RPA135YPR010C CAT8P39113 1433 aa4.35□□□□□ -1.71
RPA135YPR010C ESL2P36168 1195 aa4.35□□□□□ -1.71
RPA135YPR010C NOP2P40991 618 aaKnown RBP4.34□□□□□ -1.71
RPA135YPR010C TY1B-BRQ12193 1756 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-GR3Q12316 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-ORQ92393 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-HO13535 1793 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-DR5P0C2I2 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-DR6P0C2I3 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-LR2P0C2I5 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-LR3P0C2I6 1755 aaKnown RBP4.34□□□□□ -1.71
RPA135YPR010C TY1B-PR1P0C2I9 1755 aaKnown RBP4.34□□□□□ -1.71
RPA135YPR010C TY1B-PR2P0C2J0 1756 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-PR3P0C2J1 1755 aaKnown RBP4.34□□□□□ -1.71
RPA135YPR010C TY1B-JR1P47098 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-ML2Q03434 1755 aaKnown RBP4.34□□□□□ -1.71
RPA135YPR010C TY1B-ER1Q03612 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-ML1Q04711 1755 aaKnown RBP4.34□□□□□ -1.71
RPA135YPR010C TY1B-GR2Q12269 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-OLQ12273 1755 aa4.34□□□□□ -1.71
RPA135YPR010C TY1B-PLQ12414 1755 aaKnown RBP4.34□□□□□ -1.71
RPA135YPR010C ENP1P38333 483 aaKnown RBP4.34□□□□□ -1.72
RPA135YPR010C PTP3P40048 928 aa4.33□□□□□ -1.72
RPA135YPR010C PDR10P51533 1564 aa4.33□□□□□ -1.72
RPA135YPR010C ARO1P08566 1588 aaKnown RBP4.33□□□□□ -1.72
RPA135YPR010C RTG3P38165 486 aa4.33□□□□□ -1.72
RPA135YPR010C IPL1P38991 367 aa4.33□□□□□ -1.72
RPA135YPR010C YAP3P38749 330 aa4.32□□□□□ -1.72
RPA135YPR010C NST1P53935 1240 aa4.32□□□□□ -1.72
RPA135YPR010C MET5P47169 1442 aa4.32□□□□□ -1.72
RPA135YPR010C YSP2Q06681 1438 aa4.32□□□□□ -1.72
RPA135YPR010C RCM1P53972 490 aa4.32□□□□□ -1.72
RPA135YPR010C TY3B-GQ99315 1547 aa4.31□□□□□ -1.72
RPA135YPR010C MMS1Q06211 1407 aa4.31□□□□□ -1.72
RPA135YPR010C LTE1P07866 1435 aa4.31□□□□□ -1.72
RPA135YPR010C PDR5P33302 1511 aaKnown RBP4.3□□□□□ -1.72
RPA135YPR010C RLF2Q12495 606 aa4.3□□□□□ -1.72
RPA135YPR010C RPA190P10964 1664 aaKnown RBP4.3□□□□□ -1.72
RPA135YPR010C KRE5P22023 1365 aa4.3□□□□□ -1.72
RPA135YPR010C SEC3P33332 1336 aaKnown RBP4.29□□□□□ -1.72
RPA135YPR010C TY1B-JR2P47100 1755 aaKnown RBP4.29□□□□□ -1.72
RPA135YPR010C TY1B-ER2Q03619 1755 aa4.29□□□□□ -1.72
RPA135YPR010C TY1B-MR1Q04214 1755 aa4.29□□□□□ -1.72
RPA135YPR010C TY1B-MR2Q04670 1755 aaKnown RBP4.29□□□□□ -1.72
RPA135YPR010C TY1B-LR1Q12088 1755 aaKnown RBP4.29□□□□□ -1.72
RPA135YPR010C TY1B-NL1Q12112 1755 aa4.29□□□□□ -1.72
RPA135YPR010C TY1B-GR1Q12141 1755 aa4.29□□□□□ -1.72
RPA135YPR010C TY1B-BLQ12490 1755 aa4.29□□□□□ -1.72
RPA135YPR010C NTE1Q04958 1679 aa4.29□□□□□ -1.72
RPA135YPR010C GAS4Q08271 471 aa4.29□□□□□ -1.72
RPA135YPR010C RAD9P14737 1309 aa4.29□□□□□ -1.72
RPA135YPR010C ATG36P46983 293 aa4.29□□□□□ -1.72
RPA135YPR010C FAP1P53971 965 aa4.28□□□□□ -1.72
RPA135YPR010C KAR2P16474 682 aaKnown RBP4.28□□□□□ -1.72
RPA135YPR010C YBR287WP38355 427 aa4.28□□□□□ -1.72
RPA135YPR010C ALD4P46367 519 aaKnown RBP4.28□□□□□ -1.72
RPA135YPR010C SPO14P36126 1683 aa4.27□□□□□ -1.73
RPA135YPR010C FPR3P38911 411 aaKnown RBP4.27□□□□□ -1.73
RPA135YPR010C NOP8Q08287 484 aaPredicted RBP4.27□□□□□ -1.73
RPA135YPR010C NUP170P38181 1502 aa4.27□□□□□ -1.73
RPA135YPR010C CSE4P36012 229 aa4.26□□□□□ -1.73
RPA135YPR010C YDL144CQ07589 356 aa4.26□□□□□ -1.73
RPA135YPR010C MPP10P47083 593 aaKnown RBP4.26□□□□□ -1.73
RPA135YPR010C RPO21P04050 1733 aaKnown RBP4.26□□□□□ -1.73
RPA135YPR010C RTR1P40084 226 aaPredicted RBP4.25□□□□□ -1.73
RPA135YPR010C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
RPA135YPR010C MHP1P43638 1398 aa4.25□□□□□ -1.73
RPA135YPR010C RTC1Q08281 1341 aa4.24□□□□□ -1.73
RPA135YPR010C RPS24AP0CX31 135 aaKnown RBP4.24□□□□□ -1.73
RPA135YPR010C RPS24BP0CX32 135 aaKnown RBP4.24□□□□□ -1.73
RPA135YPR010C YBT1P32386 1661 aa4.23□□□□□ -1.73
RPA135YPR010C DPS1P04802 557 aaKnown RBP4.23□□□□□ -1.73
RPA135YPR010C TRK1P12685 1235 aa4.23□□□□□ -1.73
RPA135YPR010C SCT1P32784 759 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 76.9 ms