RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPC2YDR213W PRS1P32895 427 aaKnown RBP5.66□□□□□ -1.5
UPC2YDR213W FUN12P39730 1002 aaKnown RBP5.66□□□□□ -1.5
UPC2YDR213W IFH1P39520 1085 aa5.65□□□□□ -1.5
UPC2YDR213W YAH1Q12184 172 aaKnown RBP5.65□□□□□ -1.5
UPC2YDR213W SPP41P38904 1435 aa5.65□□□□□ -1.51
UPC2YDR213W YRF1-1P0CX20 1796 aa5.64□□□□□ -1.51
UPC2YDR213W YRF1-5P0CX21 1796 aa5.64□□□□□ -1.51
UPC2YDR213W YRF1-8P0CX22 1796 aa5.64□□□□□ -1.51
UPC2YDR213W SCC2Q04002 1493 aa5.64□□□□□ -1.51
UPC2YDR213W STH1P32597 1359 aa5.63□□□□□ -1.51
UPC2YDR213W YKR023WP36119 530 aaKnown RBP5.63□□□□□ -1.51
UPC2YDR213W CST9Q06032 482 aa5.62□□□□□ -1.51
UPC2YDR213W ORC1P54784 914 aaPredicted RBP5.61□□□□□ -1.51
UPC2YDR213W CFT1Q06632 1357 aaKnown RBP5.61□□□□□ -1.51
UPC2YDR213W YFR016CP43597 1233 aaKnown RBP5.61□□□□□ -1.51
UPC2YDR213W PRY3P47033 881 aa5.61□□□□□ -1.51
UPC2YDR213W YTA7P40340 1379 aa5.61□□□□□ -1.51
UPC2YDR213W NUP170P38181 1502 aa5.61□□□□□ -1.51
UPC2YDR213W SPO14P36126 1683 aa5.61□□□□□ -1.51
UPC2YDR213W TY1B-HO13535 1793 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-DR5P0C2I2 1755 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-DR6P0C2I3 1755 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-LR2P0C2I5 1755 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-LR3P0C2I6 1755 aaKnown RBP5.6□□□□□ -1.51
UPC2YDR213W TY1B-PR1P0C2I9 1755 aaKnown RBP5.6□□□□□ -1.51
UPC2YDR213W TY1B-PR2P0C2J0 1756 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-PR3P0C2J1 1755 aaKnown RBP5.6□□□□□ -1.51
UPC2YDR213W TY1B-JR1P47098 1755 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-ML2Q03434 1755 aaKnown RBP5.6□□□□□ -1.51
UPC2YDR213W TY1B-ER1Q03612 1755 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-ML1Q04711 1755 aaKnown RBP5.6□□□□□ -1.51
UPC2YDR213W TY1B-GR2Q12269 1755 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-OLQ12273 1755 aa5.6□□□□□ -1.51
UPC2YDR213W TY1B-PLQ12414 1755 aaKnown RBP5.6□□□□□ -1.51
UPC2YDR213W PSD2P53037 1138 aaKnown RBP5.59□□□□□ -1.51
UPC2YDR213W TY2B-LR1P0C2J3 1770 aa5.59□□□□□ -1.52
UPC2YDR213W TY2B-FP0CX63 1770 aa5.59□□□□□ -1.52
UPC2YDR213W TY2B-GR2P0CX64 1770 aa5.59□□□□□ -1.52
UPC2YDR213W TY2B-CP25384 1770 aa5.59□□□□□ -1.52
UPC2YDR213W TY2B-DR2Q03494 1770 aa5.59□□□□□ -1.52
UPC2YDR213W TY1B-DR1Q03855 1755 aa5.59□□□□□ -1.52
UPC2YDR213W TY2B-DR3Q07791 1770 aaKnown RBP5.59□□□□□ -1.52
UPC2YDR213W TY2B-OR1Q12113 1770 aa5.59□□□□□ -1.52
UPC2YDR213W TY2B-DR1Q12472 1770 aa5.59□□□□□ -1.52
UPC2YDR213W TY2B-OR2Q12501 1770 aa5.59□□□□□ -1.52
UPC2YDR213W DMA2P53924 522 aa5.58□□□□□ -1.52
UPC2YDR213W SEC3P33332 1336 aaKnown RBP5.57□□□□□ -1.52
UPC2YDR213W AAD16Q02895 342 aa5.56□□□□□ -1.52
UPC2YDR213W TSR3Q12094 313 aaKnown RBP5.56□□□□□ -1.52
UPC2YDR213W POL1P13382 1468 aa5.56□□□□□ -1.52
UPC2YDR213W DNF3Q12674 1656 aa5.55□□□□□ -1.52
UPC2YDR213W PDR10P51533 1564 aa5.55□□□□□ -1.52
UPC2YDR213W IME2P32581 645 aa5.54□□□□□ -1.52
UPC2YDR213W HAP1P0CE41 1502 aa5.54□□□□□ -1.52
UPC2YDR213W MGA2P40578 1113 aa5.54□□□□□ -1.52
UPC2YDR213W RPO21P04050 1733 aaKnown RBP5.52□□□□□ -1.53
UPC2YDR213W CLC1P17891 233 aa5.52□□□□□ -1.53
UPC2YDR213W RPC31P17890 251 aa5.51□□□□□ -1.53
UPC2YDR213W NUP159P40477 1460 aa5.5□□□□□ -1.53
UPC2YDR213W SNT2P53127 1403 aa5.5□□□□□ -1.53
UPC2YDR213W DCD1P06773 312 aa5.49□□□□□ -1.53
UPC2YDR213W SIS2P36024 562 aa5.49□□□□□ -1.53
UPC2YDR213W OPY1P38271 328 aa5.49□□□□□ -1.53
UPC2YDR213W TY2B-BQ12491 1770 aa5.48□□□□□ -1.53
UPC2YDR213W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
UPC2YDR213W TSC11P40061 1430 aa5.48□□□□□ -1.53
UPC2YDR213W BUD3P25558 1636 aa5.47□□□□□ -1.53
UPC2YDR213W GEA1P47102 1408 aaPredicted RBP5.47□□□□□ -1.53
UPC2YDR213W RSM7P47150 247 aa5.47□□□□□ -1.53
UPC2YDR213W SNQ2P32568 1501 aaKnown RBP5.47□□□□□ -1.53
UPC2YDR213W TY1B-NL2Q99337 1749 aaKnown RBP5.46□□□□□ -1.54
UPC2YDR213W HOP09932 586 aa5.46□□□□□ -1.54
UPC2YDR213W RAM2P29703 316 aa5.45□□□□□ -1.54
UPC2YDR213W YIL055CP40523 627 aaKnown RBP5.45□□□□□ -1.54
UPC2YDR213W SMC4Q12267 1418 aa5.45□□□□□ -1.54
UPC2YDR213W MNN4P36044 1178 aa5.45□□□□□ -1.54
UPC2YDR213W EAF7P53911 425 aaKnown RBP5.45□□□□□ -1.54
UPC2YDR213W YOR1P53049 1477 aa5.44□□□□□ -1.54
UPC2YDR213W NST1P53935 1240 aa5.44□□□□□ -1.54
UPC2YDR213W TFC8Q12308 588 aa5.44□□□□□ -1.54
UPC2YDR213W RCR1P38212 213 aa5.44□□□□□ -1.54
UPC2YDR213W SRB8P25648 1427 aa5.43□□□□□ -1.54
UPC2YDR213W MLP2P40457 1679 aa5.43□□□□□ -1.54
UPC2YDR213W GDB1Q06625 1536 aa5.43□□□□□ -1.54
UPC2YDR213W MYO4P32492 1471 aa5.42□□□□□ -1.54
UPC2YDR213W AIM44Q99299 758 aa5.42□□□□□ -1.54
UPC2YDR213W TCB2P48231 1178 aa5.41□□□□□ -1.54
UPC2YDR213W RPN1P38764 993 aaKnown RBP5.41□□□□□ -1.54
UPC2YDR213W DJP1P40564 432 aa5.41□□□□□ -1.54
UPC2YDR213W TY1B-JR2P47100 1755 aaKnown RBP5.4□□□□□ -1.54
UPC2YDR213W TY1B-ER2Q03619 1755 aa5.4□□□□□ -1.54
UPC2YDR213W TY1B-MR1Q04214 1755 aa5.4□□□□□ -1.54
UPC2YDR213W TY1B-MR2Q04670 1755 aaKnown RBP5.4□□□□□ -1.54
UPC2YDR213W TY1B-LR1Q12088 1755 aaKnown RBP5.4□□□□□ -1.54
UPC2YDR213W TY1B-NL1Q12112 1755 aa5.4□□□□□ -1.54
UPC2YDR213W TY1B-GR1Q12141 1755 aa5.4□□□□□ -1.54
UPC2YDR213W TY1B-BLQ12490 1755 aa5.4□□□□□ -1.54
UPC2YDR213W TY1B-DR3Q99231 1755 aa5.4□□□□□ -1.54
UPC2YDR213W TOP2P06786 1428 aaKnown RBP5.39□□□□□ -1.55
UPC2YDR213W CHC1P22137 1653 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms