RNA–Protein interactions for RNA: YBR253W

SRB6, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB6, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB6YBR253W YJL007CP47080 104 aa7.01□□□□□ -1.29
SRB6YBR253W MRX12P47084 519 aa7□□□□□ -1.29
SRB6YBR253W SSA2P10592 639 aaKnown RBP6.99□□□□□ -1.29
SRB6YBR253W SSA4P22202 642 aaKnown RBP6.99□□□□□ -1.29
SRB6YBR253W NOP7P53261 605 aaKnown RBP6.99□□□□□ -1.29
SRB6YBR253W STS1P38637 319 aa6.98□□□□□ -1.29
SRB6YBR253W CSN12P47130 423 aa6.96□□□□□ -1.3
SRB6YBR253W ERG12P07277 443 aa6.95□□□□□ -1.3
SRB6YBR253W YMR1P47147 688 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
SRB6YBR253W SCY1P53009 804 aa6.95□□□□□ -1.3
SRB6YBR253W CPS1P27614 576 aa6.94□□□□□ -1.3
SRB6YBR253W PTC3P34221 468 aaKnown RBP6.94□□□□□ -1.3
SRB6YBR253W VHR2P40041 505 aa6.94□□□□□ -1.3
SRB6YBR253W RPL34BP40525 121 aaKnown RBP6.94□□□□□ -1.3
SRB6YBR253W YDR090CQ03193 310 aa6.94□□□□□ -1.3
SRB6YBR253W TIF1P10081 395 aaKnown RBP6.93□□□□□ -1.3
SRB6YBR253W SLD2P34252 453 aa6.93□□□□□ -1.3
SRB6YBR253W UBP14P38237 781 aaKnown RBP6.93□□□□□ -1.3
SRB6YBR253W YFR006WP43590 535 aa6.93□□□□□ -1.3
SRB6YBR253W SNU71P53207 620 aaKnown RBP6.92□□□□□ -1.3
SRB6YBR253W DBP1P24784 617 aaKnown RBP6.9□□□□□ -1.3
SRB6YBR253W RPL34AP87262 121 aaPredicted RBP6.9□□□□□ -1.3
SRB6YBR253W KTR1P27810 393 aaKnown RBP6.89□□□□□ -1.31
SRB6YBR253W YPR204WQ08995 1032 aa6.89□□□□□ -1.31
SRB6YBR253W PSE1P32337 1089 aaKnown RBP6.88□□□□□ -1.31
SRB6YBR253W BIO2P32451 375 aa6.88□□□□□ -1.31
SRB6YBR253W CDC3P32457 520 aaKnown RBP6.88□□□□□ -1.31
SRB6YBR253W TTI1P36097 1038 aa6.88□□□□□ -1.31
SRB6YBR253W NOB1Q08444 459 aaKnown RBP6.88□□□□□ -1.31
SRB6YBR253W SSF1P38789 453 aaPredicted RBP6.87□□□□□ -1.31
SRB6YBR253W YLR326WQ06170 240 aaKnown RBP6.87□□□□□ -1.31
SRB6YBR253W PAM1P37304 830 aaKnown RBP6.86□□□□□ -1.31
SRB6YBR253W YBL036CP38197 257 aa6.86□□□□□ -1.31
SRB6YBR253W RRN6P32786 894 aa6.85□□□□□ -1.31
SRB6YBR253W KIC1P38692 1080 aa6.85□□□□□ -1.31
SRB6YBR253W SEN54Q02825 467 aaPredicted RBP6.85□□□□□ -1.31
SRB6YBR253W TYW1Q08960 810 aaKnown RBP6.85□□□□□ -1.31
SRB6YBR253W RTG2P32608 588 aaKnown RBP6.84□□□□□ -1.31
SRB6YBR253W MET10P39692 1035 aa6.84□□□□□ -1.31
SRB6YBR253W YML083CQ04526 418 aa6.82□□□□□ -1.32
SRB6YBR253W TEA1P47988 759 aa6.81□□□□□ -1.32
SRB6YBR253W HEM3P28789 327 aa6.8□□□□□ -1.32
SRB6YBR253W YNL108CP53929 270 aa6.8□□□□□ -1.32
SRB6YBR253W YOR238WQ08634 303 aa6.8□□□□□ -1.32
SRB6YBR253W RAD54P32863 898 aa6.79□□□□□ -1.32
SRB6YBR253W MAP2P38174 421 aaKnown RBP6.79□□□□□ -1.32
SRB6YBR253W HAT1Q12341 374 aa6.79□□□□□ -1.32
SRB6YBR253W PUP1P25043 261 aa6.78□□□□□ -1.32
SRB6YBR253W ORC6P38826 435 aa6.78□□□□□ -1.32
SRB6YBR253W PCS60P38137 543 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
SRB6YBR253W ATH1P48016 1211 aa6.77□□□□□ -1.33
SRB6YBR253W KEX1P09620 729 aa6.75□□□□□ -1.33
SRB6YBR253W YGR273CP53329 174 aa6.75□□□□□ -1.33
SRB6YBR253W RAD59Q12223 238 aa6.75□□□□□ -1.33
SRB6YBR253W YTA7P40340 1379 aa6.74□□□□□ -1.33
SRB6YBR253W YCK3P39962 524 aa6.74□□□□□ -1.33
SRB6YBR253W UBP10P53874 792 aaPredicted RBP6.74□□□□□ -1.33
SRB6YBR253W PKH3Q03306 898 aaPredicted RBP6.74□□□□□ -1.33
SRB6YBR253W GRE2Q12068 342 aaKnown RBP6.74□□□□□ -1.33
SRB6YBR253W ENO1P00924 437 aaKnown RBP6.73□□□□□ -1.33
SRB6YBR253W GUT1P32190 709 aa6.73□□□□□ -1.33
SRB6YBR253W SLX5P32828 619 aaKnown RBP6.73□□□□□ -1.33
SRB6YBR253W PIB1Q06651 286 aa6.73□□□□□ -1.33
SRB6YBR253W SUP45P12385 437 aaKnown RBP6.72□□□□□ -1.33
SRB6YBR253W VMA1P17255 1071 aaKnown RBP6.72□□□□□ -1.33
SRB6YBR253W CSE4P36012 229 aa6.72□□□□□ -1.33
SRB6YBR253W ENO2P00925 437 aaKnown RBP6.71□□□□□ -1.34
SRB6YBR253W ESS1P22696 170 aa6.71□□□□□ -1.34
SRB6YBR253W HST2P53686 357 aa6.71□□□□□ -1.34
SRB6YBR253W NIS1P53939 407 aa6.71□□□□□ -1.34
SRB6YBR253W YMR196WQ04336 1088 aa6.71□□□□□ -1.34
SRB6YBR253W RGR1P19263 1082 aa6.7□□□□□ -1.34
SRB6YBR253W CLB5P30283 435 aa6.7□□□□□ -1.34
SRB6YBR253W SIS2P36024 562 aa6.7□□□□□ -1.34
SRB6YBR253W IPL1P38991 367 aa6.7□□□□□ -1.34
SRB6YBR253W FPK1P53739 893 aa6.7□□□□□ -1.34
SRB6YBR253W ITT1Q04638 464 aa6.69□□□□□ -1.34
SRB6YBR253W MRX10Q05648 414 aa6.69□□□□□ -1.34
SRB6YBR253W MMP1Q12372 583 aa6.69□□□□□ -1.34
SRB6YBR253W SCJ1P25303 377 aa6.68□□□□□ -1.34
SRB6YBR253W YDJ1P25491 409 aaKnown RBP6.68□□□□□ -1.34
SRB6YBR253W TGL4P36165 910 aa6.68□□□□□ -1.34
SRB6YBR253W SOL3P38858 249 aa6.68□□□□□ -1.34
SRB6YBR253W YJU3P28321 313 aa6.67□□□□□ -1.34
SRB6YBR253W ASF1P32447 279 aa6.67□□□□□ -1.34
SRB6YBR253W STM1P39015 273 aaKnown RBP6.67□□□□□ -1.34
SRB6YBR253W SGS1P35187 1447 aa6.67□□□□□ -1.34
SRB6YBR253W BRN1P38170 754 aa6.66□□□□□ -1.34
SRB6YBR253W OCA5P38738 679 aa6.66□□□□□ -1.34
SRB6YBR253W MVP1P40959 511 aaKnown RBP6.66□□□□□ -1.34
SRB6YBR253W ALD2P47771 506 aa6.66□□□□□ -1.34
SRB6YBR253W RIM21P48565 533 aa6.66□□□□□ -1.34
SRB6YBR253W YBL113CQ7M4S9 792 aa6.66□□□□□ -1.34
SRB6YBR253W ARG8P18544 423 aa6.65□□□□□ -1.34
SRB6YBR253W HAA1Q12753 694 aaKnown RBP6.65□□□□□ -1.34
SRB6YBR253W SPT5P27692 1063 aaKnown RBP6.64□□□□□ -1.35
SRB6YBR253W SEC20P28791 383 aa6.64□□□□□ -1.35
SRB6YBR253W ERP5P38819 212 aa6.62□□□□□ -1.35
SRB6YBR253W MAK16P10962 306 aaPredicted RBP6.61□□□□□ -1.35
SRB6YBR253W RRP15Q06511 250 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms