RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 ZFP91Q96JP5 570 aaPredicted RBP5.69□□□□□ -1.5
LRFN5-204ENST00000554171 NECTIN2Q92692 538 aa5.68□□□□□ -1.5
LRFN5-204ENST00000554171 IRX6P78412 446 aaPredicted RBP5.68□□□□□ -1.5
LRFN5-204ENST00000554171 CDK11BP21127 795 aaKnown RBP5.68□□□□□ -1.5
LRFN5-204ENST00000554171 MSH5O43196 834 aa5.67□□□□□ -1.5
LRFN5-204ENST00000554171 IPO4Q8TEX9 1081 aaKnown RBP5.67□□□□□ -1.5
LRFN5-204ENST00000554171 SECISBP2LQ93073 1101 aaKnown RBP5.67□□□□□ -1.5
LRFN5-204ENST00000554171 ZBTB22O15209 634 aa5.65□□□□□ -1.5
LRFN5-204ENST00000554171 FBLN2P98095 1184 aa5.65□□□□□ -1.5
LRFN5-204ENST00000554171 NAP1L2Q9ULW6 460 aaPredicted RBP5.65□□□□□ -1.5
LRFN5-204ENST00000554171 A0A0U1RQG5 324 aaPredicted RBP5.65□□□□□ -1.5
LRFN5-204ENST00000554171 SUPT5HO00267 1087 aaKnown RBP5.65□□□□□ -1.51
LRFN5-204ENST00000554171 MMP14P50281 582 aa5.64□□□□□ -1.51
LRFN5-204ENST00000554171 DEKP35659 375 aaKnown RBP5.64□□□□□ -1.51
LRFN5-204ENST00000554171 PRDM16Q9HAZ2 1276 aa5.64□□□□□ -1.51
LRFN5-204ENST00000554171 DCAF8L2P0C7V8 631 aa5.63□□□□□ -1.51
LRFN5-204ENST00000554171 CC2D2BQ6DHV5 1058 aa5.62□□□□□ -1.51
LRFN5-204ENST00000554171 PIAS4Q8N2W9 510 aaPredicted RBP5.62□□□□□ -1.51
LRFN5-204ENST00000554171 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.62□□□□□ -1.51
LRFN5-204ENST00000554171 STAC3Q96MF2 364 aa5.62□□□□□ -1.51
LRFN5-204ENST00000554171 RGS22Q8NE09 1264 aa5.61□□□□□ -1.51
LRFN5-204ENST00000554171 ARID3AQ99856 593 aa5.61□□□□□ -1.51
LRFN5-204ENST00000554171 ZNF326Q5BKZ1 582 aaKnown RBP5.61□□□□□ -1.51
LRFN5-204ENST00000554171 NAP1L5Q96NT1 182 aaPredicted RBP5.6□□□□□ -1.51
LRFN5-204ENST00000554171 CADPSQ9ULU8 1353 aa5.6□□□□□ -1.51
LRFN5-204ENST00000554171 VGFO15240 615 aaPredicted RBP5.6□□□□□ -1.51
LRFN5-204ENST00000554171 ZEB1P37275 1124 aaPredicted RBP5.6□□□□□ -1.51
LRFN5-204ENST00000554171 FAM43BQ6ZT52 329 aaPredicted RBP5.59□□□□□ -1.51
LRFN5-204ENST00000554171 TRHP20396 242 aaPredicted RBP5.59□□□□□ -1.51
LRFN5-204ENST00000554171 DNAJC5Q9H3Z4 198 aa5.59□□□□□ -1.52
LRFN5-204ENST00000554171 C1orf115Q9H7X2 142 aa5.58□□□□□ -1.52
LRFN5-204ENST00000554171 NPM1P06748 294 aaKnown RBP eCLIP5.58□□□□□ -1.52
LRFN5-204ENST00000554171 CNPY4Q8N129 248 aa5.57□□□□□ -1.52
LRFN5-204ENST00000554171 IGF1RP08069 1367 aa5.57□□□□□ -1.52
LRFN5-204ENST00000554171 C11orf95C9JLR9 678 aaPredicted RBP5.57□□□□□ -1.52
LRFN5-204ENST00000554171 SLC52A1Q9NWF4 448 aa5.57□□□□□ -1.52
LRFN5-204ENST00000554171 CLSPNQ9HAW4 1339 aa5.56□□□□□ -1.52
LRFN5-204ENST00000554171 CERS3Q8IU89 383 aa5.56□□□□□ -1.52
LRFN5-204ENST00000554171 CFAP44Q96MT7 982 aa5.56□□□□□ -1.52
LRFN5-204ENST00000554171 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.55□□□□□ -1.52
LRFN5-204ENST00000554171 ZNF592Q92610 1267 aa5.55□□□□□ -1.52
LRFN5-204ENST00000554171 CHMP4BQ9H444 224 aaKnown RBP5.55□□□□□ -1.52
LRFN5-204ENST00000554171 PSEN1P49768 467 aa5.55□□□□□ -1.52
LRFN5-204ENST00000554171 FTSJ3Q8IY81 847 aaKnown RBP5.54□□□□□ -1.52
LRFN5-204ENST00000554171 IL27Q8NEV9 243 aa5.53□□□□□ -1.52
LRFN5-204ENST00000554171 MYT1LQ9UL68 1186 aa5.53□□□□□ -1.52
LRFN5-204ENST00000554171 HMGB1P09429 215 aaKnown RBP5.53□□□□□ -1.52
LRFN5-204ENST00000554171 CCDC9Q9Y3X0 531 aaKnown RBP5.52□□□□□ -1.53
LRFN5-204ENST00000554171 MAFGO15525 162 aa5.52□□□□□ -1.53
LRFN5-204ENST00000554171 CLSTN1O94985 981 aa5.51□□□□□ -1.53
LRFN5-204ENST00000554171 PRDM10Q9NQV6 1147 aa5.51□□□□□ -1.53
LRFN5-204ENST00000554171 CENPJQ9HC77 1338 aaPredicted RBP5.51□□□□□ -1.53
LRFN5-204ENST00000554171 ZNF830Q96NB3 372 aaPredicted RBP5.5□□□□□ -1.53
LRFN5-204ENST00000554171 TMEM51Q9NW97 253 aa5.49□□□□□ -1.53
LRFN5-204ENST00000554171 SGSM3Q96HU1 749 aa5.49□□□□□ -1.53
LRFN5-204ENST00000554171 WASHC2CQ9Y4E1 1318 aa5.48□□□□□ -1.53
LRFN5-204ENST00000554171 MCCP23508 829 aa5.47□□□□□ -1.53
LRFN5-204ENST00000554171 FANCIQ9NVI1 1328 aa5.47□□□□□ -1.53
LRFN5-204ENST00000554171 ZNF428Q96B54 188 aa5.47□□□□□ -1.53
LRFN5-204ENST00000554171 NCLP19338 710 aaKnown RBP5.46□□□□□ -1.54
LRFN5-204ENST00000554171 BORCS6Q96GS4 357 aa5.46□□□□□ -1.54
LRFN5-204ENST00000554171 BBXQ8WY36 941 aaPredicted RBP5.45□□□□□ -1.54
LRFN5-204ENST00000554171 FAM177A1Q8N128 213 aaPredicted RBP5.44□□□□□ -1.54
LRFN5-204ENST00000554171 SUPT16HQ9Y5B9 1047 aaKnown RBP5.44□□□□□ -1.54
LRFN5-204ENST00000554171 CALD1Q05682 793 aaKnown RBP5.43□□□□□ -1.54
LRFN5-204ENST00000554171 TRIM41Q8WV44 630 aa5.43□□□□□ -1.54
LRFN5-204ENST00000554171 SLC4A1APQ9BWU0 796 aaKnown RBP5.43□□□□□ -1.54
LRFN5-204ENST00000554171 WASHC2AQ641Q2 1341 aa5.43□□□□□ -1.54
LRFN5-204ENST00000554171 CWC22Q9HCG8 908 aaKnown RBP5.43□□□□□ -1.54
LRFN5-204ENST00000554171 IGSF5Q9NSI5 407 aa5.43□□□□□ -1.54
LRFN5-204ENST00000554171 SOX12O15370 315 aa5.42□□□□□ -1.54
LRFN5-204ENST00000554171 DNAJC14Q6Y2X3 702 aaPredicted RBP5.42□□□□□ -1.54
LRFN5-204ENST00000554171 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.42□□□□□ -1.54
LRFN5-204ENST00000554171 NISCHQ9Y2I1 1504 aa5.41□□□□□ -1.54
LRFN5-204ENST00000554171 MAPK8IP2Q13387 824 aaPredicted RBP5.41□□□□□ -1.54
LRFN5-204ENST00000554171 SH3BP1Q9Y3L3 701 aa5.41□□□□□ -1.54
LRFN5-204ENST00000554171 SETQ01105 290 aaPredicted RBP5.41□□□□□ -1.54
LRFN5-204ENST00000554171 DNAJC2Q99543 621 aaKnown RBP5.4□□□□□ -1.54
LRFN5-204ENST00000554171 IRF6O14896 467 aa5.4□□□□□ -1.55
LRFN5-204ENST00000554171 ARID4BQ4LE39 1312 aaPredicted RBP5.39□□□□□ -1.55
LRFN5-204ENST00000554171 UNC13AQ9UPW8 1703 aa5.39□□□□□ -1.55
LRFN5-204ENST00000554171 CCDC27Q2M243 656 aa5.39□□□□□ -1.55
LRFN5-204ENST00000554171 WWC1Q8IX03 1113 aa5.39□□□□□ -1.55
LRFN5-204ENST00000554171 MKL1Q969V6 931 aa5.39□□□□□ -1.55
LRFN5-204ENST00000554171 CARD10Q9BWT7 1032 aa5.39□□□□□ -1.55
LRFN5-204ENST00000554171 NME8Q8N427 588 aa5.38□□□□□ -1.55
LRFN5-204ENST00000554171 RPS6KL1Q9Y6S9 549 aa5.38□□□□□ -1.55
LRFN5-204ENST00000554171 RBM19Q9Y4C8 960 aaKnown RBP5.38□□□□□ -1.55
LRFN5-204ENST00000554171 TMTC2Q8N394 836 aa5.37□□□□□ -1.55
LRFN5-204ENST00000554171 CCDC125Q86Z20 511 aa5.37□□□□□ -1.55
LRFN5-204ENST00000554171 EGFL6Q8IUX8 553 aa5.36□□□□□ -1.55
LRFN5-204ENST00000554171 RRP9O43818 475 aaKnown RBP5.36□□□□□ -1.55
LRFN5-204ENST00000554171 BRPF1P55201 1214 aaPredicted RBP5.36□□□□□ -1.55
LRFN5-204ENST00000554171 PSMD1Q99460 953 aa5.36□□□□□ -1.55
LRFN5-204ENST00000554171 PLCD4Q9BRC7 762 aa5.36□□□□□ -1.55
LRFN5-204ENST00000554171 PPP4R3CPQ6ZMV5 832 aa5.36□□□□□ -1.55
LRFN5-204ENST00000554171 MAMSTRQ6ZN01 415 aa5.35□□□□□ -1.55
LRFN5-204ENST00000554171 CCDC96Q2M329 555 aa5.35□□□□□ -1.55
LRFN5-204ENST00000554171 PHF14O94880 888 aa5.35□□□□□ -1.55
LRFN5-204ENST00000554171 CDCA8Q53HL2 280 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms