RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C HTA1P04911 132 aaKnown RBP4.63□□□□□ -1.67
SIR3YLR442C HTA2P04912 132 aa4.63□□□□□ -1.67
SIR3YLR442C PTC4P38089 393 aa4.62□□□□□ -1.67
SIR3YLR442C YEL023CP39992 682 aa4.6□□□□□ -1.67
SIR3YLR442C DCW1P36091 449 aa4.59□□□□□ -1.68
SIR3YLR442C XDJ1P39102 459 aa4.55□□□□□ -1.68
SIR3YLR442C YDR344CQ05510 147 aa4.53□□□□□ -1.68
SIR3YLR442C VRP1P37370 817 aa4.52□□□□□ -1.69
SIR3YLR442C GRE2Q12068 342 aaKnown RBP4.52□□□□□ -1.69
SIR3YLR442C PML39Q03760 334 aa4.51□□□□□ -1.69
SIR3YLR442C NST1P53935 1240 aa4.49□□□□□ -1.69
SIR3YLR442C ARH1P48360 493 aa4.49□□□□□ -1.69
SIR3YLR442C GUT1P32190 709 aa4.48□□□□□ -1.69
SIR3YLR442C ELP4Q02884 456 aaKnown RBP4.48□□□□□ -1.69
SIR3YLR442C MAK11P20484 414 aaKnown RBP4.47□□□□□ -1.69
SIR3YLR442C PTC3P34221 468 aaKnown RBP4.46□□□□□ -1.7
SIR3YLR442C EDS1P38073 919 aa4.45□□□□□ -1.7
SIR3YLR442C ATH1P48016 1211 aa4.45□□□□□ -1.7
SIR3YLR442C DPS1P04802 557 aaKnown RBP4.45□□□□□ -1.7
SIR3YLR442C MIF2P35201 549 aa4.43□□□□□ -1.7
SIR3YLR442C RAM2P29703 316 aa4.43□□□□□ -1.7
SIR3YLR442C SOL3P38858 249 aa4.43□□□□□ -1.7
SIR3YLR442C MID1P41821 548 aa4.43□□□□□ -1.7
SIR3YLR442C AI4P03878 556 aa4.42□□□□□ -1.7
SIR3YLR442C SPT23P35210 1082 aa4.42□□□□□ -1.7
SIR3YLR442C MPH3P0CE00 602 aa4.42□□□□□ -1.7
SIR3YLR442C COQ8P27697 501 aa4.39□□□□□ -1.71
SIR3YLR442C SRC1Q03707 834 aa4.39□□□□□ -1.71
SIR3YLR442C BNI4P53858 892 aa4.39□□□□□ -1.71
SIR3YLR442C HAP5Q02516 242 aa4.39□□□□□ -1.71
SIR3YLR442C ILV3P39522 585 aaKnown RBP4.38□□□□□ -1.71
SIR3YLR442C YML082WQ04533 649 aaKnown RBP4.38□□□□□ -1.71
SIR3YLR442C PEX29Q03370 554 aa4.37□□□□□ -1.71
SIR3YLR442C RGA2Q06407 1009 aa4.37□□□□□ -1.71
SIR3YLR442C NOP53Q12080 455 aaKnown RBP4.36□□□□□ -1.71
SIR3YLR442C YGR273CP53329 174 aa4.34□□□□□ -1.72
SIR3YLR442C MPC54Q08550 464 aa4.34□□□□□ -1.72
SIR3YLR442C PTC2P39966 464 aaKnown RBP4.33□□□□□ -1.72
SIR3YLR442C RGA1P39083 1007 aa4.31□□□□□ -1.72
SIR3YLR442C NMA111P53920 997 aa4.29□□□□□ -1.72
SIR3YLR442C SLI15P38283 698 aa4.29□□□□□ -1.72
SIR3YLR442C DPL1Q05567 589 aa4.28□□□□□ -1.72
SIR3YLR442C RAM1P22007 431 aa4.27□□□□□ -1.73
SIR3YLR442C YPR015CQ12531 247 aa4.27□□□□□ -1.73
SIR3YLR442C RAS1P01119 309 aa4.25□□□□□ -1.73
SIR3YLR442C ISU2Q12056 156 aa4.23□□□□□ -1.73
SIR3YLR442C KEX1P09620 729 aa4.22□□□□□ -1.73
SIR3YLR442C RQC2Q12532 1038 aaKnown RBP4.22□□□□□ -1.73
SIR3YLR442C AMS1P22855 1083 aa4.21□□□□□ -1.74
SIR3YLR442C SDH2P21801 266 aa4.19□□□□□ -1.74
SIR3YLR442C TRK1P12685 1235 aa4.18□□□□□ -1.74
SIR3YLR442C SAS4Q04003 481 aa4.18□□□□□ -1.74
SIR3YLR442C GYP1Q08484 637 aa4.18□□□□□ -1.74
SIR3YLR442C CDC73Q06697 393 aa4.18□□□□□ -1.74
SIR3YLR442C YLR326WQ06170 240 aaKnown RBP4.16□□□□□ -1.74
SIR3YLR442C UBP14P38237 781 aaKnown RBP4.15□□□□□ -1.74
SIR3YLR442C PDR1P12383 1068 aa4.15□□□□□ -1.75
SIR3YLR442C PCS60P38137 543 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
SIR3YLR442C YEL077CQ3E7X8 1277 aa4.11□□□□□ -1.75
SIR3YLR442C VHR2P40041 505 aa4.11□□□□□ -1.75
SIR3YLR442C MRF1P30775 413 aaPredicted RBP4.1□□□□□ -1.75
SIR3YLR442C SET1P38827 1080 aaKnown RBP4.1□□□□□ -1.75
SIR3YLR442C RPP1BP10622 106 aaKnown RBP4.1□□□□□ -1.75
SIR3YLR442C RAD54P32863 898 aa4.09□□□□□ -1.75
SIR3YLR442C YPL062WQ02781 134 aa4.09□□□□□ -1.75
SIR3YLR442C BUD20Q08004 166 aaPredicted RBP4.08□□□□□ -1.76
SIR3YLR442C GAP1P19145 602 aaPredicted RBP4.08□□□□□ -1.76
SIR3YLR442C PRT1P06103 763 aaKnown RBP4.07□□□□□ -1.76
SIR3YLR442C YDR090CQ03193 310 aa4.07□□□□□ -1.76
SIR3YLR442C TAF7Q05021 590 aa4.06□□□□□ -1.76
SIR3YLR442C STR2P47164 639 aa4.05□□□□□ -1.76
SIR3YLR442C YRR1Q12172 810 aa4.04□□□□□ -1.76
SIR3YLR442C TFB4Q12004 338 aa4.04□□□□□ -1.76
SIR3YLR442C BRE2P43132 505 aa4.03□□□□□ -1.76
SIR3YLR442C ISM1P48526 1002 aa4.03□□□□□ -1.76
SIR3YLR442C CSC1Q06538 782 aa4.03□□□□□ -1.76
SIR3YLR442C ERG12P07277 443 aa4.02□□□□□ -1.77
SIR3YLR442C AIR1P40507 360 aaKnown RBP4.01□□□□□ -1.77
SIR3YLR442C CST6P40535 587 aa4.01□□□□□ -1.77
SIR3YLR442C PEX21P50091 288 aa4.01□□□□□ -1.77
SIR3YLR442C NUD1P32336 851 aa4.01□□□□□ -1.77
SIR3YLR442C IFH1P39520 1085 aa4.01□□□□□ -1.77
SIR3YLR442C LAM6Q08001 693 aa4.01□□□□□ -1.77
SIR3YLR442C KIC1P38692 1080 aa4□□□□□ -1.77
SIR3YLR442C GCR2Q01722 534 aa4□□□□□ -1.77
SIR3YLR442C TY1A-DR4O74302 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-HP0C2I4 478 aaKnown RBP3.99□□□□□ -1.77
SIR3YLR442C TY1A-AP0CX57 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-PR1P0CX58 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-ORP0CX59 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-PR2P0CX60 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-DR5P0CX65 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-ER2P0CX66 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-GR3P0CX67 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-LR1P0CX68 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-MR2P0CX69 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-JR2P47099 440 aa3.99□□□□□ -1.77
SIR3YLR442C CLA4P48562 842 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-DR1Q03856 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-ML1Q04706 440 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms