RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PRKAR2AP13861 404 aaKnown RBP6.66□□□□□ -1.34
RDH11-204ENST00000553578 ZBTB47Q9UFB7 747 aaPredicted RBP6.66□□□□□ -1.34
RDH11-204ENST00000553578 SCRIBQ14160 1630 aa6.65□□□□□ -1.34
RDH11-204ENST00000553578 EIF4G1Q04637 1599 aaKnown RBP6.65□□□□□ -1.34
RDH11-204ENST00000553578 CHADLQ6NUI6 762 aa6.64□□□□□ -1.35
RDH11-204ENST00000553578 PIP4P2Q8N4L2 257 aa6.64□□□□□ -1.35
RDH11-204ENST00000553578 BAZ1AQ9NRL2 1556 aaPredicted RBP6.63□□□□□ -1.35
RDH11-204ENST00000553578 FXR2P51116 673 aaKnown RBP eCLIP6.63□□□□□ -1.35
RDH11-204ENST00000553578 NPM1P06748 294 aaKnown RBP eCLIP6.62□□□□□ -1.35
RDH11-204ENST00000553578 TULP1O00294 542 aaPredicted RBP6.61□□□□□ -1.35
RDH11-204ENST00000553578 RSF1Q96T23 1441 aaPredicted RBP6.6□□□□□ -1.35
RDH11-204ENST00000553578 SMARCA4P51532 1647 aa6.6□□□□□ -1.35
RDH11-204ENST00000553578 CREBZFQ9NS37 354 aa6.6□□□□□ -1.35
RDH11-204ENST00000553578 BCANQ96GW7 911 aa6.58□□□□□ -1.36
RDH11-204ENST00000553578 FARP1Q9Y4F1 1045 aaPredicted RBP6.57□□□□□ -1.36
RDH11-204ENST00000553578 POTEHQ6S545 545 aa6.56□□□□□ -1.36
RDH11-204ENST00000553578 PAK3O75914 559 aaPredicted RBP6.55□□□□□ -1.36
RDH11-204ENST00000553578 ERICH6Q7L0X2 663 aa6.55□□□□□ -1.36
RDH11-204ENST00000553578 TOP2AP11388 1531 aaKnown RBP6.55□□□□□ -1.36
RDH11-204ENST00000553578 SMARCA2P51531 1590 aa6.54□□□□□ -1.36
RDH11-204ENST00000553578 SPOCK2Q92563 424 aa6.54□□□□□ -1.36
RDH11-204ENST00000553578 MROH2BQ7Z745 1585 aa6.54□□□□□ -1.36
RDH11-204ENST00000553578 HAX1O00165 279 aa6.53□□□□□ -1.36
RDH11-204ENST00000553578 IFNLR1Q8IU57 520 aaPredicted RBP6.52□□□□□ -1.37
RDH11-204ENST00000553578 FAM212AQ96EL1 285 aa6.5□□□□□ -1.37
RDH11-204ENST00000553578 DCAF8Q5TAQ9 597 aa6.5□□□□□ -1.37
RDH11-204ENST00000553578 HMGXB3Q12766 1538 aa6.5□□□□□ -1.37
RDH11-204ENST00000553578 CIZ1Q9ULV3 898 aaPredicted RBP6.49□□□□□ -1.37
RDH11-204ENST00000553578 WIZO95785 1651 aa6.49□□□□□ -1.37
RDH11-204ENST00000553578 CFAP44Q96MT7 982 aa6.48□□□□□ -1.37
RDH11-204ENST00000553578 CECR2Q9BXF3 1484 aa6.48□□□□□ -1.37
RDH11-204ENST00000553578 TSPYL2Q9H2G4 693 aaPredicted RBP6.48□□□□□ -1.37
RDH11-204ENST00000553578 TAOK2Q9UL54 1235 aa6.48□□□□□ -1.37
RDH11-204ENST00000553578 CD44P16070 742 aaKnown RBP6.48□□□□□ -1.37
RDH11-204ENST00000553578 PRDM2Q13029 1718 aa6.47□□□□□ -1.37
RDH11-204ENST00000553578 MNX1P50219 401 aaPredicted RBP6.47□□□□□ -1.37
RDH11-204ENST00000553578 GSE1Q14687 1217 aa6.46□□□□□ -1.37
RDH11-204ENST00000553578 ZRANB1Q9UGI0 708 aa6.45□□□□□ -1.38
RDH11-204ENST00000553578 NUBP1P53384 320 aa6.43□□□□□ -1.38
RDH11-204ENST00000553578 C14orf37Q86TY3 774 aa6.43□□□□□ -1.38
RDH11-204ENST00000553578 RASEFQ8IZ41 740 aa6.43□□□□□ -1.38
RDH11-204ENST00000553578 BCL11AQ9H165 835 aa6.42□□□□□ -1.38
RDH11-204ENST00000553578 NCAPD3P42695 1498 aa6.42□□□□□ -1.38
RDH11-204ENST00000553578 PODXL2Q9NZ53 605 aa6.41□□□□□ -1.38
RDH11-204ENST00000553578 C19orf67A6NJJ6 358 aa6.41□□□□□ -1.38
RDH11-204ENST00000553578 NBR1Q14596 966 aa6.41□□□□□ -1.38
RDH11-204ENST00000553578 SUPT5HO00267 1087 aaKnown RBP6.4□□□□□ -1.39
RDH11-204ENST00000553578 ATAD2BQ9ULI0 1458 aa6.39□□□□□ -1.39
RDH11-204ENST00000553578 TRIM41Q8WV44 630 aa6.39□□□□□ -1.39
RDH11-204ENST00000553578 TIMELESSQ9UNS1 1208 aa6.39□□□□□ -1.39
RDH11-204ENST00000553578 PLCB2Q00722 1185 aa6.39□□□□□ -1.39
RDH11-204ENST00000553578 ECM2O94769 699 aaPredicted RBP6.36□□□□□ -1.39
RDH11-204ENST00000553578 PYGBP11216 843 aa6.36□□□□□ -1.39
RDH11-204ENST00000553578 BIVM-ERCC5R4GMW8 1640 aa6.36□□□□□ -1.39
RDH11-204ENST00000553578 ARID3AQ99856 593 aa6.35□□□□□ -1.39
RDH11-204ENST00000553578 CCDC88BA6NC98 1476 aa6.35□□□□□ -1.39
RDH11-204ENST00000553578 ZNF579Q8NAF0 562 aaKnown RBP6.34□□□□□ -1.39
RDH11-204ENST00000553578 PHF12Q96QT6 1004 aa6.34□□□□□ -1.39
RDH11-204ENST00000553578 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.34□□□□□ -1.39
RDH11-204ENST00000553578 HOMEZQ8IX15 550 aa6.34□□□□□ -1.39
RDH11-204ENST00000553578 CLCN6P51797 869 aa6.34□□□□□ -1.4
RDH11-204ENST00000553578 CCDC61Q9Y6R9 512 aa6.34□□□□□ -1.4
RDH11-204ENST00000553578 PAXIP1Q6ZW49 1069 aaPredicted RBP6.33□□□□□ -1.4
RDH11-204ENST00000553578 PCDHB13Q9Y5F0 798 aa6.33□□□□□ -1.4
RDH11-204ENST00000553578 EVX2Q03828 476 aa6.31□□□□□ -1.4
RDH11-204ENST00000553578 ZNF467Q7Z7K2 595 aaPredicted RBP6.31□□□□□ -1.4
RDH11-204ENST00000553578 ARXQ96QS3 562 aa6.31□□□□□ -1.4
RDH11-204ENST00000553578 SP7Q8TDD2 431 aaPredicted RBP6.3□□□□□ -1.4
RDH11-204ENST00000553578 MYT1LQ9UL68 1186 aa6.3□□□□□ -1.4
RDH11-204ENST00000553578 FAM9AQ8IZU1 332 aaPredicted RBP6.3□□□□□ -1.4
RDH11-204ENST00000553578 MAP3K13O43283 966 aa6.29□□□□□ -1.4
RDH11-204ENST00000553578 HRCP23327 699 aa6.29□□□□□ -1.4
RDH11-204ENST00000553578 KIF12Q96FN5 646 aa6.29□□□□□ -1.4
RDH11-204ENST00000553578 CHRM1P11229 460 aaPredicted RBP6.29□□□□□ -1.4
RDH11-204ENST00000553578 PKD2Q13563 968 aa6.28□□□□□ -1.4
RDH11-204ENST00000553578 SGIP1Q9BQI5 828 aa6.28□□□□□ -1.4
RDH11-204ENST00000553578 TOP2BQ02880 1626 aa6.28□□□□□ -1.4
RDH11-204ENST00000553578 GTF3C3Q9Y5Q9 886 aa6.28□□□□□ -1.4
RDH11-204ENST00000553578 DCBLD2Q96PD2 775 aa6.27□□□□□ -1.41
RDH11-204ENST00000553578 CFTRP13569 1480 aa6.27□□□□□ -1.41
RDH11-204ENST00000553578 GABBR2O75899 941 aa6.27□□□□□ -1.41
RDH11-204ENST00000553578 MS4A3Q96HJ5 214 aa6.27□□□□□ -1.41
RDH11-204ENST00000553578 BAZ1BQ9UIG0 1483 aaKnown RBP6.26□□□□□ -1.41
RDH11-204ENST00000553578 RIOK3O14730 519 aaKnown RBP6.26□□□□□ -1.41
RDH11-204ENST00000553578 PCDHB8Q9UN66 801 aa6.26□□□□□ -1.41
RDH11-204ENST00000553578 EEA1Q15075 1411 aa6.25□□□□□ -1.41
RDH11-204ENST00000553578 GALR2O43603 387 aaPredicted RBP6.24□□□□□ -1.41
RDH11-204ENST00000553578 GOLGA2Q08379 1002 aa6.24□□□□□ -1.41
RDH11-204ENST00000553578 PDAP1Q13442 181 aaKnown RBP6.24□□□□□ -1.41
RDH11-204ENST00000553578 IFNL1Q8IU54 200 aa6.24□□□□□ -1.41
RDH11-204ENST00000553578 KIF21BO75037 1637 aa6.24□□□□□ -1.41
RDH11-204ENST00000553578 VGFO15240 615 aaPredicted RBP6.23□□□□□ -1.41
RDH11-204ENST00000553578 RGL2O15211 777 aa6.22□□□□□ -1.41
RDH11-204ENST00000553578 CC2D2AQ9P2K1 1620 aa6.22□□□□□ -1.41
RDH11-204ENST00000553578 PSEN1P49768 467 aa6.22□□□□□ -1.41
RDH11-204ENST00000553578 WDR97A6NE52 1622 aa6.21□□□□□ -1.41
RDH11-204ENST00000553578 CENPBP07199 599 aaPredicted RBP6.21□□□□□ -1.42
RDH11-204ENST00000553578 PPARGC1BQ86YN6 1023 aaKnown RBP6.21□□□□□ -1.42
RDH11-204ENST00000553578 TMEM106CQ9BVX2 250 aa6.21□□□□□ -1.42
RDH11-204ENST00000553578 LAMC3Q9Y6N6 1575 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms