RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 PKD2Q13563 968 aa13.85□□□□□ -0.19
SUPT16H-204ENST00000555943 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
SUPT16H-204ENST00000555943 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
SUPT16H-204ENST00000555943 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
SUPT16H-204ENST00000555943 CUX2O14529 1486 aa13.82□□□□□ -0.2
SUPT16H-204ENST00000555943 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
SUPT16H-204ENST00000555943 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
SUPT16H-204ENST00000555943 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
SUPT16H-204ENST00000555943 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
SUPT16H-204ENST00000555943 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
SUPT16H-204ENST00000555943 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
SUPT16H-204ENST00000555943 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
SUPT16H-204ENST00000555943 NUBP1P53384 320 aa13.66□□□□□ -0.22
SUPT16H-204ENST00000555943 MROH2BQ7Z745 1585 aa13.66□□□□□ -0.22
SUPT16H-204ENST00000555943 LAMC3Q9Y6N6 1575 aa13.63□□□□□ -0.23
SUPT16H-204ENST00000555943 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
SUPT16H-204ENST00000555943 NESP48681 1621 aa13.6□□□□□ -0.23
SUPT16H-204ENST00000555943 RGL2O15211 777 aa13.56□□□□□ -0.24
SUPT16H-204ENST00000555943 SLC24A1O60721 1099 aa13.56□□□□□ -0.24
SUPT16H-204ENST00000555943 GSE1Q14687 1217 aa13.56□□□□□ -0.24
SUPT16H-204ENST00000555943 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
SUPT16H-204ENST00000555943 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
SUPT16H-204ENST00000555943 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
SUPT16H-204ENST00000555943 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
SUPT16H-204ENST00000555943 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
SUPT16H-204ENST00000555943 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
SUPT16H-204ENST00000555943 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
SUPT16H-204ENST00000555943 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.255e-13■■■□□ 14.8
SUPT16H-204ENST00000555943 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
SUPT16H-204ENST00000555943 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
SUPT16H-204ENST00000555943 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
SUPT16H-204ENST00000555943 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
SUPT16H-204ENST00000555943 WIZO95785 1651 aa13.5□□□□□ -0.25
SUPT16H-204ENST00000555943 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
SUPT16H-204ENST00000555943 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
SUPT16H-204ENST00000555943 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
SUPT16H-204ENST00000555943 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
SUPT16H-204ENST00000555943 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
SUPT16H-204ENST00000555943 MRC2Q9UBG0 1479 aa13.39□□□□□ -0.27
SUPT16H-204ENST00000555943 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
SUPT16H-204ENST00000555943 WDR62O43379 1518 aa13.37□□□□□ -0.27
SUPT16H-204ENST00000555943 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
SUPT16H-204ENST00000555943 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
SUPT16H-204ENST00000555943 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
SUPT16H-204ENST00000555943 CFTRP13569 1480 aa13.36□□□□□ -0.27
SUPT16H-204ENST00000555943 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
SUPT16H-204ENST00000555943 PYGBP11216 843 aa13.33□□□□□ -0.28
SUPT16H-204ENST00000555943 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
SUPT16H-204ENST00000555943 RIOK3O14730 519 aaKnown RBP13.32□□□□□ -0.28
SUPT16H-204ENST00000555943 BBXQ8WY36 941 aaPredicted RBP13.32□□□□□ -0.28
SUPT16H-204ENST00000555943 CHGAP10645 457 aaKnown RBP13.31□□□□□ -0.28
SUPT16H-204ENST00000555943 PRDM2Q13029 1718 aa13.28□□□□□ -0.28
SUPT16H-204ENST00000555943 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
SUPT16H-204ENST00000555943 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
SUPT16H-204ENST00000555943 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
SUPT16H-204ENST00000555943 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
SUPT16H-204ENST00000555943 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
SUPT16H-204ENST00000555943 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
SUPT16H-204ENST00000555943 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
SUPT16H-204ENST00000555943 PAXIP1Q6ZW49 1069 aaPredicted RBP13.19□□□□□ -0.3
SUPT16H-204ENST00000555943 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
SUPT16H-204ENST00000555943 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
SUPT16H-204ENST00000555943 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
SUPT16H-204ENST00000555943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
SUPT16H-204ENST00000555943 STK25O00506 426 aa13.15□□□□□ -0.3
SUPT16H-204ENST00000555943 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
SUPT16H-204ENST00000555943 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
SUPT16H-204ENST00000555943 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
SUPT16H-204ENST00000555943 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
SUPT16H-204ENST00000555943 POTEHQ6S545 545 aa13.13□□□□□ -0.31
SUPT16H-204ENST00000555943 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
SUPT16H-204ENST00000555943 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
SUPT16H-204ENST00000555943 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
SUPT16H-204ENST00000555943 PCDHB13Q9Y5F0 798 aa13.12□□□□□ -0.31
SUPT16H-204ENST00000555943 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
SUPT16H-204ENST00000555943 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
SUPT16H-204ENST00000555943 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
SUPT16H-204ENST00000555943 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
SUPT16H-204ENST00000555943 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
SUPT16H-204ENST00000555943 STK24Q9Y6E0 443 aa13.09□□□□□ -0.31
SUPT16H-204ENST00000555943 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-204ENST00000555943 MAP3K13O43283 966 aa13.07□□□□□ -0.32
SUPT16H-204ENST00000555943 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
SUPT16H-204ENST00000555943 PDAP1Q13442 181 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-204ENST00000555943 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
SUPT16H-204ENST00000555943 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
SUPT16H-204ENST00000555943 IFNL1Q8IU54 200 aa13.05□□□□□ -0.32
SUPT16H-204ENST00000555943 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
SUPT16H-204ENST00000555943 PSEN1P49768 467 aa13.01□□□□□ -0.33
SUPT16H-204ENST00000555943 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
SUPT16H-204ENST00000555943 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
SUPT16H-204ENST00000555943 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
SUPT16H-204ENST00000555943 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
SUPT16H-204ENST00000555943 RIMBP3CA6NJZ7 1639 aa12.96□□□□□ -0.33
SUPT16H-204ENST00000555943 RIMBP3BA6NNM3 1639 aa12.96□□□□□ -0.33
SUPT16H-204ENST00000555943 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-204ENST00000555943 RIMBP3Q9UFD9 1639 aa12.96□□□□□ -0.33
SUPT16H-204ENST00000555943 VSIG10Q8N0Z9 540 aa12.95□□□□□ -0.34
SUPT16H-204ENST00000555943 POLA1P09884 1462 aaPredicted RBP12.94□□□□□ -0.34
SUPT16H-204ENST00000555943 WDR97A6NE52 1622 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms