RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 DAXXQ9UER7 740 aaPredicted RBP13.83□□□□□ -0.2
SMN2-214ENST00000626847 ERCC6Q03468 1493 aa13.83□□□□□ -0.2
SMN2-214ENST00000626847 C19orf67A6NJJ6 358 aa13.81□□□□□ -0.2
SMN2-214ENST00000626847 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
SMN2-214ENST00000626847 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
SMN2-214ENST00000626847 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
SMN2-214ENST00000626847 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
SMN2-214ENST00000626847 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
SMN2-214ENST00000626847 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
SMN2-214ENST00000626847 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.22
SMN2-214ENST00000626847 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
SMN2-214ENST00000626847 PLCB2Q00722 1185 aa13.67□□□□□ -0.22
SMN2-214ENST00000626847 PKD2Q13563 968 aa13.66□□□□□ -0.22
SMN2-214ENST00000626847 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
SMN2-214ENST00000626847 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
SMN2-214ENST00000626847 ILDR1Q86SU0 546 aaPredicted RBP13.65□□□□□ -0.22
SMN2-214ENST00000626847 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
SMN2-214ENST00000626847 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
SMN2-214ENST00000626847 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
SMN2-214ENST00000626847 MIER1Q8N108 512 aa13.59□□□□□ -0.23
SMN2-214ENST00000626847 OTUD5Q96G74 571 aa13.57□□□□□ -0.24
SMN2-214ENST00000626847 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
SMN2-214ENST00000626847 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
SMN2-214ENST00000626847 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
SMN2-214ENST00000626847 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
SMN2-214ENST00000626847 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
SMN2-214ENST00000626847 NESP48681 1621 aa13.51□□□□□ -0.25
SMN2-214ENST00000626847 NCAPD3P42695 1498 aa13.46□□□□□ -0.26
SMN2-214ENST00000626847 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
SMN2-214ENST00000626847 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
SMN2-214ENST00000626847 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
SMN2-214ENST00000626847 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
SMN2-214ENST00000626847 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
SMN2-214ENST00000626847 CLCN6P51797 869 aa13.36□□□□□ -0.27
SMN2-214ENST00000626847 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
SMN2-214ENST00000626847 RGL2O15211 777 aa13.34□□□□□ -0.27
SMN2-214ENST00000626847 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
SMN2-214ENST00000626847 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
SMN2-214ENST00000626847 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMN2-214ENST00000626847 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
SMN2-214ENST00000626847 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
SMN2-214ENST00000626847 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
SMN2-214ENST00000626847 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
SMN2-214ENST00000626847 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
SMN2-214ENST00000626847 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
SMN2-214ENST00000626847 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
SMN2-214ENST00000626847 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
SMN2-214ENST00000626847 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
SMN2-214ENST00000626847 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
SMN2-214ENST00000626847 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.29
SMN2-214ENST00000626847 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.3
SMN2-214ENST00000626847 BCANQ96GW7 911 aa13.21□□□□□ -0.3
SMN2-214ENST00000626847 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
SMN2-214ENST00000626847 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
SMN2-214ENST00000626847 GSE1Q14687 1217 aa13.18□□□□□ -0.3
SMN2-214ENST00000626847 HRCP23327 699 aa13.17□□□□□ -0.3
SMN2-214ENST00000626847 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
SMN2-214ENST00000626847 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
SMN2-214ENST00000626847 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
SMN2-214ENST00000626847 WDR62O43379 1518 aa13.14□□□□□ -0.31
SMN2-214ENST00000626847 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
SMN2-214ENST00000626847 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
SMN2-214ENST00000626847 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
SMN2-214ENST00000626847 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
SMN2-214ENST00000626847 EIF5BO60841 1220 aaKnown RBP13.11□□□□□ -0.31
SMN2-214ENST00000626847 ARHGEF11O15085 1522 aa13.11□□□□□ -0.31
SMN2-214ENST00000626847 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
SMN2-214ENST00000626847 NUBP1P53384 320 aa13.07□□□□□ -0.32
SMN2-214ENST00000626847 LCE2DQ5TA82 110 aaPredicted RBP13.07□□□□□ -0.32
SMN2-214ENST00000626847 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
SMN2-214ENST00000626847 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
SMN2-214ENST00000626847 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
SMN2-214ENST00000626847 CDAN1Q8IWY9 1227 aa13.05□□□□□ -0.32
SMN2-214ENST00000626847 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
SMN2-214ENST00000626847 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
SMN2-214ENST00000626847 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
SMN2-214ENST00000626847 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
SMN2-214ENST00000626847 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
SMN2-214ENST00000626847 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
SMN2-214ENST00000626847 CADPSQ9ULU8 1353 aa13□□□□□ -0.33
SMN2-214ENST00000626847 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
SMN2-214ENST00000626847 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
SMN2-214ENST00000626847 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
SMN2-214ENST00000626847 FAM9AQ8IZU1 332 aaPredicted RBP12.96□□□□□ -0.33
SMN2-214ENST00000626847 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
SMN2-214ENST00000626847 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
SMN2-214ENST00000626847 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
SMN2-214ENST00000626847 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
SMN2-214ENST00000626847 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
SMN2-214ENST00000626847 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
SMN2-214ENST00000626847 STK25O00506 426 aa12.9□□□□□ -0.34
SMN2-214ENST00000626847 VGFO15240 615 aaPredicted RBP12.89□□□□□ -0.35
SMN2-214ENST00000626847 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
SMN2-214ENST00000626847 CHRM1P11229 460 aaPredicted RBP12.86□□□□□ -0.35
SMN2-214ENST00000626847 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
SMN2-214ENST00000626847 SOCS7O14512 581 aa12.84□□□□□ -0.35
SMN2-214ENST00000626847 PYGBP11216 843 aa12.82□□□□□ -0.36
SMN2-214ENST00000626847 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
SMN2-214ENST00000626847 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
SMN2-214ENST00000626847 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms