RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 GSK3AP49840 483 aa1.58□□□□□ -2.16
CEP290-203ENST00000547691 ILDR2Q71H61 639 aa1.57□□□□□ -2.16
CEP290-203ENST00000547691 KRTAP4-9Q9BYQ8 210 aa1.57□□□□□ -2.16
CEP290-203ENST00000547691 HOXB3P14651 431 aaPredicted RBP1.57□□□□□ -2.16
CEP290-203ENST00000547691 CREBZFQ9NS37 354 aa1.56□□□□□ -2.16
CEP290-203ENST00000547691 KRTAP5-3Q6L8H2 238 aa1.56□□□□□ -2.16
CEP290-203ENST00000547691 IRX5P78411 483 aaPredicted RBP1.56□□□□□ -2.16
CEP290-203ENST00000547691 C7P10643 843 aa1.54□□□□□ -2.16
CEP290-203ENST00000547691 POTEEQ6S8J3 1075 aa1.54□□□□□ -2.16
CEP290-203ENST00000547691 HAX1O00165 279 aa1.53□□□□□ -2.16
CEP290-203ENST00000547691 IER5LQ5T953 404 aa1.52□□□□□ -2.17
CEP290-203ENST00000547691 COLQQ9Y215 455 aaPredicted RBP1.51□□□□□ -2.17
CEP290-203ENST00000547691 CCDC61Q9Y6R9 512 aa1.51□□□□□ -2.17
CEP290-203ENST00000547691 KRTAP4-5Q9BYR2 181 aa1.51□□□□□ -2.17
CEP290-203ENST00000547691 SLC39A7Q92504 469 aa1.5□□□□□ -2.17
CEP290-203ENST00000547691 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
CEP290-203ENST00000547691 KRTAP1-3Q8IUG1 177 aa1.49□□□□□ -2.17
CEP290-203ENST00000547691 PRKAR2AP13861 404 aaKnown RBP1.49□□□□□ -2.17
CEP290-203ENST00000547691 FARP1Q9Y4F1 1045 aaPredicted RBP1.48□□□□□ -2.17
CEP290-203ENST00000547691 CAPN15O75808 1086 aa1.48□□□□□ -2.17
CEP290-203ENST00000547691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP1.48□□□□□ -2.17
CEP290-203ENST00000547691 APLP2Q06481 763 aa1.48□□□□□ -2.17
CEP290-203ENST00000547691 ATN1P54259 1190 aaPredicted RBP1.47□□□□□ -2.17
CEP290-203ENST00000547691 KRTAP9-8Q9BYQ0 159 aa1.47□□□□□ -2.17
CEP290-203ENST00000547691 HRO43593 1189 aa1.46□□□□□ -2.18
CEP290-203ENST00000547691 PDCD7Q8N8D1 485 aaKnown RBP1.45□□□□□ -2.18
CEP290-203ENST00000547691 MAMSTRQ6ZN01 415 aa1.45□□□□□ -2.18
CEP290-203ENST00000547691 KRTAP4-11Q9BYQ6 195 aa1.45□□□□□ -2.18
CEP290-203ENST00000547691 ZFHX4Q86UP3 3567 aa1.45□□□□□ -2.18
CEP290-203ENST00000547691 BMP2KQ9NSY1 1161 aaPredicted RBP1.44□□□□□ -2.18
CEP290-203ENST00000547691 METRNQ9UJH8 293 aa1.44□□□□□ -2.18
CEP290-203ENST00000547691 SPDYE2BA6NHP3 402 aa1.43□□□□□ -2.18
CEP290-203ENST00000547691 SPDYE6P0CI01 402 aa1.43□□□□□ -2.18
CEP290-203ENST00000547691 SPDYE2Q495Y8 402 aa1.43□□□□□ -2.18
CEP290-203ENST00000547691 SGIP1Q9BQI5 828 aa1.42□□□□□ -2.18
CEP290-203ENST00000547691 BPTFQ12830 3046 aa1.42□□□□□ -2.18
CEP290-203ENST00000547691 OSCARQ8IYS5 282 aa1.42□□□□□ -2.18
CEP290-203ENST00000547691 LCE1DQ5T752 114 aa1.41□□□□□ -2.18
CEP290-203ENST00000547691 TRPC6Q9Y210 931 aa1.41□□□□□ -2.18
CEP290-203ENST00000547691 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
CEP290-203ENST00000547691 LSRQ86X29 649 aaPredicted RBP1.4□□□□□ -2.18
CEP290-203ENST00000547691 POLA2Q14181 598 aa1.4□□□□□ -2.19
CEP290-203ENST00000547691 TIE1P35590 1138 aa1.4□□□□□ -2.19
CEP290-203ENST00000547691 KIF12Q96FN5 646 aa1.39□□□□□ -2.19
CEP290-203ENST00000547691 ABCB7O75027 752 aa1.38□□□□□ -2.19
CEP290-203ENST00000547691 PTGER2P43116 358 aa1.38□□□□□ -2.19
CEP290-203ENST00000547691 CD44P16070 742 aaKnown RBP1.38□□□□□ -2.19
CEP290-203ENST00000547691 TRHP20396 242 aaPredicted RBP1.38□□□□□ -2.19
CEP290-203ENST00000547691 NBPF19A0A087WUL8 3843 aa1.37□□□□□ -2.19
CEP290-203ENST00000547691 SPTBN5Q9NRC6 3674 aaKnown RBP1.37□□□□□ -2.19
CEP290-203ENST00000547691 SAMD1Q6SPF0 538 aaPredicted RBP1.37□□□□□ -2.19
CEP290-203ENST00000547691 BHMG1C9JSJ3 638 aaPredicted RBP1.37□□□□□ -2.19
CEP290-203ENST00000547691 DCBLD2Q96PD2 775 aa1.37□□□□□ -2.19
CEP290-203ENST00000547691 HOXB1P14653 301 aaPredicted RBP1.36□□□□□ -2.19
CEP290-203ENST00000547691 GPR153Q6NV75 609 aa1.36□□□□□ -2.19
CEP290-203ENST00000547691 ITGBL1O95965 494 aaPredicted RBP1.36□□□□□ -2.19
CEP290-203ENST00000547691 HS3ST6Q96QI5 342 aa1.36□□□□□ -2.19
CEP290-203ENST00000547691 ZBTB12Q9Y330 459 aaPredicted RBP1.36□□□□□ -2.19
CEP290-203ENST00000547691 WIPF1O43516 503 aa1.36□□□□□ -2.19
CEP290-203ENST00000547691 KIF3CO14782 793 aa1.34□□□□□ -2.19
CEP290-203ENST00000547691 FAM163AQ96GL9 167 aaPredicted RBP1.34□□□□□ -2.19
CEP290-203ENST00000547691 ZNF687Q8N1G0 1237 aa1.34□□□□□ -2.19
CEP290-203ENST00000547691 MS4A3Q96HJ5 214 aa1.34□□□□□ -2.19
CEP290-203ENST00000547691 XP32Q5T750 250 aa1.33□□□□□ -2.2
CEP290-203ENST00000547691 TTLL13PA6NNM8 815 aa1.33□□□□□ -2.2
CEP290-203ENST00000547691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP1.32□□□□□ -2.2
CEP290-203ENST00000547691 HNRNPUL2Q1KMD3 747 aaKnown RBP1.32□□□□□ -2.2
CEP290-203ENST00000547691 DNAJC5GQ8N7S2 189 aa1.32□□□□□ -2.2
CEP290-203ENST00000547691 BSNQ9UPA5 3926 aa1.31□□□□□ -2.2
CEP290-203ENST00000547691 EMID1Q96A84 441 aaPredicted RBP1.31□□□□□ -2.2
CEP290-203ENST00000547691 SCUBE2Q9NQ36 999 aa1.31□□□□□ -2.2
CEP290-203ENST00000547691 CCDC180Q9P1Z9 1646 aa1.31□□□□□ -2.2
CEP290-203ENST00000547691 ATXN8OSP0DMR3 200 aa1.3□□□□□ -2.2
CEP290-203ENST00000547691 SPDYE1Q8NFV5 336 aaPredicted RBP1.3□□□□□ -2.2
CEP290-203ENST00000547691 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
CEP290-203ENST00000547691 A0A0G2JS52 829 aa1.29□□□□□ -2.2
CEP290-203ENST00000547691 NCBP3Q53F19 620 aaKnown RBP1.29□□□□□ -2.2
CEP290-203ENST00000547691 SLC4A5Q9BY07 1137 aa1.29□□□□□ -2.2
CEP290-203ENST00000547691 ZSWIM6Q9HCJ5 1215 aa1.28□□□□□ -2.2
CEP290-203ENST00000547691 CLEC11AQ9Y240 323 aa1.28□□□□□ -2.2
CEP290-203ENST00000547691 USP34Q70CQ2 3546 aa1.28□□□□□ -2.2
CEP290-203ENST00000547691 GSC2O15499 205 aa1.28□□□□□ -2.2
CEP290-203ENST00000547691 NISCHQ9Y2I1 1504 aa1.28□□□□□ -2.2
CEP290-203ENST00000547691 PAK3O75914 559 aaPredicted RBP1.28□□□□□ -2.21
CEP290-203ENST00000547691 PHF12Q96QT6 1004 aa1.27□□□□□ -2.21
CEP290-203ENST00000547691 MYCNP04198 464 aaPredicted RBP1.27□□□□□ -2.21
CEP290-203ENST00000547691 CHADLQ6NUI6 762 aa1.27□□□□□ -2.21
CEP290-203ENST00000547691 TMEM92Q6UXU6 159 aa1.26□□□□□ -2.21
CEP290-203ENST00000547691 KRTAP9-3Q9BYQ3 159 aa1.26□□□□□ -2.21
CEP290-203ENST00000547691 LCE3BQ5TA77 95 aa1.25□□□□□ -2.21
CEP290-203ENST00000547691 RELNP78509 3460 aa1.25□□□□□ -2.21
CEP290-203ENST00000547691 SHROOM4Q9ULL8 1493 aa1.25□□□□□ -2.21
CEP290-203ENST00000547691 UNC13AQ9UPW8 1703 aa1.24□□□□□ -2.21
CEP290-203ENST00000547691 CRIPAKQ8N1N5 446 aa1.24□□□□□ -2.21
CEP290-203ENST00000547691 RNF166Q96A37 237 aaPredicted RBP1.24□□□□□ -2.21
CEP290-203ENST00000547691 SLC34A2O95436 690 aa1.23□□□□□ -2.21
CEP290-203ENST00000547691 SUZ12Q15022 739 aaKnown RBP1.23□□□□□ -2.21
CEP290-203ENST00000547691 ITGB2P05107 769 aa1.23□□□□□ -2.21
CEP290-203ENST00000547691 DNAH14Q0VDD8 3507 aa1.23□□□□□ -2.21
CEP290-203ENST00000547691 SNPHO15079 494 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms