RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	TFB3	Q03290	321 aa		2.63	□□□□□ -1.99
YCS4	YLR272C	BDF1	P35817	686 aa		2.63	□□□□□ -1.99
YCS4	YLR272C	PEX21	P50091	288 aa		2.63	□□□□□ -1.99
YCS4	YLR272C	ARG8	P18544	423 aa		2.62	□□□□□ -1.99
YCS4	YLR272C	CPS1	P27614	576 aa		2.62	□□□□□ -1.99
YCS4	YLR272C	GUA1	P38625	525 aa	Known RBP	2.62	□□□□□ -1.99
YCS4	YLR272C	REF2	P42073	533 aa	Predicted RBP	2.62	□□□□□ -1.99
YCS4	YLR272C	SET4	P42948	560 aa		2.62	□□□□□ -1.99
YCS4	YLR272C	YOR238W	Q08634	303 aa		2.62	□□□□□ -1.99
YCS4	YLR272C	PKC1	P24583	1151 aa		2.61	□□□□□ -1.99
YCS4	YLR272C	PKH3	Q03306	898 aa	Predicted RBP	2.6	□□□□□ -1.99
YCS4	YLR272C	ERG12	P07277	443 aa		2.6	□□□□□ -1.99
YCS4	YLR272C	CSN12	P47130	423 aa		2.6	□□□□□ -1.99
YCS4	YLR272C	RAD54	P32863	898 aa		2.6	□□□□□ -1.99
YCS4	YLR272C	PSD2	P53037	1138 aa	Known RBP	2.6	□□□□□ -1.99
YCS4	YLR272C	YNL108C	P53929	270 aa		2.6	□□□□□ -1.99
YCS4	YLR272C	SPP1	Q03012	353 aa		2.59	□□□□□ -1.99
YCS4	YLR272C	NOP7	P53261	605 aa	Known RBP	2.58	□□□□□ -2
YCS4	YLR272C	BIM1	P40013	344 aa		2.58	□□□□□ -2
YCS4	YLR272C	YML020W	Q03722	664 aa		2.58	□□□□□ -2
YCS4	YLR272C	SCJ1	P25303	377 aa		2.56	□□□□□ -2
YCS4	YLR272C	RTG2	P32608	588 aa	Known RBP	2.56	□□□□□ -2
YCS4	YLR272C	MET10	P39692	1035 aa		2.56	□□□□□ -2
YCS4	YLR272C	GRE2	Q12068	342 aa	Known RBP	2.56	□□□□□ -2
YCS4	YLR272C	ESS1	P22696	170 aa		2.56	□□□□□ -2
YCS4	YLR272C	TBF1	Q02457	562 aa		2.56	□□□□□ -2
YCS4	YLR272C	SLX8	P40072	274 aa		2.56	□□□□□ -2
YCS4	YLR272C	ELP4	Q02884	456 aa	Known RBP	2.56	□□□□□ -2
YCS4	YLR272C	ATG32	P40458	529 aa		2.55	□□□□□ -2
YCS4	YLR272C	ENV9	Q08651	330 aa		2.55	□□□□□ -2
YCS4	YLR272C	HAT1	Q12341	374 aa		2.55	□□□□□ -2
YCS4	YLR272C	EDS1	P38073	919 aa		2.54	□□□□□ -2
YCS4	YLR272C	YNR021W	P53723	404 aa	Known RBP	2.54	□□□□□ -2
YCS4	YLR272C	SAS10	Q12136	610 aa	Predicted RBP	2.54	□□□□□ -2
YCS4	YLR272C	MAK11	P20484	414 aa	Known RBP	2.54	□□□□□ -2
YCS4	YLR272C	GYP5	Q12344	894 aa		2.54	□□□□□ -2
YCS4	YLR272C	SSA4	P22202	642 aa	Known RBP	2.54	□□□□□ -2
YCS4	YLR272C	SLD2	P34252	453 aa		2.54	□□□□□ -2
YCS4	YLR272C	STS1	P38637	319 aa		2.54	□□□□□ -2
YCS4	YLR272C	SSA1	P10591	642 aa	Known RBP	2.53	□□□□□ -2
YCS4	YLR272C	TEA1	P47988	759 aa		2.53	□□□□□ -2
YCS4	YLR272C	AIM44	Q99299	758 aa		2.53	□□□□□ -2
YCS4	YLR272C	PTC3	P34221	468 aa	Known RBP	2.53	□□□□□ -2
YCS4	YLR272C	UBP14	P38237	781 aa	Known RBP	2.53	□□□□□ -2
YCS4	YLR272C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	2.53	□□□□□ -2	not detected
YCS4	YLR272C	JIP5	Q06214	492 aa	Predicted RBP	2.53	□□□□□ -2
YCS4	YLR272C	PEP7	P32609	515 aa		2.52	□□□□□ -2.01
YCS4	YLR272C	SSA2	P10592	639 aa	Known RBP	2.51	□□□□□ -2.01
YCS4	YLR272C	ABP1	P15891	592 aa	Known RBP	2.51	□□□□□ -2.01
YCS4	YLR272C	SLY41	P22215	453 aa		2.51	□□□□□ -2.01
YCS4	YLR272C	TUM1	Q08686	304 aa	Known RBP	2.51	□□□□□ -2.01
YCS4	YLR272C	NPL4	P33755	580 aa		2.51	□□□□□ -2.01
YCS4	YLR272C	RPP1B	P10622	106 aa	Known RBP	2.51	□□□□□ -2.01
YCS4	YLR272C	YPR109W	Q06104	294 aa		2.51	□□□□□ -2.01
YCS4	YLR272C	YBL029C-A	Q3E756	94 aa		2.51	□□□□□ -2.01
YCS4	YLR272C	ECM23	Q02710	187 aa		2.5	□□□□□ -2.01
YCS4	YLR272C	MMP1	Q12372	583 aa		2.5	□□□□□ -2.01
YCS4	YLR272C	GCD11	P32481	527 aa	Known RBP	2.5	□□□□□ -2.01
YCS4	YLR272C	UBX7	P38349	436 aa		2.5	□□□□□ -2.01
YCS4	YLR272C	ITT1	Q04638	464 aa		2.5	□□□□□ -2.01
YCS4	YLR272C	YJU3	P28321	313 aa		2.49	□□□□□ -2.01
YCS4	YLR272C	ISF1	P32488	338 aa		2.49	□□□□□ -2.01
YCS4	YLR272C	GRS1	P38088	690 aa	Known RBP	2.49	□□□□□ -2.01
YCS4	YLR272C	CWC24	P53769	259 aa		2.49	□□□□□ -2.01
YCS4	YLR272C	VPS29	P38759	282 aa		2.49	□□□□□ -2.01
YCS4	YLR272C	ULI1	P43604	169 aa		2.49	□□□□□ -2.01
YCS4	YLR272C	YML083C	Q04526	418 aa		2.48	□□□□□ -2.01
YCS4	YLR272C	MAK21	Q12176	1025 aa	Known RBP	2.48	□□□□□ -2.01
YCS4	YLR272C	GLN1	P32288	370 aa	Known RBP	2.48	□□□□□ -2.01
YCS4	YLR272C	GEF1	P37020	779 aa		2.48	□□□□□ -2.01
YCS4	YLR272C	DSF2	P38213	736 aa		2.48	□□□□□ -2.01
YCS4	YLR272C	YAP5	P40574	245 aa		2.48	□□□□□ -2.01
YCS4	YLR272C	TIF1	P10081	395 aa	Known RBP	2.47	□□□□□ -2.01
YCS4	YLR272C	YRR1	Q12172	810 aa		2.47	□□□□□ -2.01
YCS4	YLR272C	SAP30	P38429	201 aa		2.47	□□□□□ -2.01
YCS4	YLR272C	UBP10	P53874	792 aa	Predicted RBP	2.47	□□□□□ -2.01
YCS4	YLR272C	CDC3	P32457	520 aa	Known RBP	2.46	□□□□□ -2.02
YCS4	YLR272C	YDJ1	P25491	409 aa	Known RBP	2.46	□□□□□ -2.02
YCS4	YLR272C	SUB2	Q07478	446 aa	Known RBP	2.45	□□□□□ -2.02
YCS4	YLR272C	VMA1	P17255	1071 aa	Known RBP	2.45	□□□□□ -2.02
YCS4	YLR272C	RAD59	Q12223	238 aa		2.45	□□□□□ -2.02
YCS4	YLR272C	MRX12	P47084	519 aa		2.45	□□□□□ -2.02
YCS4	YLR272C	KAR5	Q04746	504 aa		2.45	□□□□□ -2.02
YCS4	YLR272C	CDC73	Q06697	393 aa		2.45	□□□□□ -2.02
YCS4	YLR272C	YLR326W	Q06170	240 aa	Known RBP	2.44	□□□□□ -2.02
YCS4	YLR272C	FOX2	Q02207	900 aa	Known RBP	2.43	□□□□□ -2.02
YCS4	YLR272C	NUP42	P49686	430 aa	Known RBP	2.43	□□□□□ -2.02
YCS4	YLR272C	BIO2	P32451	375 aa		2.43	□□□□□ -2.02
YCS4	YLR272C	PPG1	P32838	368 aa		2.43	□□□□□ -2.02
YCS4	YLR272C	ENO1	P00924	437 aa	Known RBP	2.42	□□□□□ -2.02
YCS4	YLR272C	HTA1	P04911	132 aa	Known RBP	2.42	□□□□□ -2.02
YCS4	YLR272C	HTA2	P04912	132 aa		2.42	□□□□□ -2.02
YCS4	YLR272C	KEX1	P09620	729 aa		2.42	□□□□□ -2.02
YCS4	YLR272C	KEX2	P13134	814 aa		2.42	□□□□□ -2.02
YCS4	YLR272C	GUT1	P32190	709 aa		2.42	□□□□□ -2.02
YCS4	YLR272C	YCK3	P39962	524 aa		2.42	□□□□□ -2.02
YCS4	YLR272C	AIM7	Q12156	149 aa		2.42	□□□□□ -2.02
YCS4	YLR272C	COX6	P00427	148 aa		2.42	□□□□□ -2.02
YCS4	YLR272C	DAT1	P13483	248 aa	Known RBP	2.42	□□□□□ -2.02
YCS4	YLR272C	FPK1	P53739	893 aa		2.42	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 89.4 ms