RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
LSM3P2-201ENST00000551246 CCDC61Q9Y6R9 512 aa8.89□□□□□ -0.99
LSM3P2-201ENST00000551246 C19orf67A6NJJ6 358 aa8.88□□□□□ -0.99
LSM3P2-201ENST00000551246 TRIM41Q8WV44 630 aa8.88□□□□□ -0.99
LSM3P2-201ENST00000551246 TSPYL2Q9H2G4 693 aaPredicted RBP8.88□□□□□ -0.99
LSM3P2-201ENST00000551246 RGL2O15211 777 aa8.86□□□□□ -0.99
LSM3P2-201ENST00000551246 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
LSM3P2-201ENST00000551246 RNF25Q96BH1 459 aaPredicted RBP8.86□□□□□ -0.99
LSM3P2-201ENST00000551246 CHRM1P11229 460 aaPredicted RBP8.85□□□□□ -0.99
LSM3P2-201ENST00000551246 POTEHQ6S545 545 aa8.85□□□□□ -0.99
LSM3P2-201ENST00000551246 PYGBP11216 843 aa8.83□□□□□ -1
LSM3P2-201ENST00000551246 ZRANB1Q9UGI0 708 aa8.81□□□□□ -1
LSM3P2-201ENST00000551246 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
LSM3P2-201ENST00000551246 EVX2Q03828 476 aa8.8□□□□□ -1
LSM3P2-201ENST00000551246 ZNF579Q8NAF0 562 aaKnown RBP8.79□□□□□ -1
LSM3P2-201ENST00000551246 KIF12Q96FN5 646 aa8.77□□□□□ -1.01
LSM3P2-201ENST00000551246 PHF12Q96QT6 1004 aa8.77□□□□□ -1.01
LSM3P2-201ENST00000551246 HAX1O00165 279 aa8.76□□□□□ -1.01
LSM3P2-201ENST00000551246 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
LSM3P2-201ENST00000551246 MAP3K13O43283 966 aa8.75□□□□□ -1.01
LSM3P2-201ENST00000551246 SGIP1Q9BQI5 828 aa8.72□□□□□ -1.01
LSM3P2-201ENST00000551246 IFNL1Q8IU54 200 aa8.71□□□□□ -1.02
LSM3P2-201ENST00000551246 PCDHB8Q9UN66 801 aa8.71□□□□□ -1.02
LSM3P2-201ENST00000551246 PCDHB13Q9Y5F0 798 aa8.71□□□□□ -1.02
LSM3P2-201ENST00000551246 VGFO15240 615 aaPredicted RBP8.7□□□□□ -1.02
LSM3P2-201ENST00000551246 DCAF8L2P0C7V8 631 aa8.7□□□□□ -1.02
LSM3P2-201ENST00000551246 ZNF467Q7Z7K2 595 aaPredicted RBP8.7□□□□□ -1.02
LSM3P2-201ENST00000551246 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
LSM3P2-201ENST00000551246 HS6ST3Q8IZP7 471 aa8.67□□□□□ -1.02
LSM3P2-201ENST00000551246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.66□□□□□ -1.02
LSM3P2-201ENST00000551246 ZFP91Q96JP5 570 aaPredicted RBP8.66□□□□□ -1.02
LSM3P2-201ENST00000551246 TTBK1Q5TCY1 1321 aaPredicted RBP8.65□□□□□ -1.02
LSM3P2-201ENST00000551246 GALR2O43603 387 aaPredicted RBP8.65□□□□□ -1.02
LSM3P2-201ENST00000551246 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
LSM3P2-201ENST00000551246 TRPC6Q9Y210 931 aa8.65□□□□□ -1.02
LSM3P2-201ENST00000551246 CHGAP10645 457 aaKnown RBP8.64□□□□□ -1.03
LSM3P2-201ENST00000551246 PDAP1Q13442 181 aaKnown RBP8.64□□□□□ -1.03
LSM3P2-201ENST00000551246 DNAJC5Q9H3Z4 198 aa8.63□□□□□ -1.03
LSM3P2-201ENST00000551246 TAOK2Q9UL54 1235 aa8.63□□□□□ -1.03
LSM3P2-201ENST00000551246 PSEN1P49768 467 aa8.62□□□□□ -1.03
LSM3P2-201ENST00000551246 STK25O00506 426 aa8.61□□□□□ -1.03
LSM3P2-201ENST00000551246 BCL11BQ9C0K0 894 aaPredicted RBP8.61□□□□□ -1.03
LSM3P2-201ENST00000551246 CLCN6P51797 869 aa8.6□□□□□ -1.03
LSM3P2-201ENST00000551246 GABBR2O75899 941 aa8.59□□□□□ -1.03
LSM3P2-201ENST00000551246 NKX1-1Q15270 411 aaPredicted RBP8.58□□□□□ -1.04
LSM3P2-201ENST00000551246 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
LSM3P2-201ENST00000551246 STK24Q9Y6E0 443 aa8.57□□□□□ -1.04
LSM3P2-201ENST00000551246 TIE1P35590 1138 aa8.56□□□□□ -1.04
LSM3P2-201ENST00000551246 SP7Q8TDD2 431 aaPredicted RBP8.56□□□□□ -1.04
LSM3P2-201ENST00000551246 BMP2KQ9NSY1 1161 aaPredicted RBP8.56□□□□□ -1.04
LSM3P2-201ENST00000551246 MYO15BQ96JP2 1530 aa8.54□□□□□ -1.04
LSM3P2-201ENST00000551246 DCAF1Q9Y4B6 1507 aa8.54□□□□□ -1.04
LSM3P2-201ENST00000551246 TTLL13PA6NNM8 815 aa8.54□□□□□ -1.04
LSM3P2-201ENST00000551246 TMEM106CQ9BVX2 250 aa8.54□□□□□ -1.04
LSM3P2-201ENST00000551246 PLCB2Q00722 1185 aa8.52□□□□□ -1.05
LSM3P2-201ENST00000551246 CABP2Q9NPB3 220 aa8.51□□□□□ -1.05
LSM3P2-201ENST00000551246 ATMINO43313 823 aaPredicted RBP8.5□□□□□ -1.05
LSM3P2-201ENST00000551246 ASTLQ6HA08 431 aaPredicted RBP8.5□□□□□ -1.05
LSM3P2-201ENST00000551246 EFCAB3Q8N7B9 438 aa8.49□□□□□ -1.05
LSM3P2-201ENST00000551246 PCGF6Q9BYE7 350 aa8.49□□□□□ -1.05
LSM3P2-201ENST00000551246 GTPBP6O43824 516 aaPredicted RBP8.48□□□□□ -1.05
LSM3P2-201ENST00000551246 ATN1P54259 1190 aaPredicted RBP8.48□□□□□ -1.05
LSM3P2-201ENST00000551246 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.48□□□□□ -1.05
LSM3P2-201ENST00000551246 POTEIP0CG38 1075 aa8.47□□□□□ -1.05
LSM3P2-201ENST00000551246 MFRPQ9BY79 579 aa8.47□□□□□ -1.05
LSM3P2-201ENST00000551246 TRIM35Q9UPQ4 493 aa8.47□□□□□ -1.05
LSM3P2-201ENST00000551246 PAXIP1Q6ZW49 1069 aaPredicted RBP8.46□□□□□ -1.06
LSM3P2-201ENST00000551246 FBXO22Q8NEZ5 403 aa8.45□□□□□ -1.06
LSM3P2-201ENST00000551246 ZEB1P37275 1124 aaPredicted RBP8.44□□□□□ -1.06
LSM3P2-201ENST00000551246 ILDR1Q86SU0 546 aaPredicted RBP8.44□□□□□ -1.06
LSM3P2-201ENST00000551246 SPRYD3Q8NCJ5 442 aa8.44□□□□□ -1.06
LSM3P2-201ENST00000551246 SOX12O15370 315 aa8.43□□□□□ -1.06
LSM3P2-201ENST00000551246 CFAP44Q96MT7 982 aa8.43□□□□□ -1.06
LSM3P2-201ENST00000551246 PHF8Q9UPP1 1060 aa8.43□□□□□ -1.06
LSM3P2-201ENST00000551246 MS4A4AQ96JQ5 239 aa8.42□□□□□ -1.06
LSM3P2-201ENST00000551246 CCDC180Q9P1Z9 1646 aa8.41□□□□□ -1.06
LSM3P2-201ENST00000551246 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
LSM3P2-201ENST00000551246 DCBLD2Q96PD2 775 aa8.41□□□□□ -1.06
LSM3P2-201ENST00000551246 SLC24A1O60721 1099 aa8.39□□□□□ -1.07
LSM3P2-201ENST00000551246 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
LSM3P2-201ENST00000551246 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
LSM3P2-201ENST00000551246 MKRN3Q13064 507 aaKnown RBP8.39□□□□□ -1.07
LSM3P2-201ENST00000551246 IER5LQ5T953 404 aa8.39□□□□□ -1.07
LSM3P2-201ENST00000551246 NLRP6P59044 892 aa8.38□□□□□ -1.07
LSM3P2-201ENST00000551246 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
LSM3P2-201ENST00000551246 PDCD7Q8N8D1 485 aaKnown RBP8.37□□□□□ -1.07
LSM3P2-201ENST00000551246 POTEFA5A3E0 1075 aa8.36□□□□□ -1.07
LSM3P2-201ENST00000551246 PPP1R37O75864 691 aa8.36□□□□□ -1.07
LSM3P2-201ENST00000551246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.35□□□□□ -1.07
LSM3P2-201ENST00000551246 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
LSM3P2-201ENST00000551246 HAP1P54257 671 aaPredicted RBP8.33□□□□□ -1.08
LSM3P2-201ENST00000551246 TRIM26Q12899 539 aaPredicted RBP8.33□□□□□ -1.08
LSM3P2-201ENST00000551246 SLC39A7Q92504 469 aa8.33□□□□□ -1.08
LSM3P2-201ENST00000551246 COLQQ9Y215 455 aaPredicted RBP8.33□□□□□ -1.08
LSM3P2-201ENST00000551246 DPY19L2Q6NUT2 758 aa8.32□□□□□ -1.08
LSM3P2-201ENST00000551246 METRNQ9UJH8 293 aa8.32□□□□□ -1.08
LSM3P2-201ENST00000551246 C7P10643 843 aa8.31□□□□□ -1.08
LSM3P2-201ENST00000551246 OCEL1Q9H607 264 aa8.31□□□□□ -1.08
LSM3P2-201ENST00000551246 NEUROD1Q13562 356 aa8.3□□□□□ -1.08
LSM3P2-201ENST00000551246 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms