RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 PLCD3Q8N3E9 789 aa15.94■□□□□ 0.14
SCG3-203ENST00000558709 ERCC6Q03468 1493 aa15.93■□□□□ 0.14
SCG3-203ENST00000558709 HAX1O00165 279 aa15.91■□□□□ 0.14
SCG3-203ENST00000558709 PLEKHG5O94827 1062 aa15.89■□□□□ 0.13
SCG3-203ENST00000558709 EVX2Q03828 476 aa15.89■□□□□ 0.13
SCG3-203ENST00000558709 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
SCG3-203ENST00000558709 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
SCG3-203ENST00000558709 CD44P16070 742 aaKnown RBP15.8■□□□□ 0.12
SCG3-203ENST00000558709 IFNLR1Q8IU57 520 aaPredicted RBP15.79■□□□□ 0.12
SCG3-203ENST00000558709 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
SCG3-203ENST00000558709 NUBP1P53384 320 aa15.75■□□□□ 0.11
SCG3-203ENST00000558709 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
SCG3-203ENST00000558709 NESP48681 1621 aa15.74■□□□□ 0.11
SCG3-203ENST00000558709 SP7Q8TDD2 431 aaPredicted RBP15.73■□□□□ 0.11
SCG3-203ENST00000558709 HMGXB3Q12766 1538 aa15.72■□□□□ 0.11
SCG3-203ENST00000558709 RASEFQ8IZ41 740 aa15.71■□□□□ 0.11
SCG3-203ENST00000558709 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
SCG3-203ENST00000558709 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
SCG3-203ENST00000558709 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
SCG3-203ENST00000558709 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
SCG3-203ENST00000558709 ZRANB1Q9UGI0 708 aa15.67■□□□□ 0.1
SCG3-203ENST00000558709 ZNF579Q8NAF0 562 aaKnown RBP15.66■□□□□ 0.1
SCG3-203ENST00000558709 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
SCG3-203ENST00000558709 PAK3O75914 559 aaPredicted RBP15.61■□□□□ 0.09
SCG3-203ENST00000558709 CCDC61Q9Y6R9 512 aa15.6■□□□□ 0.09
SCG3-203ENST00000558709 SPOCK2Q92563 424 aa15.59■□□□□ 0.09
SCG3-203ENST00000558709 TSPYL2Q9H2G4 693 aaPredicted RBP15.59■□□□□ 0.09
SCG3-203ENST00000558709 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.09
SCG3-203ENST00000558709 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
SCG3-203ENST00000558709 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
SCG3-203ENST00000558709 PHF12Q96QT6 1004 aa15.54■□□□□ 0.08
SCG3-203ENST00000558709 GABBR2O75899 941 aa15.53■□□□□ 0.08
SCG3-203ENST00000558709 FAM212AQ96EL1 285 aa15.53■□□□□ 0.08
SCG3-203ENST00000558709 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
SCG3-203ENST00000558709 CLCN6P51797 869 aa15.5■□□□□ 0.07
SCG3-203ENST00000558709 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
SCG3-203ENST00000558709 KIF12Q96FN5 646 aa15.45■□□□□ 0.06
SCG3-203ENST00000558709 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
SCG3-203ENST00000558709 GSE1Q14687 1217 aa15.43■□□□□ 0.06
SCG3-203ENST00000558709 PDS5BQ9NTI5 1447 aa15.41■□□□□ 0.06
SCG3-203ENST00000558709 GALR2O43603 387 aaPredicted RBP15.39■□□□□ 0.05
SCG3-203ENST00000558709 MS4A3Q96HJ5 214 aa15.37■□□□□ 0.05
SCG3-203ENST00000558709 WDR62O43379 1518 aa15.37■□□□□ 0.05
SCG3-203ENST00000558709 MAP3K13O43283 966 aa15.36■□□□□ 0.05
SCG3-203ENST00000558709 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
SCG3-203ENST00000558709 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
SCG3-203ENST00000558709 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.04
SCG3-203ENST00000558709 CHRM1P11229 460 aaPredicted RBP15.32■□□□□ 0.04
SCG3-203ENST00000558709 PYGBP11216 843 aa15.31■□□□□ 0.04
SCG3-203ENST00000558709 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
SCG3-203ENST00000558709 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
SCG3-203ENST00000558709 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
SCG3-203ENST00000558709 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
SCG3-203ENST00000558709 IFNL1Q8IU54 200 aa15.23■□□□□ 0.03
SCG3-203ENST00000558709 TRPC6Q9Y210 931 aa15.23■□□□□ 0.03
SCG3-203ENST00000558709 WIZO95785 1651 aa15.22■□□□□ 0.03
SCG3-203ENST00000558709 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
SCG3-203ENST00000558709 PKD2Q13563 968 aa15.19■□□□□ 0.02
SCG3-203ENST00000558709 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
SCG3-203ENST00000558709 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
SCG3-203ENST00000558709 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
SCG3-203ENST00000558709 ASTLQ6HA08 431 aaPredicted RBP15.16■□□□□ 0.02
SCG3-203ENST00000558709 FANCD2Q9BXW9 1451 aa15.15■□□□□ 0.02
SCG3-203ENST00000558709 DCBLD2Q96PD2 775 aa15.15■□□□□ 0.02
SCG3-203ENST00000558709 PCDHB8Q9UN66 801 aa15.15■□□□□ 0.02
SCG3-203ENST00000558709 PRDM2Q13029 1718 aa15.14■□□□□ 0.01
SCG3-203ENST00000558709 TIE1P35590 1138 aa15.14■□□□□ 0.01
SCG3-203ENST00000558709 ZNF467Q7Z7K2 595 aaPredicted RBP15.13■□□□□ 0.01
SCG3-203ENST00000558709 BMP2KQ9NSY1 1161 aaPredicted RBP15.13■□□□□ 0.01
SCG3-203ENST00000558709 ATMINO43313 823 aaPredicted RBP15.12■□□□□ 0.01
SCG3-203ENST00000558709 RNF25Q96BH1 459 aaPredicted RBP15.1■□□□□ 0.01
SCG3-203ENST00000558709 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
SCG3-203ENST00000558709 TTLL13PA6NNM8 815 aa15.07■□□□□ 0
SCG3-203ENST00000558709 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
SCG3-203ENST00000558709 ATN1P54259 1190 aaPredicted RBP15.06■□□□□ 0
SCG3-203ENST00000558709 CFTRP13569 1480 aa15.04■□□□□ -0
SCG3-203ENST00000558709 ARHGEF11O15085 1522 aa15.03■□□□□ -0
SCG3-203ENST00000558709 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
SCG3-203ENST00000558709 TMEM106CQ9BVX2 250 aa15□□□□□ -0.01
SCG3-203ENST00000558709 RIOK3O14730 519 aaKnown RBP14.99□□□□□ -0.01
SCG3-203ENST00000558709 PDAP1Q13442 181 aaKnown RBP14.99□□□□□ -0.01
SCG3-203ENST00000558709 CHD1O14646 1710 aa14.98□□□□□ -0.01
SCG3-203ENST00000558709 PSEN1P49768 467 aa14.98□□□□□ -0.01
SCG3-203ENST00000558709 RGL2O15211 777 aa14.96□□□□□ -0.01
SCG3-203ENST00000558709 ZNF608Q9ULD9 1512 aaPredicted RBP14.95□□□□□ -0.02
SCG3-203ENST00000558709 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
SCG3-203ENST00000558709 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
SCG3-203ENST00000558709 EIF4G3O43432 1585 aaKnown RBP14.94□□□□□ -0.02
SCG3-203ENST00000558709 SLC39A7Q92504 469 aa14.91□□□□□ -0.02
SCG3-203ENST00000558709 VGFO15240 615 aaPredicted RBP14.9□□□□□ -0.02
SCG3-203ENST00000558709 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
SCG3-203ENST00000558709 C7P10643 843 aa14.88□□□□□ -0.03
SCG3-203ENST00000558709 METRNQ9UJH8 293 aa14.88□□□□□ -0.03
SCG3-203ENST00000558709 IER5LQ5T953 404 aa14.87□□□□□ -0.03
SCG3-203ENST00000558709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.86□□□□□ -0.03
SCG3-203ENST00000558709 ZFP91Q96JP5 570 aaPredicted RBP14.86□□□□□ -0.03
SCG3-203ENST00000558709 ARAP1Q96P48 1450 aa14.85□□□□□ -0.03
SCG3-203ENST00000558709 POTEFA5A3E0 1075 aa14.85□□□□□ -0.03
SCG3-203ENST00000558709 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
SCG3-203ENST00000558709 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms