RNA–Protein interactions for RNA: ENST00000611739.4

EP400-207, Transcript of E1A binding protein p400, humanhuman

TSL 1 (best)

Gene EP400, Length 4,314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-207ENST00000611739 WIZO95785 1651 aa14.07□□□□□ -0.16
EP400-207ENST00000611739 SENP3-EIF4A1A0A087X0R7 540 aa14.07□□□□□ -0.16
EP400-207ENST00000611739 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
EP400-207ENST00000611739 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
EP400-207ENST00000611739 KDM2AQ9Y2K7 1162 aa14.04□□□□□ -0.16
EP400-207ENST00000611739 BCL11AQ9H165 835 aa14.03□□□□□ -0.16
EP400-207ENST00000611739 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.16
EP400-207ENST00000611739 NBR1Q14596 966 aa14□□□□□ -0.17
EP400-207ENST00000611739 RUSC2Q8N2Y8 1516 aa14□□□□□ -0.17
EP400-207ENST00000611739 CANXP27824 592 aaKnown RBP14□□□□□ -0.17
EP400-207ENST00000611739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.17
EP400-207ENST00000611739 TSPY4P0CV99 314 aa13.94□□□□□ -0.18
EP400-207ENST00000611739 TSPY10P0CW01 314 aa13.94□□□□□ -0.18
EP400-207ENST00000611739 CARMIL1Q5VZK9 1371 aa13.94□□□□□ -0.18
EP400-207ENST00000611739 CUX2O14529 1486 aa13.92□□□□□ -0.18
EP400-207ENST00000611739 ZBTB47Q9UFB7 747 aaPredicted RBP13.91□□□□□ -0.18
EP400-207ENST00000611739 TOP2AP11388 1531 aaKnown RBP13.91□□□□□ -0.18
EP400-207ENST00000611739 RAB3GAP2Q9H2M9 1393 aa13.91□□□□□ -0.18
EP400-207ENST00000611739 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
EP400-207ENST00000611739 SETD5Q9C0A6 1442 aa13.89□□□□□ -0.19
EP400-207ENST00000611739 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
EP400-207ENST00000611739 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
EP400-207ENST00000611739 RGL3Q3MIN7 710 aa13.86□□□□□ -0.19
EP400-207ENST00000611739 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
EP400-207ENST00000611739 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
EP400-207ENST00000611739 TIMELESSQ9UNS1 1208 aa13.85□□□□□ -0.19
EP400-207ENST00000611739 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
EP400-207ENST00000611739 CFDP1Q9UEE9 299 aaPredicted RBP13.84□□□□□ -0.19
EP400-207ENST00000611739 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
EP400-207ENST00000611739 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
EP400-207ENST00000611739 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
EP400-207ENST00000611739 PPP4R2Q9NY27 417 aa13.82□□□□□ -0.2
EP400-207ENST00000611739 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
EP400-207ENST00000611739 GLIPR1L2Q4G1C9 344 aa13.81□□□□□ -0.2
EP400-207ENST00000611739 WDR43Q15061 677 aaKnown RBP eCLIP13.81□□□□□ -0.2
EP400-207ENST00000611739 FOXD1Q16676 465 aa13.81□□□□□ -0.2
EP400-207ENST00000611739 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
EP400-207ENST00000611739 HSPA5P11021 654 aaKnown RBP13.8□□□□□ -0.2
EP400-207ENST00000611739 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
EP400-207ENST00000611739 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
EP400-207ENST00000611739 NEFMP07197 916 aa13.76□□□□□ -0.21
EP400-207ENST00000611739 ARHGAP35Q9NRY4 1499 aa13.75□□□□□ -0.21
EP400-207ENST00000611739 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
EP400-207ENST00000611739 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.74□□□□□ -0.21
EP400-207ENST00000611739 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
EP400-207ENST00000611739 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
EP400-207ENST00000611739 UPF2Q9HAU5 1272 aaKnown RBP13.7□□□□□ -0.22
EP400-207ENST00000611739 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
EP400-207ENST00000611739 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
EP400-207ENST00000611739 SLC24A1O60721 1099 aa13.69□□□□□ -0.22
EP400-207ENST00000611739 ARXQ96QS3 562 aa13.69□□□□□ -0.22
EP400-207ENST00000611739 SENP3Q9H4L4 574 aaPredicted RBP13.68□□□□□ -0.22
EP400-207ENST00000611739 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
EP400-207ENST00000611739 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
EP400-207ENST00000611739 DCAF11Q8TEB1 546 aa13.67□□□□□ -0.22
EP400-207ENST00000611739 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
EP400-207ENST00000611739 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
EP400-207ENST00000611739 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
EP400-207ENST00000611739 NOP58Q9Y2X3 529 aaKnown RBP13.66□□□□□ -0.22
EP400-207ENST00000611739 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
EP400-207ENST00000611739 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
EP400-207ENST00000611739 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
EP400-207ENST00000611739 PKD2Q13563 968 aa13.64□□□□□ -0.23
EP400-207ENST00000611739 FMN1Q68DA7 1419 aa13.62□□□□□ -0.23
EP400-207ENST00000611739 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
EP400-207ENST00000611739 NEUROD2Q15784 382 aa13.6□□□□□ -0.23
EP400-207ENST00000611739 RGS3P49796 1198 aa13.6□□□□□ -0.23
EP400-207ENST00000611739 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
EP400-207ENST00000611739 KIF21BO75037 1637 aa13.58□□□□□ -0.24
EP400-207ENST00000611739 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
EP400-207ENST00000611739 DDRGK1Q96HY6 314 aa13.58□□□□□ -0.24
EP400-207ENST00000611739 IGF1RP08069 1367 aa13.54□□□□□ -0.24
EP400-207ENST00000611739 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
EP400-207ENST00000611739 TNNT2P45379 298 aaPredicted RBP13.54□□□□□ -0.24
EP400-207ENST00000611739 ERICH6BQ5W0A0 696 aa13.54□□□□□ -0.24
EP400-207ENST00000611739 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
EP400-207ENST00000611739 PHLDB1Q86UU1 1377 aa13.52□□□□□ -0.25
EP400-207ENST00000611739 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.25
EP400-207ENST00000611739 FRAT1Q92837 279 aaPredicted RBP13.51□□□□□ -0.25
EP400-207ENST00000611739 NUP155O75694 1391 aa13.51□□□□□ -0.25
EP400-207ENST00000611739 TMF1P82094 1093 aa13.51□□□□□ -0.25
EP400-207ENST00000611739 PRKRIP1Q9H875 184 aaPredicted RBP13.51□□□□□ -0.25
EP400-207ENST00000611739 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
EP400-207ENST00000611739 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
EP400-207ENST00000611739 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
EP400-207ENST00000611739 BECN1Q14457 450 aa13.48□□□□□ -0.25
EP400-207ENST00000611739 ANP32BQ92688 251 aaKnown RBP13.48□□□□□ -0.25
EP400-207ENST00000611739 ESF1Q9H501 851 aaKnown RBP13.48□□□□□ -0.25
EP400-207ENST00000611739 CCDC18Q5T9S5 1454 aa13.47□□□□□ -0.25
EP400-207ENST00000611739 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
EP400-207ENST00000611739 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
EP400-207ENST00000611739 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
EP400-207ENST00000611739 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
EP400-207ENST00000611739 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
EP400-207ENST00000611739 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
EP400-207ENST00000611739 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
EP400-207ENST00000611739 RALBP1Q15311 655 aa13.43□□□□□ -0.26
EP400-207ENST00000611739 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
EP400-207ENST00000611739 HNRNPMP52272 730 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■■■□ 22
EP400-207ENST00000611739 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms