RNA–Protein interactions for RNA: YDR119W

VBA4, Transcript of Protein of unknown function, yeast

Gene VBA4, Length 2,307 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA4	YDR119W	DOS2	P54858	310 aa		4.36	□□□□□ -1.71
VBA4	YDR119W	SEN54	Q02825	467 aa	Predicted RBP	4.36	□□□□□ -1.71
VBA4	YDR119W	HO	P09932	586 aa		4.35	□□□□□ -1.71
VBA4	YDR119W	AAD16	Q02895	342 aa		4.35	□□□□□ -1.71
VBA4	YDR119W	TSR3	Q12094	313 aa	Known RBP	4.35	□□□□□ -1.71
VBA4	YDR119W	RPL34B	P40525	121 aa	Known RBP	4.35	□□□□□ -1.71
VBA4	YDR119W	FAR11	P53917	953 aa		4.35	□□□□□ -1.71
VBA4	YDR119W	TFC8	Q12308	588 aa		4.35	□□□□□ -1.71
VBA4	YDR119W	MRM1	P25270	412 aa		4.34	□□□□□ -1.71
VBA4	YDR119W	CPS1	P27614	576 aa		4.34	□□□□□ -1.71
VBA4	YDR119W	NUG1	P40010	520 aa	Known RBP	4.34	□□□□□ -1.71
VBA4	YDR119W	COX6	P00427	148 aa		4.33	□□□□□ -1.72
VBA4	YDR119W	COQ8	P27697	501 aa		4.33	□□□□□ -1.72
VBA4	YDR119W	RTG3	P38165	486 aa		4.33	□□□□□ -1.72
VBA4	YDR119W	OCA5	P38738	679 aa		4.33	□□□□□ -1.72
VBA4	YDR119W	TIF1	P10081	395 aa	Known RBP	4.32	□□□□□ -1.72
VBA4	YDR119W	CSN12	P47130	423 aa		4.32	□□□□□ -1.72
VBA4	YDR119W	RTS3	P53289	263 aa		4.32	□□□□□ -1.72
VBA4	YDR119W	ITT1	Q04638	464 aa		4.32	□□□□□ -1.72
VBA4	YDR119W	ERG12	P07277	443 aa		4.32	□□□□□ -1.72
VBA4	YDR119W	ATG36	P46983	293 aa		4.32	□□□□□ -1.72
VBA4	YDR119W	NOB1	Q08444	459 aa	Known RBP	4.32	□□□□□ -1.72
VBA4	YDR119W	NOP53	Q12080	455 aa	Known RBP	4.32	□□□□□ -1.72
VBA4	YDR119W	TTI1	P36097	1038 aa		4.31	□□□□□ -1.72
VBA4	YDR119W	DCD1	P06773	312 aa		4.3	□□□□□ -1.72
VBA4	YDR119W	SUB1	P54000	292 aa	Known RBP	4.3	□□□□□ -1.72
VBA4	YDR119W	LAM6	Q08001	693 aa		4.3	□□□□□ -1.72
VBA4	YDR119W	HAT1	Q12341	374 aa		4.3	□□□□□ -1.72
VBA4	YDR119W	ASF1	P32447	279 aa		4.3	□□□□□ -1.72
VBA4	YDR119W	FPR4	Q06205	392 aa	Predicted RBP	4.3	□□□□□ -1.72
VBA4	YDR119W	YPR204W	Q08995	1032 aa		4.3	□□□□□ -1.72
VBA4	YDR119W	SWE1	P32944	819 aa		4.29	□□□□□ -1.72
VBA4	YDR119W	YAF9	P53930	226 aa		4.29	□□□□□ -1.72
VBA4	YDR119W	VPS72	Q03388	795 aa		4.28	□□□□□ -1.72
VBA4	YDR119W	ALD4	P46367	519 aa	Known RBP	4.28	□□□□□ -1.72
VBA4	YDR119W	YJR008W	P47085	338 aa		4.28	□□□□□ -1.72
VBA4	YDR119W	FAP1	P53971	965 aa		4.28	□□□□□ -1.72
VBA4	YDR119W	RTG2	P32608	588 aa	Known RBP	4.27	□□□□□ -1.73
VBA4	YDR119W	NMD2	P38798	1089 aa	Known RBP	4.27	□□□□□ -1.73
VBA4	YDR119W	YBL036C	P38197	257 aa		4.27	□□□□□ -1.73
VBA4	YDR119W	UBP14	P38237	781 aa	Known RBP	4.27	□□□□□ -1.73
VBA4	YDR119W	NNF1	P47149	201 aa		4.27	□□□□□ -1.73
VBA4	YDR119W	IPL1	P38991	367 aa		4.26	□□□□□ -1.73
VBA4	YDR119W	STM1	P39015	273 aa	Known RBP	4.26	□□□□□ -1.73
VBA4	YDR119W	BCH2	P36122	765 aa		4.26	□□□□□ -1.73
VBA4	YDR119W	YML083C	Q04526	418 aa		4.26	□□□□□ -1.73
VBA4	YDR119W	KEX1	P09620	729 aa		4.25	□□□□□ -1.73
VBA4	YDR119W	MIF2	P35201	549 aa		4.25	□□□□□ -1.73
VBA4	YDR119W	ALD2	P47771	506 aa		4.25	□□□□□ -1.73
VBA4	YDR119W	SEC20	P28791	383 aa		4.24	□□□□□ -1.73
VBA4	YDR119W	BIO2	P32451	375 aa		4.24	□□□□□ -1.73
VBA4	YDR119W	CST6	P40535	587 aa		4.24	□□□□□ -1.73
VBA4	YDR119W	PUP1	P25043	261 aa		4.24	□□□□□ -1.73
VBA4	YDR119W	EPS1	P40557	701 aa		4.23	□□□□□ -1.73
VBA4	YDR119W	OSW7	P43611	510 aa		4.23	□□□□□ -1.73
VBA4	YDR119W	KTR1	P27810	393 aa	Known RBP	4.23	□□□□□ -1.73
VBA4	YDR119W	EDS1	P38073	919 aa		4.22	□□□□□ -1.73
VBA4	YDR119W	SVF1	Q05515	481 aa		4.22	□□□□□ -1.73
VBA4	YDR119W	PSE1	P32337	1089 aa	Known RBP	4.22	□□□□□ -1.73
VBA4	YDR119W	VPS29	P38759	282 aa		4.22	□□□□□ -1.73
VBA4	YDR119W	YNL108C	P53929	270 aa		4.22	□□□□□ -1.73
VBA4	YDR119W	RNH70	P53331	553 aa		4.21	□□□□□ -1.74
VBA4	YDR119W	SIS2	P36024	562 aa		4.21	□□□□□ -1.74
VBA4	YDR119W	YDR090C	Q03193	310 aa		4.21	□□□□□ -1.74
VBA4	YDR119W	GIN4	Q12263	1142 aa		4.21	□□□□□ -1.74
VBA4	YDR119W	YBL113C	Q7M4S9	792 aa		4.21	□□□□□ -1.74
VBA4	YDR119W	RRP15	Q06511	250 aa	Predicted RBP	4.2	□□□□□ -1.74
VBA4	YDR119W	UBX5	Q06682	500 aa		4.2	□□□□□ -1.74
VBA4	YDR119W	MSC6	Q08818	692 aa	Known RBP	4.2	□□□□□ -1.74
VBA4	YDR119W	TYW1	Q08960	810 aa	Known RBP	4.2	□□□□□ -1.74
VBA4	YDR119W	TOM20	P35180	183 aa		4.2	□□□□□ -1.74
VBA4	YDR119W	YOL098C	Q12496	1037 aa		4.2	□□□□□ -1.74
VBA4	YDR119W	CSE4	P36012	229 aa		4.19	□□□□□ -1.74
VBA4	YDR119W	RRP14	P36080	434 aa	Known RBP	4.19	□□□□□ -1.74
VBA4	YDR119W	VHR2	P40041	505 aa		4.19	□□□□□ -1.74
VBA4	YDR119W	POL32	P47110	350 aa		4.19	□□□□□ -1.74
VBA4	YDR119W	BUD21	Q08492	214 aa	Predicted RBP	4.19	□□□□□ -1.74
VBA4	YDR119W	BDF1	P35817	686 aa		4.18	□□□□□ -1.74
VBA4	YDR119W	TEA1	P47988	759 aa		4.18	□□□□□ -1.74
VBA4	YDR119W	TPO2	P53283	614 aa		4.18	□□□□□ -1.74
VBA4	YDR119W	ENO1	P00924	437 aa	Known RBP	4.18	□□□□□ -1.74
VBA4	YDR119W	SUP45	P12385	437 aa	Known RBP	4.18	□□□□□ -1.74
VBA4	YDR119W	ATE1	P16639	503 aa		4.18	□□□□□ -1.74
VBA4	YDR119W	PPG1	P32838	368 aa		4.18	□□□□□ -1.74
VBA4	YDR119W	ERP5	P38819	212 aa		4.18	□□□□□ -1.74
VBA4	YDR119W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	RIP-Chip
VBA4	YDR119W	MAK16	P10962	306 aa	Predicted RBP	4.17	□□□□□ -1.74
VBA4	YDR119W	MRPL32	P25348	183 aa		4.17	□□□□□ -1.74
VBA4	YDR119W	TGL4	P36165	910 aa		4.17	□□□□□ -1.74
VBA4	YDR119W	FPR3	P38911	411 aa	Known RBP	4.17	□□□□□ -1.74
VBA4	YDR119W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
VBA4	YDR119W	CDC27	P38042	758 aa		4.17	□□□□□ -1.74
VBA4	YDR119W	KIC1	P38692	1080 aa		4.17	□□□□□ -1.74
VBA4	YDR119W	MDG1	P53885	366 aa		4.17	□□□□□ -1.74
VBA4	YDR119W	PDR1	P12383	1068 aa		4.16	□□□□□ -1.74
VBA4	YDR119W	TSR4	P25040	408 aa		4.16	□□□□□ -1.74
VBA4	YDR119W	PTC3	P34221	468 aa	Known RBP	4.16	□□□□□ -1.74
VBA4	YDR119W	JIP5	Q06214	492 aa	Predicted RBP	4.16	□□□□□ -1.74
VBA4	YDR119W	OYE2	Q03558	400 aa	Known RBP	4.16	□□□□□ -1.74
VBA4	YDR119W	RAD59	Q12223	238 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms