RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeastyeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRB1YEL060C YBT1P32386 1661 aa9.37□□□□□ -0.91
PRB1YEL060C VTH1P40438 1549 aa9.37□□□□□ -0.91
PRB1YEL060C VTH2P40890 1549 aa9.37□□□□□ -0.91
PRB1YEL060C ESC1Q03661 1658 aaKnown RBP9.37□□□□□ -0.91
PRB1YEL060C NOP7P53261 605 aaKnown RBP9.35□□□□□ -0.91
PRB1YEL060C TY1B-HO13535 1793 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-DR5P0C2I2 1755 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-DR6P0C2I3 1755 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-LR2P0C2I5 1755 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-LR3P0C2I6 1755 aaKnown RBP9.33□□□□□ -0.92
PRB1YEL060C TY1B-PR1P0C2I9 1755 aaKnown RBP9.33□□□□□ -0.92
PRB1YEL060C TY1B-PR2P0C2J0 1756 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-PR3P0C2J1 1755 aaKnown RBP9.33□□□□□ -0.92
PRB1YEL060C TY1B-JR1P47098 1755 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-ML2Q03434 1755 aaKnown RBP9.33□□□□□ -0.92
PRB1YEL060C TY1B-ER1Q03612 1755 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-ML1Q04711 1755 aaKnown RBP9.33□□□□□ -0.92
PRB1YEL060C TY1B-GR2Q12269 1755 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-OLQ12273 1755 aa9.33□□□□□ -0.92
PRB1YEL060C TY1B-PLQ12414 1755 aaKnown RBP9.33□□□□□ -0.92
PRB1YEL060C IME2P32581 645 aa9.33□□□□□ -0.92
PRB1YEL060C CAT8P39113 1433 aa9.33□□□□□ -0.92
PRB1YEL060C GCN2P15442 1659 aa9.32□□□□□ -0.92
PRB1YEL060C ORC1P54784 914 aaPredicted RBP9.29□□□□□ -0.92
PRB1YEL060C CLC1P17891 233 aa9.29□□□□□ -0.92
PRB1YEL060C PDR5P33302 1511 aaKnown RBP9.28□□□□□ -0.92
PRB1YEL060C RPC31P17890 251 aa9.27□□□□□ -0.93
PRB1YEL060C TY1B-BRQ12193 1756 aa9.27□□□□□ -0.93
PRB1YEL060C TY1B-GR3Q12316 1755 aa9.27□□□□□ -0.93
PRB1YEL060C TY1B-ORQ92393 1755 aa9.27□□□□□ -0.93
PRB1YEL060C IRC20Q06554 1556 aa9.27□□□□□ -0.93
PRB1YEL060C GEA2P39993 1459 aaKnown RBP9.26□□□□□ -0.93
PRB1YEL060C OPY1P38271 328 aa9.25□□□□□ -0.93
PRB1YEL060C YFR016CP43597 1233 aaKnown RBP9.25□□□□□ -0.93
PRB1YEL060C GDB1Q06625 1536 aa9.24□□□□□ -0.93
PRB1YEL060C FUN12P39730 1002 aaKnown RBP9.23□□□□□ -0.93
PRB1YEL060C PDS5Q04264 1277 aa9.23□□□□□ -0.93
PRB1YEL060C TY1B-JR2P47100 1755 aaKnown RBP9.22□□□□□ -0.93
PRB1YEL060C TY1B-ER2Q03619 1755 aa9.22□□□□□ -0.93
PRB1YEL060C TY1B-MR1Q04214 1755 aa9.22□□□□□ -0.93
PRB1YEL060C TY1B-MR2Q04670 1755 aaKnown RBP9.22□□□□□ -0.93
PRB1YEL060C TY1B-LR1Q12088 1755 aaKnown RBP9.22□□□□□ -0.93
PRB1YEL060C TY1B-NL1Q12112 1755 aa9.22□□□□□ -0.93
PRB1YEL060C TY1B-GR1Q12141 1755 aa9.22□□□□□ -0.93
PRB1YEL060C TY1B-BLQ12490 1755 aa9.22□□□□□ -0.93
PRB1YEL060C CKB1P43639 278 aa9.21□□□□□ -0.94
PRB1YEL060C ARO1P08566 1588 aaKnown RBP9.2□□□□□ -0.94
PRB1YEL060C EAF7P53911 425 aaKnown RBP9.2□□□□□ -0.94
PRB1YEL060C BUD21Q08492 214 aaPredicted RBP9.19□□□□□ -0.94
PRB1YEL060C SIS2P36024 562 aa9.19□□□□□ -0.94
PRB1YEL060C PAF1P38351 445 aa9.18□□□□□ -0.94
PRB1YEL060C TY3B-IQ7LHG5 1498 aaKnown RBP9.18□□□□□ -0.94
PRB1YEL060C LEO1P38439 464 aa9.17□□□□□ -0.94
PRB1YEL060C NST1P53935 1240 aa9.17□□□□□ -0.94
PRB1YEL060C CDC25P04821 1589 aa9.17□□□□□ -0.94
PRB1YEL060C IQG1Q12280 1495 aa9.15□□□□□ -0.94
PRB1YEL060C FPR3P38911 411 aaKnown RBP9.15□□□□□ -0.95
PRB1YEL060C CDC45Q08032 650 aa9.14□□□□□ -0.95
PRB1YEL060C RPP0P05317 312 aaKnown RBP9.13□□□□□ -0.95
PRB1YEL060C VPS27P40343 622 aaKnown RBP9.13□□□□□ -0.95
PRB1YEL060C TCB2P48231 1178 aa9.13□□□□□ -0.95
PRB1YEL060C PDR12Q02785 1511 aa9.13□□□□□ -0.95
PRB1YEL060C MMS1Q06211 1407 aa9.11□□□□□ -0.95
PRB1YEL060C RVB2Q12464 471 aaKnown RBP9.11□□□□□ -0.95
PRB1YEL060C SNF7P39929 240 aaKnown RBP9.11□□□□□ -0.95
PRB1YEL060C MNN4P36044 1178 aa9.1□□□□□ -0.95
PRB1YEL060C DMA1P38823 416 aa9.1□□□□□ -0.95
PRB1YEL060C YIR014WP40570 242 aa9.09□□□□□ -0.95
PRB1YEL060C ABP1P15891 592 aaKnown RBP9.08□□□□□ -0.96
PRB1YEL060C NTE1Q04958 1679 aa9.08□□□□□ -0.96
PRB1YEL060C RPO21P04050 1733 aaKnown RBP9.07□□□□□ -0.96
PRB1YEL060C LTE1P07866 1435 aa9.06□□□□□ -0.96
PRB1YEL060C BUD3P25558 1636 aa9.05□□□□□ -0.96
PRB1YEL060C TAF5P38129 798 aa9.05□□□□□ -0.96
PRB1YEL060C KIP3P53086 805 aaKnown RBP9.05□□□□□ -0.96
PRB1YEL060C YSP2Q06681 1438 aa9.04□□□□□ -0.96
PRB1YEL060C YOR093CQ12275 1648 aa9.03□□□□□ -0.96
PRB1YEL060C RTC1Q08281 1341 aa9.03□□□□□ -0.96
PRB1YEL060C ROX1P25042 368 aa9.03□□□□□ -0.96
PRB1YEL060C NAP1P25293 417 aaKnown RBP9.03□□□□□ -0.96
PRB1YEL060C YRB30P53107 440 aaPredicted RBP9.02□□□□□ -0.97
PRB1YEL060C RAV1P47104 1357 aa9.02□□□□□ -0.97
PRB1YEL060C NUP157P40064 1391 aaKnown RBP9.01□□□□□ -0.97
PRB1YEL060C YDL144CQ07589 356 aa9.01□□□□□ -0.97
PRB1YEL060C MET10P39692 1035 aa9□□□□□ -0.97
PRB1YEL060C IOC4Q04213 475 aa9□□□□□ -0.97
PRB1YEL060C ESL2P36168 1195 aa8.99□□□□□ -0.97
PRB1YEL060C SCT1P32784 759 aa8.98□□□□□ -0.97
PRB1YEL060C RPA190P10964 1664 aaKnown RBP8.98□□□□□ -0.97
PRB1YEL060C SPO14P36126 1683 aa8.97□□□□□ -0.97
PRB1YEL060C SUI2P20459 304 aaKnown RBP8.97□□□□□ -0.97
PRB1YEL060C DRS2P39524 1355 aa8.96□□□□□ -0.97
PRB1YEL060C PCT1P13259 424 aa8.95□□□□□ -0.98
PRB1YEL060C SLN1P39928 1220 aaPredicted RBP8.94□□□□□ -0.98
PRB1YEL060C DNF2Q12675 1612 aa8.94□□□□□ -0.98
PRB1YEL060C PDR11P40550 1411 aa8.94□□□□□ -0.98
PRB1YEL060C DJP1P40564 432 aa8.93□□□□□ -0.98
PRB1YEL060C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
PRB1YEL060C RTG3P38165 486 aa8.93□□□□□ -0.98
PRB1YEL060C CHC1P22137 1653 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms