RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W COX6P00427 148 aa9.22□□□□□ -0.93
CIT3YPR001W ATG32P40458 529 aa9.21□□□□□ -0.93
CIT3YPR001W RPL34AP87262 121 aaPredicted RBP9.21□□□□□ -0.94
CIT3YPR001W RRN6P32786 894 aa9.2□□□□□ -0.94
CIT3YPR001W HEM3P28789 327 aa9.18□□□□□ -0.94
CIT3YPR001W CDC3P32457 520 aaKnown RBP9.18□□□□□ -0.94
CIT3YPR001W BCH2P36122 765 aa9.17□□□□□ -0.94
CIT3YPR001W RPL34BP40525 121 aaKnown RBP9.17□□□□□ -0.94
CIT3YPR001W SSF1P38789 453 aaPredicted RBP9.16□□□□□ -0.94
CIT3YPR001W YTA7P40340 1379 aa9.16□□□□□ -0.94
CIT3YPR001W CSN12P47130 423 aa9.15□□□□□ -0.95
CIT3YPR001W CPS1P27614 576 aa9.14□□□□□ -0.95
CIT3YPR001W SEN54Q02825 467 aaPredicted RBP9.14□□□□□ -0.95
CIT3YPR001W BRN1P38170 754 aa9.13□□□□□ -0.95
CIT3YPR001W TIF1P10081 395 aaKnown RBP9.12□□□□□ -0.95
CIT3YPR001W YCK3P39962 524 aa9.12□□□□□ -0.95
CIT3YPR001W EPS1P40557 701 aa9.12□□□□□ -0.95
CIT3YPR001W ERG12P07277 443 aa9.1□□□□□ -0.95
CIT3YPR001W TTI1P36097 1038 aa9.09□□□□□ -0.95
CIT3YPR001W URN1Q06525 465 aaKnown RBP9.09□□□□□ -0.95
CIT3YPR001W NOB1Q08444 459 aaKnown RBP9.08□□□□□ -0.96
CIT3YPR001W MRPL32P25348 183 aa9.07□□□□□ -0.96
CIT3YPR001W MIF2P35201 549 aa9.07□□□□□ -0.96
CIT3YPR001W UBP14P38237 781 aaKnown RBP9.06□□□□□ -0.96
CIT3YPR001W VPS29P38759 282 aa9.06□□□□□ -0.96
CIT3YPR001W DOS2P54858 310 aa9.06□□□□□ -0.96
CIT3YPR001W YPR204WQ08995 1032 aa9.06□□□□□ -0.96
CIT3YPR001W EDS1P38073 919 aa9.05□□□□□ -0.96
CIT3YPR001W CDC27P38042 758 aa9.04□□□□□ -0.96
CIT3YPR001W HAT1Q12341 374 aa9.03□□□□□ -0.96
CIT3YPR001W ASF1P32447 279 aa9.02□□□□□ -0.96
CIT3YPR001W SPC42P36094 363 aa9.02□□□□□ -0.96
CIT3YPR001W OCA5P38738 679 aa9.02□□□□□ -0.96
CIT3YPR001W ITT1Q04638 464 aa9.02□□□□□ -0.96
CIT3YPR001W BDF1P35817 686 aa9.02□□□□□ -0.97
CIT3YPR001W YBL036CP38197 257 aa9.02□□□□□ -0.97
CIT3YPR001W RTG2P32608 588 aaKnown RBP9.01□□□□□ -0.97
CIT3YPR001W FAR11P53917 953 aa9□□□□□ -0.97
CIT3YPR001W PSE1P32337 1089 aaKnown RBP8.98□□□□□ -0.97
CIT3YPR001W BIO2P32451 375 aa8.98□□□□□ -0.97
CIT3YPR001W YRB30P53107 440 aaPredicted RBP8.97□□□□□ -0.97
CIT3YPR001W KTR1P27810 393 aaKnown RBP8.96□□□□□ -0.97
CIT3YPR001W YDR090CQ03193 310 aa8.96□□□□□ -0.97
CIT3YPR001W FPR4Q06205 392 aaPredicted RBP8.96□□□□□ -0.97
CIT3YPR001W STM1P39015 273 aaKnown RBP8.95□□□□□ -0.98
CIT3YPR001W YML083CQ04526 418 aa8.95□□□□□ -0.98
CIT3YPR001W PUP1P25043 261 aa8.94□□□□□ -0.98
CIT3YPR001W VHR2P40041 505 aa8.94□□□□□ -0.98
CIT3YPR001W PTC3P34221 468 aaKnown RBP8.92□□□□□ -0.98
CIT3YPR001W IPL1P38991 367 aa8.92□□□□□ -0.98
CIT3YPR001W NUG1P40010 520 aaKnown RBP8.92□□□□□ -0.98
CIT3YPR001W SEC20P28791 383 aa8.91□□□□□ -0.98
CIT3YPR001W YMR1P47147 688 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
CIT3YPR001W YNL108CP53929 270 aa8.91□□□□□ -0.98
CIT3YPR001W SIS2P36024 562 aa8.9□□□□□ -0.98
CIT3YPR001W YAF9P53930 226 aa8.9□□□□□ -0.98
CIT3YPR001W STS1P38637 319 aa8.89□□□□□ -0.99
CIT3YPR001W KIC1P38692 1080 aa8.89□□□□□ -0.99
CIT3YPR001W NNF1P47149 201 aa8.89□□□□□ -0.99
CIT3YPR001W TYW1Q08960 810 aaKnown RBP8.89□□□□□ -0.99
CIT3YPR001W CSE4P36012 229 aa8.89□□□□□ -0.99
CIT3YPR001W NMD2P38798 1089 aaKnown RBP8.89□□□□□ -0.99
CIT3YPR001W ALD4P46367 519 aaKnown RBP8.89□□□□□ -0.99
CIT3YPR001W ATG36P46983 293 aa8.89□□□□□ -0.99
CIT3YPR001W ALD2P47771 506 aa8.89□□□□□ -0.99
CIT3YPR001W TEA1P47988 759 aa8.89□□□□□ -0.99
CIT3YPR001W RTS3P53289 263 aa8.88□□□□□ -0.99
CIT3YPR001W LAM6Q08001 693 aa8.88□□□□□ -0.99
CIT3YPR001W KEX1P09620 729 aa8.86□□□□□ -0.99
CIT3YPR001W SVF1Q05515 481 aa8.85□□□□□ -0.99
CIT3YPR001W YLR326WQ06170 240 aaKnown RBP8.85□□□□□ -0.99
CIT3YPR001W SUP45P12385 437 aaKnown RBP8.84□□□□□ -0.99
CIT3YPR001W CST6P40535 587 aa8.83□□□□□ -1
CIT3YPR001W HAA1Q12753 694 aaKnown RBP8.83□□□□□ -1
CIT3YPR001W YBL113CQ7M4S9 792 aa8.83□□□□□ -1
CIT3YPR001W SUB1P54000 292 aaKnown RBP8.83□□□□□ -1
CIT3YPR001W ENO1P00924 437 aaKnown RBP8.82□□□□□ -1
CIT3YPR001W DBP1P24784 617 aaKnown RBP8.82□□□□□ -1
CIT3YPR001W YJR008WP47085 338 aa8.82□□□□□ -1
CIT3YPR001W RRP15Q06511 250 aaPredicted RBP8.82□□□□□ -1
CIT3YPR001W MSC6Q08818 692 aaKnown RBP8.82□□□□□ -1
CIT3YPR001W RAD59Q12223 238 aa8.82□□□□□ -1
CIT3YPR001W TGL4P36165 910 aa8.81□□□□□ -1
CIT3YPR001W YFR006WP43590 535 aa8.81□□□□□ -1
CIT3YPR001W SWE1P32944 819 aa8.8□□□□□ -1
CIT3YPR001W MRX10Q05648 414 aa8.79□□□□□ -1
CIT3YPR001W RAD54P32863 898 aa8.78□□□□□ -1
CIT3YPR001W ERP5P38819 212 aa8.78□□□□□ -1
CIT3YPR001W PKH3Q03306 898 aaPredicted RBP8.78□□□□□ -1
CIT3YPR001W ENO2P00925 437 aaKnown RBP8.77□□□□□ -1
CIT3YPR001W POL32P47110 350 aa8.77□□□□□ -1
CIT3YPR001W ATE1P16639 503 aa8.76□□□□□ -1.01
CIT3YPR001W SPT5P27692 1063 aaKnown RBP8.76□□□□□ -1.01
CIT3YPR001W CLB5P30283 435 aa8.76□□□□□ -1.01
CIT3YPR001W RNH70P53331 553 aa8.76□□□□□ -1.01
CIT3YPR001W HST2P53686 357 aa8.76□□□□□ -1.01
CIT3YPR001W VPS72Q03388 795 aa8.76□□□□□ -1.01
CIT3YPR001W ORC6P38826 435 aa8.75□□□□□ -1.01
CIT3YPR001W PCS60P38137 543 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
CIT3YPR001W RIM21P48565 533 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms