RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 GTPBP6O43824 516 aaPredicted RBP16.14■□□□□ 0.17
LRP6-205ENST00000540527 ARID3AQ99856 593 aa16.13■□□□□ 0.17
LRP6-205ENST00000540527 PDIA4P13667 645 aaKnown RBP16.11■□□□□ 0.17
LRP6-205ENST00000540527 NKX1-1Q15270 411 aaPredicted RBP16.11■□□□□ 0.17
LRP6-205ENST00000540527 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
LRP6-205ENST00000540527 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
LRP6-205ENST00000540527 C1orf115Q9H7X2 142 aa16.04■□□□□ 0.16
LRP6-205ENST00000540527 CIZ1Q9ULV3 898 aaPredicted RBP16.03■□□□□ 0.16
LRP6-205ENST00000540527 ZC3H15Q8WU90 426 aaKnown RBP16.02■□□□□ 0.16
LRP6-205ENST00000540527 SLC24A3Q9HC58 644 aa16■□□□□ 0.15
LRP6-205ENST00000540527 U3KPZ7 1027 aaPredicted RBP15.98■□□□□ 0.15
LRP6-205ENST00000540527 PLCD3Q8N3E9 789 aa15.97■□□□□ 0.15
LRP6-205ENST00000540527 NECTIN2Q92692 538 aa15.97■□□□□ 0.15
LRP6-205ENST00000540527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
LRP6-205ENST00000540527 STAG3Q9UJ98 1225 aa15.96■□□□□ 0.15
LRP6-205ENST00000540527 SHROOM4Q9ULL8 1493 aa15.92■□□□□ 0.14
LRP6-205ENST00000540527 EIF5BO60841 1220 aaKnown RBP15.92■□□□□ 0.14
LRP6-205ENST00000540527 KCNV2Q8TDN2 545 aa15.92■□□□□ 0.14
LRP6-205ENST00000540527 RNF25Q96BH1 459 aaPredicted RBP15.85■□□□□ 0.13
LRP6-205ENST00000540527 APBB1O00213 710 aa15.8■□□□□ 0.12
LRP6-205ENST00000540527 HMGB1P09429 215 aaKnown RBP15.8■□□□□ 0.12
LRP6-205ENST00000540527 RYDENQ9NUL5 291 aaKnown RBP15.8■□□□□ 0.12
LRP6-205ENST00000540527 IGSF3O75054 1194 aa15.78■□□□□ 0.12
LRP6-205ENST00000540527 ARID3CA6NKF2 412 aa15.77■□□□□ 0.12
LRP6-205ENST00000540527 KCTD17Q8N5Z5 321 aa15.77■□□□□ 0.12
LRP6-205ENST00000540527 WDR70Q9NW82 654 aa15.76■□□□□ 0.11
LRP6-205ENST00000540527 MIER1Q8N108 512 aa15.75■□□□□ 0.11
LRP6-205ENST00000540527 ZMYND10O75800 440 aa15.72■□□□□ 0.11
LRP6-205ENST00000540527 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
LRP6-205ENST00000540527 RIOK3O14730 519 aaKnown RBP15.68■□□□□ 0.1
LRP6-205ENST00000540527 RAD21O60216 631 aa15.68■□□□□ 0.1
LRP6-205ENST00000540527 STK25O00506 426 aa15.66■□□□□ 0.1
LRP6-205ENST00000540527 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
LRP6-205ENST00000540527 RGS22Q8NE09 1264 aa15.65■□□□□ 0.1
LRP6-205ENST00000540527 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
LRP6-205ENST00000540527 HSP90B1P14625 803 aaKnown RBP15.64■□□□□ 0.09
LRP6-205ENST00000540527 IL27Q8NEV9 243 aa15.64■□□□□ 0.09
LRP6-205ENST00000540527 TRAIPQ9BWF2 469 aa15.64■□□□□ 0.09
LRP6-205ENST00000540527 MKRN3Q13064 507 aaKnown RBP15.62■□□□□ 0.09
LRP6-205ENST00000540527 ARHGEF1Q92888 912 aaKnown RBP15.6■□□□□ 0.09
LRP6-205ENST00000540527 GPBP1L1Q9HC44 474 aaPredicted RBP15.6■□□□□ 0.09
LRP6-205ENST00000540527 TESPA1A2RU30 521 aaPredicted RBP15.59■□□□□ 0.09
LRP6-205ENST00000540527 CCDC82Q8N4S0 544 aa15.57■□□□□ 0.08
LRP6-205ENST00000540527 GSE1Q14687 1217 aa15.56■□□□□ 0.08
LRP6-205ENST00000540527 BARGINQ6ZT62 677 aa15.56■□□□□ 0.08
LRP6-205ENST00000540527 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
LRP6-205ENST00000540527 FLIIQ13045 1269 aa15.54■□□□□ 0.08
LRP6-205ENST00000540527 POLA2Q14181 598 aa15.54■□□□□ 0.08
LRP6-205ENST00000540527 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
LRP6-205ENST00000540527 AK7Q96M32 723 aa15.53■□□□□ 0.08
LRP6-205ENST00000540527 KDM4CQ9H3R0 1056 aa15.52■□□□□ 0.08
LRP6-205ENST00000540527 CADPS2Q86UW7 1296 aa15.5■□□□□ 0.07
LRP6-205ENST00000540527 PUS7Q96PZ0 661 aaKnown RBP15.5■□□□□ 0.07
LRP6-205ENST00000540527 MTMR7Q9Y216 660 aa15.5■□□□□ 0.07
LRP6-205ENST00000540527 TMCO4Q5TGY1 634 aa15.48■□□□□ 0.07
LRP6-205ENST00000540527 SEMA3EO15041 775 aa15.47■□□□□ 0.07
LRP6-205ENST00000540527 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
LRP6-205ENST00000540527 SGIP1Q9BQI5 828 aa15.45■□□□□ 0.06
LRP6-205ENST00000540527 A6NJR5 290 aa15.42■□□□□ 0.06
LRP6-205ENST00000540527 AEBP1Q8IUX7 1158 aa15.42■□□□□ 0.06
LRP6-205ENST00000540527 RBM25P49756 843 aaKnown RBP15.41■□□□□ 0.06
LRP6-205ENST00000540527 MFAP1P55081 439 aaKnown RBP15.4■□□□□ 0.06
LRP6-205ENST00000540527 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
LRP6-205ENST00000540527 BCL11BQ9C0K0 894 aaPredicted RBP15.4■□□□□ 0.06
LRP6-205ENST00000540527 STK24Q9Y6E0 443 aa15.4■□□□□ 0.06
LRP6-205ENST00000540527 TRAK2O60296 914 aa15.39■□□□□ 0.05
LRP6-205ENST00000540527 FOXD4L5Q5VV16 416 aaPredicted RBP15.33■□□□□ 0.04
LRP6-205ENST00000540527 FOXD4L4Q8WXT5 416 aaPredicted RBP15.33■□□□□ 0.04
LRP6-205ENST00000540527 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
LRP6-205ENST00000540527 E2F4Q16254 413 aa15.31■□□□□ 0.04
LRP6-205ENST00000540527 ZNF428Q96B54 188 aa15.31■□□□□ 0.04
LRP6-205ENST00000540527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.3■□□□□ 0.04
LRP6-205ENST00000540527 ZFP91Q96JP5 570 aaPredicted RBP15.3■□□□□ 0.04
LRP6-205ENST00000540527 E9PSI1 815 aa15.29■□□□□ 0.04
LRP6-205ENST00000540527 ONECUT3O60422 494 aaPredicted RBP15.29■□□□□ 0.04
LRP6-205ENST00000540527 PDE4DQ08499 809 aa15.29■□□□□ 0.04
LRP6-205ENST00000540527 GZF1Q9H116 711 aaPredicted RBP15.28■□□□□ 0.04
LRP6-205ENST00000540527 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
LRP6-205ENST00000540527 TRIM66O15016 1216 aa15.26■□□□□ 0.03
LRP6-205ENST00000540527 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
LRP6-205ENST00000540527 KRI1Q8N9T8 703 aaKnown RBP15.25■□□□□ 0.03
LRP6-205ENST00000540527 CLUAP1Q96AJ1 413 aa15.24■□□□□ 0.03
LRP6-205ENST00000540527 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
LRP6-205ENST00000540527 FAM117AQ9C073 453 aa15.21■□□□□ 0.03
LRP6-205ENST00000540527 NUBP1P53384 320 aa15.2■□□□□ 0.02
LRP6-205ENST00000540527 SERPINA10Q9UK55 444 aa15.2■□□□□ 0.02
LRP6-205ENST00000540527 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
LRP6-205ENST00000540527 SSUH2Q9Y2M2 353 aa15.19■□□□□ 0.02
LRP6-205ENST00000540527 CHRM1P11229 460 aaPredicted RBP15.18■□□□□ 0.02
LRP6-205ENST00000540527 CCDC97Q96F63 343 aaPredicted RBP15.16■□□□□ 0.02
LRP6-205ENST00000540527 DDRGK1Q96HY6 314 aa15.16■□□□□ 0.02
LRP6-205ENST00000540527 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
LRP6-205ENST00000540527 PLEKHG3A1L390 1219 aa15.14■□□□□ 0.01
LRP6-205ENST00000540527 RETREG2Q8NC44 543 aa15.14■□□□□ 0.01
LRP6-205ENST00000540527 GPIHBP1Q8IV16 184 aa15.13■□□□□ 0.01
LRP6-205ENST00000540527 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
LRP6-205ENST00000540527 IRF5Q13568 498 aa15.08■□□□□ 0
LRP6-205ENST00000540527 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
LRP6-205ENST00000540527 SPDYE6P0CI01 402 aa15.07■□□□□ 0
LRP6-205ENST00000540527 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms