RNA–Protein interactions for RNA: ENST00000551085.5

ERBB3-217, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 4,382 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-217ENST00000551085 GLIPR1L2Q4G1C9 344 aa15.65■□□□□ 0.1
ERBB3-217ENST00000551085 SIN3AQ96ST3 1273 aa15.65■□□□□ 0.1
ERBB3-217ENST00000551085 SALL2Q9Y467 1007 aaPredicted RBP15.64■□□□□ 0.09
ERBB3-217ENST00000551085 NEFMP07197 916 aa15.64■□□□□ 0.09
ERBB3-217ENST00000551085 MRS2Q9HD23 443 aa15.61■□□□□ 0.09
ERBB3-217ENST00000551085 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
ERBB3-217ENST00000551085 LAS1LQ9Y4W2 734 aaKnown RBP15.6■□□□□ 0.09
ERBB3-217ENST00000551085 IPO9Q96P70 1041 aaKnown RBP15.59■□□□□ 0.09
ERBB3-217ENST00000551085 PPM1GO15355 546 aaPredicted RBP15.57■□□□□ 0.08
ERBB3-217ENST00000551085 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
ERBB3-217ENST00000551085 TIMELESSQ9UNS1 1208 aa15.55■□□□□ 0.08
ERBB3-217ENST00000551085 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
ERBB3-217ENST00000551085 KANK4Q5T7N3 995 aaPredicted RBP15.53■□□□□ 0.08
ERBB3-217ENST00000551085 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
ERBB3-217ENST00000551085 IL27Q8NEV9 243 aa15.52■□□□□ 0.07
ERBB3-217ENST00000551085 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
ERBB3-217ENST00000551085 PPP1R15AO75807 674 aaPredicted RBP15.49■□□□□ 0.07
ERBB3-217ENST00000551085 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
ERBB3-217ENST00000551085 WIZO95785 1651 aa15.49■□□□□ 0.07
ERBB3-217ENST00000551085 DDRGK1Q96HY6 314 aa15.45■□□□□ 0.06
ERBB3-217ENST00000551085 USP35Q9P2H5 1018 aa15.44■□□□□ 0.06
ERBB3-217ENST00000551085 SETD5Q9C0A6 1442 aa15.44■□□□□ 0.06
ERBB3-217ENST00000551085 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
ERBB3-217ENST00000551085 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
ERBB3-217ENST00000551085 UBE2Q2Q8WVN8 375 aa15.36■□□□□ 0.05
ERBB3-217ENST00000551085 P3H3Q8IVL6 736 aa15.34■□□□□ 0.05
ERBB3-217ENST00000551085 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
ERBB3-217ENST00000551085 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
ERBB3-217ENST00000551085 TMC1Q8TDI8 760 aa15.34■□□□□ 0.05
ERBB3-217ENST00000551085 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
ERBB3-217ENST00000551085 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
ERBB3-217ENST00000551085 GSE1Q14687 1217 aa15.31■□□□□ 0.04
ERBB3-217ENST00000551085 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
ERBB3-217ENST00000551085 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
ERBB3-217ENST00000551085 ZNF326Q5BKZ1 582 aaKnown RBP15.29■□□□□ 0.04
ERBB3-217ENST00000551085 HSPA5P11021 654 aaKnown RBP15.29■□□□□ 0.04
ERBB3-217ENST00000551085 ARXQ96QS3 562 aa15.28■□□□□ 0.04
ERBB3-217ENST00000551085 KIF21BO75037 1637 aa15.28■□□□□ 0.04
ERBB3-217ENST00000551085 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.04
ERBB3-217ENST00000551085 BRPF3Q9ULD4 1205 aa15.27■□□□□ 0.03
ERBB3-217ENST00000551085 NAP1L5Q96NT1 182 aaPredicted RBP15.27■□□□□ 0.03
ERBB3-217ENST00000551085 NUDCQ9Y266 331 aa15.27■□□□□ 0.03
ERBB3-217ENST00000551085 RRBP1Q9P2E9 1410 aaKnown RBP15.25■□□□□ 0.03
ERBB3-217ENST00000551085 PKNOX2Q96KN3 472 aa15.24■□□□□ 0.03
ERBB3-217ENST00000551085 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
ERBB3-217ENST00000551085 PDE4AP27815 886 aa15.23■□□□□ 0.03
ERBB3-217ENST00000551085 PRKRIP1Q9H875 184 aaPredicted RBP15.2■□□□□ 0.02
ERBB3-217ENST00000551085 VSIG10Q8N0Z9 540 aa15.19■□□□□ 0.02
ERBB3-217ENST00000551085 NACADO15069 1562 aa15.18■□□□□ 0.02
ERBB3-217ENST00000551085 CHIC2Q9UKJ5 165 aa15.16■□□□□ 0.02
ERBB3-217ENST00000551085 HSP90AA1P07900 732 aaKnown RBP15.14■□□□□ 0.01
ERBB3-217ENST00000551085 NFKBIBQ15653 356 aa15.14■□□□□ 0.01
ERBB3-217ENST00000551085 L1TD1Q5T7N2 865 aaKnown RBP15.13■□□□□ 0.01
ERBB3-217ENST00000551085 FRAT1Q92837 279 aaPredicted RBP15.13■□□□□ 0.01
ERBB3-217ENST00000551085 SMARCA2P51531 1590 aa15.13■□□□□ 0.01
ERBB3-217ENST00000551085 RRP7BPQ9NSQ0 103 aa15.12■□□□□ 0.01
ERBB3-217ENST00000551085 BECN1Q14457 450 aa15.12■□□□□ 0.01
ERBB3-217ENST00000551085 PNNQ9H307 717 aaKnown RBP15.12■□□□□ 0.01
ERBB3-217ENST00000551085 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
ERBB3-217ENST00000551085 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
ERBB3-217ENST00000551085 MS4A1P11836 297 aa15.11■□□□□ 0.01
ERBB3-217ENST00000551085 HSP90AA2PQ14568 343 aaPredicted RBP15.1■□□□□ 0.01
ERBB3-217ENST00000551085 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
ERBB3-217ENST00000551085 MTUS2Q5JR59 1369 aa15.1■□□□□ 0.01
ERBB3-217ENST00000551085 RCAN3Q9UKA8 241 aa15.1■□□□□ 0.01
ERBB3-217ENST00000551085 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
ERBB3-217ENST00000551085 CCDC184Q52MB2 194 aa15.1■□□□□ 0.01
ERBB3-217ENST00000551085 EXOC6Q8TAG9 804 aa15.08■□□□□ 0.01
ERBB3-217ENST00000551085 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0
ERBB3-217ENST00000551085 AKNAQ7Z591 1439 aa15.08■□□□□ 0
ERBB3-217ENST00000551085 FAM43AQ8N2R8 423 aa15.08■□□□□ 0
ERBB3-217ENST00000551085 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.07■□□□□ 0
ERBB3-217ENST00000551085 CNTLNQ9NXG0 1405 aa15.06■□□□□ 0
ERBB3-217ENST00000551085 RGS3P49796 1198 aa15.06■□□□□ 0
ERBB3-217ENST00000551085 TRIM44Q96DX7 344 aaPredicted RBP15.06■□□□□ 0
ERBB3-217ENST00000551085 ARHGAP35Q9NRY4 1499 aa15.05■□□□□ -0
ERBB3-217ENST00000551085 RRP1P56182 461 aaKnown RBP15.05■□□□□ -0
ERBB3-217ENST00000551085 FHAD1B1AJZ9 1412 aa15.05■□□□□ -0
ERBB3-217ENST00000551085 ARAP1Q96P48 1450 aa15.04■□□□□ -0
ERBB3-217ENST00000551085 BACH2Q9BYV9 841 aa15.04■□□□□ -0
ERBB3-217ENST00000551085 CUX2O14529 1486 aa15.03■□□□□ -0
ERBB3-217ENST00000551085 MAPKBP1O60336 1514 aa15.03■□□□□ -0
ERBB3-217ENST00000551085 ANP32BQ92688 251 aaKnown RBP15.03■□□□□ -0
ERBB3-217ENST00000551085 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
ERBB3-217ENST00000551085 SMG6Q86US8 1419 aaKnown RBP15.01□□□□□ -0.01
ERBB3-217ENST00000551085 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
ERBB3-217ENST00000551085 WASHC2CQ9Y4E1 1318 aa15□□□□□ -0.01
ERBB3-217ENST00000551085 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
ERBB3-217ENST00000551085 L3MBTL2Q969R5 705 aa14.99□□□□□ -0.01
ERBB3-217ENST00000551085 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
ERBB3-217ENST00000551085 ARID4BQ4LE39 1312 aaPredicted RBP14.98□□□□□ -0.01
ERBB3-217ENST00000551085 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
ERBB3-217ENST00000551085 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
ERBB3-217ENST00000551085 SLKQ9H2G2 1235 aaPredicted RBP14.96□□□□□ -0.01
ERBB3-217ENST00000551085 CCDC18Q5T9S5 1454 aa14.96□□□□□ -0.01
ERBB3-217ENST00000551085 FRAT2O75474 233 aaPredicted RBP14.96□□□□□ -0.01
ERBB3-217ENST00000551085 FMN1Q68DA7 1419 aa14.96□□□□□ -0.02
ERBB3-217ENST00000551085 GOLGA6L3A6NEY3 463 aa14.95□□□□□ -0.02
ERBB3-217ENST00000551085 SYNJ1O43426 1573 aa14.95□□□□□ -0.02
ERBB3-217ENST00000551085 FAM161AQ3B820 660 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms