RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C VRP1P37370 817 aa11.4□□□□□ -0.58
YDR008CYDR008C PTC4P38089 393 aa11.4□□□□□ -0.58
YDR008CYDR008C SSP1P38871 571 aa11.4□□□□□ -0.58
YDR008CYDR008C YEL023CP39992 682 aa11.4□□□□□ -0.58
YDR008CYDR008C ABP1P15891 592 aaKnown RBP11.39□□□□□ -0.59
YDR008CYDR008C XDJ1P39102 459 aa11.38□□□□□ -0.59
YDR008CYDR008C MGA2P40578 1113 aa11.29□□□□□ -0.6
YDR008CYDR008C DPS1P04802 557 aaKnown RBP11.24□□□□□ -0.61
YDR008CYDR008C PML39Q03760 334 aa11.24□□□□□ -0.61
YDR008CYDR008C ELP4Q02884 456 aaKnown RBP11.22□□□□□ -0.61
YDR008CYDR008C RGA2Q06407 1009 aa11.21□□□□□ -0.61
YDR008CYDR008C TFA1P36100 482 aa11.17□□□□□ -0.62
YDR008CYDR008C SRC1Q03707 834 aa11.08□□□□□ -0.64
YDR008CYDR008C MID1P41821 548 aa11.06□□□□□ -0.64
YDR008CYDR008C ARH1P48360 493 aa11.06□□□□□ -0.64
YDR008CYDR008C GRE2Q12068 342 aaKnown RBP11.06□□□□□ -0.64
YDR008CYDR008C NST1P53935 1240 aa10.96□□□□□ -0.65
YDR008CYDR008C RGA1P39083 1007 aa10.95□□□□□ -0.66
YDR008CYDR008C SPT23P35210 1082 aa10.92□□□□□ -0.66
YDR008CYDR008C ATH1P48016 1211 aa10.91□□□□□ -0.66
YDR008CYDR008C MIF2P35201 549 aa10.9□□□□□ -0.66
YDR008CYDR008C GUT1P32190 709 aa10.89□□□□□ -0.67
YDR008CYDR008C EDS1P38073 919 aa10.89□□□□□ -0.67
YDR008CYDR008C PTC3P34221 468 aaKnown RBP10.87□□□□□ -0.67
YDR008CYDR008C SOL3P38858 249 aa10.86□□□□□ -0.67
YDR008CYDR008C PEX29Q03370 554 aa10.84□□□□□ -0.67
YDR008CYDR008C HAP5Q02516 242 aa10.81□□□□□ -0.68
YDR008CYDR008C ILV3P39522 585 aaKnown RBP10.79□□□□□ -0.68
YDR008CYDR008C MPH3P0CE00 602 aa10.76□□□□□ -0.69
YDR008CYDR008C BNI4P53858 892 aa10.75□□□□□ -0.69
YDR008CYDR008C YML082WQ04533 649 aaKnown RBP10.74□□□□□ -0.69
YDR008CYDR008C AI4P03878 556 aa10.73□□□□□ -0.69
YDR008CYDR008C MAK11P20484 414 aaKnown RBP10.73□□□□□ -0.69
YDR008CYDR008C RAS1P01119 309 aa10.72□□□□□ -0.69
YDR008CYDR008C PTC2P39966 464 aaKnown RBP10.72□□□□□ -0.69
YDR008CYDR008C RAM2P29703 316 aa10.69□□□□□ -0.7
YDR008CYDR008C MPC54Q08550 464 aa10.67□□□□□ -0.7
YDR008CYDR008C COQ8P27697 501 aa10.62□□□□□ -0.71
YDR008CYDR008C NMA111P53920 997 aa10.6□□□□□ -0.71
YDR008CYDR008C YPR015CQ12531 247 aa10.57□□□□□ -0.72
YDR008CYDR008C YGR273CP53329 174 aa10.52□□□□□ -0.73
YDR008CYDR008C SLI15P38283 698 aa10.48□□□□□ -0.73
YDR008CYDR008C RAM1P22007 431 aa10.46□□□□□ -0.73
YDR008CYDR008C DPL1Q05567 589 aa10.46□□□□□ -0.73
YDR008CYDR008C TRK1P12685 1235 aa10.44□□□□□ -0.74
YDR008CYDR008C AMS1P22855 1083 aa10.41□□□□□ -0.74
YDR008CYDR008C SDH2P21801 266 aa10.36□□□□□ -0.75
YDR008CYDR008C GYP1Q08484 637 aa10.34□□□□□ -0.75
YDR008CYDR008C ISU2Q12056 156 aa10.3□□□□□ -0.76
YDR008CYDR008C PDR1P12383 1068 aa10.27□□□□□ -0.77
YDR008CYDR008C YPL062WQ02781 134 aa10.27□□□□□ -0.77
YDR008CYDR008C CDC73Q06697 393 aa10.26□□□□□ -0.77
YDR008CYDR008C NOP53Q12080 455 aaKnown RBP10.25□□□□□ -0.77
YDR008CYDR008C KEX1P09620 729 aa10.22□□□□□ -0.77
YDR008CYDR008C SAS4Q04003 481 aa10.15□□□□□ -0.78
YDR008CYDR008C YEL077CQ3E7X8 1277 aa10.11□□□□□ -0.79
YDR008CYDR008C YLR326WQ06170 240 aaKnown RBP10.03□□□□□ -0.8
YDR008CYDR008C AIR1P40507 360 aaKnown RBP10.02□□□□□ -0.81
YDR008CYDR008C GAR1P28007 205 aaKnown RBP10.01□□□□□ -0.81
YDR008CYDR008C UBP14P38237 781 aaKnown RBP10.01□□□□□ -0.81
YDR008CYDR008C BUD20Q08004 166 aaPredicted RBP10.01□□□□□ -0.81
YDR008CYDR008C BRE2P43132 505 aa9.99□□□□□ -0.81
YDR008CYDR008C PCS60P38137 543 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
YDR008CYDR008C CLA4P48562 842 aa9.98□□□□□ -0.81
YDR008CYDR008C MRF1P30775 413 aaPredicted RBP9.97□□□□□ -0.81
YDR008CYDR008C VHR2P40041 505 aa9.97□□□□□ -0.81
YDR008CYDR008C PRT1P06103 763 aaKnown RBP9.92□□□□□ -0.82
YDR008CYDR008C CST6P40535 587 aa9.91□□□□□ -0.82
YDR008CYDR008C GBP2P25555 427 aaKnown RBP RIP-Chip data9.9□□□□□ -0.82not detected
YDR008CYDR008C STR2P47164 639 aa9.9□□□□□ -0.82
YDR008CYDR008C RAD54P32863 898 aa9.87□□□□□ -0.83
YDR008CYDR008C ISM1P48526 1002 aa9.87□□□□□ -0.83
YDR008CYDR008C YRR1Q12172 810 aa9.87□□□□□ -0.83
YDR008CYDR008C GCR2Q01722 534 aa9.86□□□□□ -0.83
YDR008CYDR008C ERG12P07277 443 aa9.85□□□□□ -0.83
YDR008CYDR008C RPP1BP10622 106 aaKnown RBP9.79□□□□□ -0.84
YDR008CYDR008C LAM6Q08001 693 aa9.79□□□□□ -0.84
YDR008CYDR008C MET22P32179 357 aa9.76□□□□□ -0.85
YDR008CYDR008C NUD1P32336 851 aa9.74□□□□□ -0.85
YDR008CYDR008C SET1P38827 1080 aaKnown RBP9.74□□□□□ -0.85
YDR008CYDR008C PEX21P50091 288 aa9.73□□□□□ -0.85
YDR008CYDR008C YDR090CQ03193 310 aa9.73□□□□□ -0.85
YDR008CYDR008C FRK1Q03002 865 aaPredicted RBP9.72□□□□□ -0.85
YDR008CYDR008C TY1A-DR4O74302 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-HP0C2I4 478 aaKnown RBP9.71□□□□□ -0.86
YDR008CYDR008C TY1A-AP0CX57 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-PR1P0CX58 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-ORP0CX59 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-PR2P0CX60 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-DR5P0CX65 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-ER2P0CX66 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-GR3P0CX67 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-LR1P0CX68 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-MR2P0CX69 440 aa9.71□□□□□ -0.86
YDR008CYDR008C GAP1P19145 602 aaPredicted RBP9.71□□□□□ -0.86
YDR008CYDR008C TY1A-JR2P47099 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-DR1Q03856 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-ML1Q04706 440 aaKnown RBP9.71□□□□□ -0.86
YDR008CYDR008C TUM1Q08686 304 aaKnown RBP9.71□□□□□ -0.86
YDR008CYDR008C TY1A-BRQ12217 440 aa9.71□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms