RNA–Protein interactions for RNA: ENST00000577426.1

TRAPPC8-202, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-202ENST00000577426 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
TRAPPC8-202ENST00000577426 PEG3Q9GZU2 1588 aa9.79□□□□□ -0.84
TRAPPC8-202ENST00000577426 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
TRAPPC8-202ENST00000577426 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
TRAPPC8-202ENST00000577426 BAZ1BQ9UIG0 1483 aaKnown RBP9.73□□□□□ -0.85
TRAPPC8-202ENST00000577426 MROH2BQ7Z745 1585 aa9.73□□□□□ -0.85
TRAPPC8-202ENST00000577426 IFNLR1Q8IU57 520 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC8-202ENST00000577426 CHRDL2Q6WN34 429 aa9.71□□□□□ -0.86
TRAPPC8-202ENST00000577426 NESP48681 1621 aa9.69□□□□□ -0.86
TRAPPC8-202ENST00000577426 ZBTB47Q9UFB7 747 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC8-202ENST00000577426 LAMC3Q9Y6N6 1575 aa9.67□□□□□ -0.86
TRAPPC8-202ENST00000577426 CREBZFQ9NS37 354 aa9.67□□□□□ -0.86
TRAPPC8-202ENST00000577426 RIMBP3CA6NJZ7 1639 aa9.67□□□□□ -0.86
TRAPPC8-202ENST00000577426 RIMBP3BA6NNM3 1639 aa9.67□□□□□ -0.86
TRAPPC8-202ENST00000577426 RIMBP3Q9UFD9 1639 aa9.67□□□□□ -0.86
TRAPPC8-202ENST00000577426 WIZO95785 1651 aa9.64□□□□□ -0.87
TRAPPC8-202ENST00000577426 THOC2Q8NI27 1593 aaKnown RBP9.64□□□□□ -0.87
TRAPPC8-202ENST00000577426 FXR2P51116 673 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAPPC8-202ENST00000577426 SOCS7O14512 581 aa9.63□□□□□ -0.87
TRAPPC8-202ENST00000577426 CHADLQ6NUI6 762 aa9.63□□□□□ -0.87
TRAPPC8-202ENST00000577426 KIF21AQ7Z4S6 1674 aa9.63□□□□□ -0.87
TRAPPC8-202ENST00000577426 PRKAR2AP13861 404 aaKnown RBP9.62□□□□□ -0.87
TRAPPC8-202ENST00000577426 SPOCK2Q92563 424 aa9.62□□□□□ -0.87
TRAPPC8-202ENST00000577426 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC8-202ENST00000577426 LMTK3Q96Q04 1460 aa9.6□□□□□ -0.87
TRAPPC8-202ENST00000577426 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
TRAPPC8-202ENST00000577426 ARHGEF11O15085 1522 aa9.58□□□□□ -0.88
TRAPPC8-202ENST00000577426 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRAPPC8-202ENST00000577426 MNX1P50219 401 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC8-202ENST00000577426 PDS5BQ9NTI5 1447 aa9.56□□□□□ -0.88
TRAPPC8-202ENST00000577426 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
TRAPPC8-202ENST00000577426 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
TRAPPC8-202ENST00000577426 FARP1Q9Y4F1 1045 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC8-202ENST00000577426 CADPSQ9ULU8 1353 aa9.54□□□□□ -0.88
TRAPPC8-202ENST00000577426 RSF1Q96T23 1441 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC8-202ENST00000577426 TOP2AP11388 1531 aaKnown RBP9.51□□□□□ -0.89
TRAPPC8-202ENST00000577426 ILDR2Q71H61 639 aa9.51□□□□□ -0.89
TRAPPC8-202ENST00000577426 WDR62O43379 1518 aa9.5□□□□□ -0.89
TRAPPC8-202ENST00000577426 MRC2Q9UBG0 1479 aa9.49□□□□□ -0.89
TRAPPC8-202ENST00000577426 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
TRAPPC8-202ENST00000577426 NUBP1P53384 320 aa9.49□□□□□ -0.89
TRAPPC8-202ENST00000577426 CIZ1Q9ULV3 898 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC8-202ENST00000577426 DCAF8Q5TAQ9 597 aa9.48□□□□□ -0.89
TRAPPC8-202ENST00000577426 CFTRP13569 1480 aa9.47□□□□□ -0.89
TRAPPC8-202ENST00000577426 CEP164Q9UPV0 1460 aa9.47□□□□□ -0.89
TRAPPC8-202ENST00000577426 KDM4FA0A1W2PPD8 638 aa9.46□□□□□ -0.9
TRAPPC8-202ENST00000577426 GSE1Q14687 1217 aa9.45□□□□□ -0.9
TRAPPC8-202ENST00000577426 FANCD2Q9BXW9 1451 aa9.45□□□□□ -0.9
TRAPPC8-202ENST00000577426 RASEFQ8IZ41 740 aa9.44□□□□□ -0.9
TRAPPC8-202ENST00000577426 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
TRAPPC8-202ENST00000577426 ARAP1Q96P48 1450 aa9.43□□□□□ -0.9
TRAPPC8-202ENST00000577426 PKD2Q13563 968 aa9.43□□□□□ -0.9
TRAPPC8-202ENST00000577426 TSPYL2Q9H2G4 693 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC8-202ENST00000577426 DISP3Q9P2K9 1392 aa9.39□□□□□ -0.91
TRAPPC8-202ENST00000577426 PAK3O75914 559 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC8-202ENST00000577426 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC8-202ENST00000577426 URB2Q14146 1524 aaKnown RBP9.38□□□□□ -0.91
TRAPPC8-202ENST00000577426 CCDC88BA6NC98 1476 aa9.38□□□□□ -0.91
TRAPPC8-202ENST00000577426 CD44P16070 742 aaKnown RBP9.34□□□□□ -0.91
TRAPPC8-202ENST00000577426 HAX1O00165 279 aa9.32□□□□□ -0.92
TRAPPC8-202ENST00000577426 POTEHQ6S545 545 aa9.32□□□□□ -0.92
TRAPPC8-202ENST00000577426 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
TRAPPC8-202ENST00000577426 C19orf67A6NJJ6 358 aa9.31□□□□□ -0.92
TRAPPC8-202ENST00000577426 PYGBP11216 843 aa9.3□□□□□ -0.92
TRAPPC8-202ENST00000577426 CHRM1P11229 460 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC8-202ENST00000577426 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
TRAPPC8-202ENST00000577426 TOPBP1Q92547 1522 aa9.29□□□□□ -0.92
TRAPPC8-202ENST00000577426 ABCC8Q09428 1581 aa9.28□□□□□ -0.92
TRAPPC8-202ENST00000577426 ERCC6L2Q5T890 1561 aa9.28□□□□□ -0.92
TRAPPC8-202ENST00000577426 RGL2O15211 777 aa9.27□□□□□ -0.93
TRAPPC8-202ENST00000577426 DNMBPQ6XZF7 1577 aa9.27□□□□□ -0.93
TRAPPC8-202ENST00000577426 IFT140Q96RY7 1462 aa9.27□□□□□ -0.93
TRAPPC8-202ENST00000577426 ZNF608Q9ULD9 1512 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC8-202ENST00000577426 EIF4G3O43432 1585 aaKnown RBP9.24□□□□□ -0.93
TRAPPC8-202ENST00000577426 TARBP1Q13395 1621 aaKnown RBP9.23□□□□□ -0.93
TRAPPC8-202ENST00000577426 KIF12Q96FN5 646 aa9.21□□□□□ -0.94
TRAPPC8-202ENST00000577426 RIOK3O14730 519 aaKnown RBP9.2□□□□□ -0.94
TRAPPC8-202ENST00000577426 EVX2Q03828 476 aa9.2□□□□□ -0.94
TRAPPC8-202ENST00000577426 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
TRAPPC8-202ENST00000577426 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
TRAPPC8-202ENST00000577426 SYNJ2O15056 1496 aa9.2□□□□□ -0.94
TRAPPC8-202ENST00000577426 CHD1O14646 1710 aa9.19□□□□□ -0.94
TRAPPC8-202ENST00000577426 MAP3K13O43283 966 aa9.19□□□□□ -0.94
TRAPPC8-202ENST00000577426 ZNF579Q8NAF0 562 aaKnown RBP9.19□□□□□ -0.94
TRAPPC8-202ENST00000577426 PCDHB13Q9Y5F0 798 aa9.19□□□□□ -0.94
TRAPPC8-202ENST00000577426 POLA1P09884 1462 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC8-202ENST00000577426 HECW2Q9P2P5 1572 aa9.19□□□□□ -0.94
TRAPPC8-202ENST00000577426 ZNF467Q7Z7K2 595 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC8-202ENST00000577426 RNF25Q96BH1 459 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC8-202ENST00000577426 SGIP1Q9BQI5 828 aa9.18□□□□□ -0.94
TRAPPC8-202ENST00000577426 WDR97A6NE52 1622 aa9.16□□□□□ -0.94
TRAPPC8-202ENST00000577426 PCDHB8Q9UN66 801 aa9.16□□□□□ -0.94
TRAPPC8-202ENST00000577426 AQRO60306 1485 aaKnown RBP eCLIP9.15□□□□□ -0.94
TRAPPC8-202ENST00000577426 VGFO15240 615 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC8-202ENST00000577426 CUX1P39880 1505 aa9.15□□□□□ -0.95
TRAPPC8-202ENST00000577426 FGD5Q6ZNL6 1462 aa9.14□□□□□ -0.95
TRAPPC8-202ENST00000577426 RAD54L2Q9Y4B4 1467 aa9.14□□□□□ -0.95
TRAPPC8-202ENST00000577426 CHGAP10645 457 aaKnown RBP9.13□□□□□ -0.95
TRAPPC8-202ENST00000577426 CLCN6P51797 869 aa9.13□□□□□ -0.95
TRAPPC8-202ENST00000577426 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms