RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C HTA1P04911 132 aaKnown RBP8.65□□□□□ -1.02
SHU2YDR078C HTA2P04912 132 aa8.65□□□□□ -1.02
SHU2YDR078C DCW1P36091 449 aa8.65□□□□□ -1.02
SHU2YDR078C PRE3P38624 215 aa8.62□□□□□ -1.03
SHU2YDR078C PTC4P38089 393 aa8.61□□□□□ -1.03
SHU2YDR078C YEL023CP39992 682 aa8.61□□□□□ -1.03
SHU2YDR078C YDR344CQ05510 147 aa8.54□□□□□ -1.04
SHU2YDR078C GRE2Q12068 342 aaKnown RBP8.47□□□□□ -1.05
SHU2YDR078C VRP1P37370 817 aa8.46□□□□□ -1.06
SHU2YDR078C PML39Q03760 334 aa8.46□□□□□ -1.06
SHU2YDR078C XDJ1P39102 459 aa8.44□□□□□ -1.06
SHU2YDR078C ELP4Q02884 456 aaKnown RBP8.42□□□□□ -1.06
SHU2YDR078C MIF2P35201 549 aa8.39□□□□□ -1.07
SHU2YDR078C EDS1P38073 919 aa8.38□□□□□ -1.07
SHU2YDR078C ATH1P48016 1211 aa8.37□□□□□ -1.07
SHU2YDR078C PTC3P34221 468 aaKnown RBP8.36□□□□□ -1.07
SHU2YDR078C GUT1P32190 709 aa8.35□□□□□ -1.07
SHU2YDR078C MID1P41821 548 aa8.35□□□□□ -1.07
SHU2YDR078C NST1P53935 1240 aa8.35□□□□□ -1.07
SHU2YDR078C MAK11P20484 414 aaKnown RBP8.34□□□□□ -1.07
SHU2YDR078C ARH1P48360 493 aa8.34□□□□□ -1.07
SHU2YDR078C RAM2P29703 316 aa8.32□□□□□ -1.08
SHU2YDR078C DMA1P38823 416 aa8.32□□□□□ -1.08
SHU2YDR078C DPS1P04802 557 aaKnown RBP8.3□□□□□ -1.08
SHU2YDR078C SOL3P38858 249 aa8.29□□□□□ -1.08
SHU2YDR078C COQ8P27697 501 aa8.24□□□□□ -1.09
SHU2YDR078C SPT23P35210 1082 aa8.24□□□□□ -1.09
SHU2YDR078C MPH3P0CE00 602 aa8.23□□□□□ -1.09
SHU2YDR078C ILV3P39522 585 aaKnown RBP8.23□□□□□ -1.09
SHU2YDR078C PEX29Q03370 554 aa8.22□□□□□ -1.09
SHU2YDR078C AI4P03878 556 aa8.21□□□□□ -1.1
SHU2YDR078C HAP5Q02516 242 aa8.18□□□□□ -1.1
SHU2YDR078C SRC1Q03707 834 aa8.16□□□□□ -1.1
SHU2YDR078C BNI4P53858 892 aa8.14□□□□□ -1.11
SHU2YDR078C MPC54Q08550 464 aa8.12□□□□□ -1.11
SHU2YDR078C YML082WQ04533 649 aaKnown RBP8.11□□□□□ -1.11
SHU2YDR078C YGR273CP53329 174 aa8.1□□□□□ -1.11
SHU2YDR078C PTC2P39966 464 aaKnown RBP8.09□□□□□ -1.11
SHU2YDR078C NMA111P53920 997 aa8.05□□□□□ -1.12
SHU2YDR078C SLI15P38283 698 aa8.03□□□□□ -1.12
SHU2YDR078C NOP53Q12080 455 aaKnown RBP8.03□□□□□ -1.12
SHU2YDR078C RGA2Q06407 1009 aa8.01□□□□□ -1.13
SHU2YDR078C DPL1Q05567 589 aa7.99□□□□□ -1.13
SHU2YDR078C YPR015CQ12531 247 aa7.99□□□□□ -1.13
SHU2YDR078C RAS1P01119 309 aa7.97□□□□□ -1.13
SHU2YDR078C RAM1P22007 431 aa7.93□□□□□ -1.14
SHU2YDR078C RGA1P39083 1007 aa7.93□□□□□ -1.14
SHU2YDR078C KEX1P09620 729 aa7.89□□□□□ -1.15
SHU2YDR078C ISU2Q12056 156 aa7.89□□□□□ -1.15
SHU2YDR078C CDC73Q06697 393 aa7.86□□□□□ -1.15
SHU2YDR078C GYP1Q08484 637 aa7.83□□□□□ -1.16
SHU2YDR078C PDR1P12383 1068 aa7.82□□□□□ -1.16
SHU2YDR078C AMS1P22855 1083 aa7.82□□□□□ -1.16
SHU2YDR078C TAF7Q05021 590 aa7.81□□□□□ -1.16
SHU2YDR078C SDH2P21801 266 aa7.8□□□□□ -1.16
SHU2YDR078C TRK1P12685 1235 aa7.79□□□□□ -1.16
SHU2YDR078C LEO1P38439 464 aa7.79□□□□□ -1.16
SHU2YDR078C YLR326WQ06170 240 aaKnown RBP7.79□□□□□ -1.16
SHU2YDR078C SAS10Q12136 610 aaPredicted RBP7.79□□□□□ -1.16
SHU2YDR078C UBP14P38237 781 aaKnown RBP7.78□□□□□ -1.16
SHU2YDR078C VHR2P40041 505 aa7.75□□□□□ -1.17
SHU2YDR078C PCS60P38137 543 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
SHU2YDR078C SAS4Q04003 481 aa7.73□□□□□ -1.17
SHU2YDR078C SET1P38827 1080 aaKnown RBP7.71□□□□□ -1.18
SHU2YDR078C LEU3P08638 886 aa7.69□□□□□ -1.18
SHU2YDR078C RAD54P32863 898 aa7.69□□□□□ -1.18
SHU2YDR078C YEL077CQ3E7X8 1277 aa7.66□□□□□ -1.18
SHU2YDR078C BUD20Q08004 166 aaPredicted RBP7.64□□□□□ -1.19
SHU2YDR078C RPP1BP10622 106 aaKnown RBP7.63□□□□□ -1.19
SHU2YDR078C MRF1P30775 413 aaPredicted RBP7.61□□□□□ -1.19
SHU2YDR078C YDR090CQ03193 310 aa7.6□□□□□ -1.19
SHU2YDR078C YRR1Q12172 810 aa7.6□□□□□ -1.19
SHU2YDR078C PRT1P06103 763 aaKnown RBP7.59□□□□□ -1.19
SHU2YDR078C STR2P47164 639 aa7.59□□□□□ -1.19
SHU2YDR078C ISM1P48526 1002 aa7.57□□□□□ -1.2
SHU2YDR078C YPL062WQ02781 134 aa7.56□□□□□ -1.2
SHU2YDR078C GAP1P19145 602 aaPredicted RBP7.55□□□□□ -1.2
SHU2YDR078C PEX21P50091 288 aa7.54□□□□□ -1.2
SHU2YDR078C AIR1P40507 360 aaKnown RBP7.53□□□□□ -1.2
SHU2YDR078C NUD1P32336 851 aa7.52□□□□□ -1.21
SHU2YDR078C KIC1P38692 1080 aa7.52□□□□□ -1.21
SHU2YDR078C CLA4P48562 842 aa7.52□□□□□ -1.21
SHU2YDR078C ERG12P07277 443 aa7.51□□□□□ -1.21
SHU2YDR078C CST6P40535 587 aa7.51□□□□□ -1.21
SHU2YDR078C TUM1Q08686 304 aaKnown RBP7.51□□□□□ -1.21
SHU2YDR078C TFB4Q12004 338 aa7.51□□□□□ -1.21
SHU2YDR078C BRE2P43132 505 aa7.5□□□□□ -1.21
SHU2YDR078C CSC1Q06538 782 aa7.5□□□□□ -1.21
SHU2YDR078C YPR148CQ06523 435 aa7.49□□□□□ -1.21
SHU2YDR078C TY1A-DR4O74302 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-HP0C2I4 478 aaKnown RBP7.46□□□□□ -1.22
SHU2YDR078C TY1A-AP0CX57 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-PR1P0CX58 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-ORP0CX59 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-PR2P0CX60 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-DR5P0CX65 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-ER2P0CX66 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-GR3P0CX67 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-LR1P0CX68 440 aa7.46□□□□□ -1.22
SHU2YDR078C TY1A-MR2P0CX69 440 aa7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms