RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 RBM19Q9Y4C8 960 aaKnown RBP5.4□□□□□ -1.54
SOX6-217ENST00000533870 TCERG1O14776 1098 aaKnown RBP5.4□□□□□ -1.55
SOX6-217ENST00000533870 DDX10Q13206 875 aaKnown RBP5.4□□□□□ -1.55
SOX6-217ENST00000533870 ITGAEP38570 1179 aa5.39□□□□□ -1.55
SOX6-217ENST00000533870 UPF2Q9HAU5 1272 aaKnown RBP5.39□□□□□ -1.55
SOX6-217ENST00000533870 MRS2Q9HD23 443 aa5.39□□□□□ -1.55
SOX6-217ENST00000533870 NOP58Q9Y2X3 529 aaKnown RBP5.39□□□□□ -1.55
SOX6-217ENST00000533870 MS4A1P11836 297 aa5.38□□□□□ -1.55
SOX6-217ENST00000533870 BCANQ96GW7 911 aa5.38□□□□□ -1.55
SOX6-217ENST00000533870 MTUS2Q5JR59 1369 aa5.38□□□□□ -1.55
SOX6-217ENST00000533870 KTN1Q86UP2 1357 aaKnown RBP5.38□□□□□ -1.55
SOX6-217ENST00000533870 ATP1B4Q9UN42 357 aaPredicted RBP5.38□□□□□ -1.55
SOX6-217ENST00000533870 CDCA8Q53HL2 280 aa5.37□□□□□ -1.55
SOX6-217ENST00000533870 RANGAP1P46060 587 aaPredicted RBP5.37□□□□□ -1.55
SOX6-217ENST00000533870 AAMPQ13685 434 aa5.37□□□□□ -1.55
SOX6-217ENST00000533870 PHLDB1Q86UU1 1377 aa5.37□□□□□ -1.55
SOX6-217ENST00000533870 BECN1Q14457 450 aa5.37□□□□□ -1.55
SOX6-217ENST00000533870 TRIM52Q96A61 297 aa5.37□□□□□ -1.55
SOX6-217ENST00000533870 ANP32BQ92688 251 aaKnown RBP5.36□□□□□ -1.55
SOX6-217ENST00000533870 TOP2AP11388 1531 aaKnown RBP5.36□□□□□ -1.55
SOX6-217ENST00000533870 CFAP44Q96MT7 982 aa5.36□□□□□ -1.55
SOX6-217ENST00000533870 FMN1Q68DA7 1419 aa5.35□□□□□ -1.55
SOX6-217ENST00000533870 PTMSP20962 102 aa5.35□□□□□ -1.55
SOX6-217ENST00000533870 ISY1Q9ULR0 285 aaKnown RBP5.35□□□□□ -1.55
SOX6-217ENST00000533870 L1TD1Q5T7N2 865 aaKnown RBP5.35□□□□□ -1.55
SOX6-217ENST00000533870 RRBP1Q9P2E9 1410 aaKnown RBP5.35□□□□□ -1.55
SOX6-217ENST00000533870 CHMP4BQ9H444 224 aaKnown RBP5.35□□□□□ -1.55
SOX6-217ENST00000533870 STAC3Q96MF2 364 aa5.35□□□□□ -1.55
SOX6-217ENST00000533870 CECR2Q9BXF3 1484 aa5.35□□□□□ -1.55
SOX6-217ENST00000533870 NEFMP07197 916 aa5.35□□□□□ -1.55
SOX6-217ENST00000533870 CCDC18Q5T9S5 1454 aa5.35□□□□□ -1.55
SOX6-217ENST00000533870 SOGA1O94964 1423 aa5.34□□□□□ -1.56
SOX6-217ENST00000533870 ZBED9Q6R2W3 1325 aa5.34□□□□□ -1.56
SOX6-217ENST00000533870 RALBP1Q15311 655 aa5.33□□□□□ -1.56
SOX6-217ENST00000533870 TMC1Q8TDI8 760 aa5.33□□□□□ -1.56
SOX6-217ENST00000533870 WASHC2AQ641Q2 1341 aa5.33□□□□□ -1.56
SOX6-217ENST00000533870 WASHC2CQ9Y4E1 1318 aa5.33□□□□□ -1.56
SOX6-217ENST00000533870 IPO9Q96P70 1041 aaKnown RBP5.33□□□□□ -1.56
SOX6-217ENST00000533870 MROH2BQ7Z745 1585 aa5.32□□□□□ -1.56
SOX6-217ENST00000533870 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
SOX6-217ENST00000533870 RSPH6AQ9H0K4 717 aa5.31□□□□□ -1.56
SOX6-217ENST00000533870 MAP3K1Q13233 1512 aa5.31□□□□□ -1.56
SOX6-217ENST00000533870 RAB3GAP2Q9H2M9 1393 aa5.31□□□□□ -1.56
SOX6-217ENST00000533870 CCDC88BA6NC98 1476 aa5.31□□□□□ -1.56
SOX6-217ENST00000533870 NUDCQ9Y266 331 aa5.31□□□□□ -1.56
SOX6-217ENST00000533870 ERICH3Q5RHP9 1530 aa5.31□□□□□ -1.56
SOX6-217ENST00000533870 CUX2O14529 1486 aa5.3□□□□□ -1.56
SOX6-217ENST00000533870 CARMIL1Q5VZK9 1371 aa5.3□□□□□ -1.56
SOX6-217ENST00000533870 DEKP35659 375 aaKnown RBP5.3□□□□□ -1.56
SOX6-217ENST00000533870 GOLGA6L22H0YM25 854 aa5.3□□□□□ -1.56
SOX6-217ENST00000533870 SMARCA2P51531 1590 aa5.29□□□□□ -1.56
SOX6-217ENST00000533870 ARHGAP35Q9NRY4 1499 aa5.29□□□□□ -1.56
SOX6-217ENST00000533870 TSPY4P0CV99 314 aa5.29□□□□□ -1.56
SOX6-217ENST00000533870 TSPY10P0CW01 314 aa5.29□□□□□ -1.56
SOX6-217ENST00000533870 HAP1P54257 671 aaPredicted RBP5.28□□□□□ -1.56
SOX6-217ENST00000533870 RSPH4AQ5TD94 716 aa5.28□□□□□ -1.56
SOX6-217ENST00000533870 NLRP13Q86W25 1043 aa5.28□□□□□ -1.56
SOX6-217ENST00000533870 PRXQ9BXM0 1461 aa5.28□□□□□ -1.56
SOX6-217ENST00000533870 UACAQ9BZF9 1416 aa5.28□□□□□ -1.56
SOX6-217ENST00000533870 PRKRIP1Q9H875 184 aaPredicted RBP5.27□□□□□ -1.57
SOX6-217ENST00000533870 EIF3AQ14152 1382 aaKnown RBP5.27□□□□□ -1.57
SOX6-217ENST00000533870 FOXD1Q16676 465 aa5.27□□□□□ -1.57
SOX6-217ENST00000533870 TRIM44Q96DX7 344 aaPredicted RBP5.27□□□□□ -1.57
SOX6-217ENST00000533870 RAPGEF2Q9Y4G8 1499 aa5.26□□□□□ -1.57
SOX6-217ENST00000533870 AKNAQ7Z591 1439 aa5.26□□□□□ -1.57
SOX6-217ENST00000533870 FAM9BQ8IZU0 186 aa5.26□□□□□ -1.57
SOX6-217ENST00000533870 IL27Q8NEV9 243 aa5.26□□□□□ -1.57
SOX6-217ENST00000533870 CNTLNQ9NXG0 1405 aa5.26□□□□□ -1.57
SOX6-217ENST00000533870 C11orf95C9JLR9 678 aaPredicted RBP5.26□□□□□ -1.57
SOX6-217ENST00000533870 SENP3Q9H4L4 574 aaPredicted RBP5.25□□□□□ -1.57
SOX6-217ENST00000533870 SLC4A1APQ9BWU0 796 aaKnown RBP5.25□□□□□ -1.57
SOX6-217ENST00000533870 INSRP06213 1382 aa5.25□□□□□ -1.57
SOX6-217ENST00000533870 KIF21BO75037 1637 aa5.25□□□□□ -1.57
SOX6-217ENST00000533870 CGNL1Q0VF96 1302 aa5.25□□□□□ -1.57
SOX6-217ENST00000533870 MAPK8IP3Q9UPT6 1336 aa5.25□□□□□ -1.57
SOX6-217ENST00000533870 WDR43Q15061 677 aaKnown RBP eCLIP5.24□□□□□ -1.57
SOX6-217ENST00000533870 MIA2Q96PC5 1412 aa5.24□□□□□ -1.57
SOX6-217ENST00000533870 CANXP27824 592 aaKnown RBP5.24□□□□□ -1.57
SOX6-217ENST00000533870 ZBTB22O15209 634 aa5.24□□□□□ -1.57
SOX6-217ENST00000533870 TNNT2P45379 298 aaPredicted RBP5.24□□□□□ -1.57
SOX6-217ENST00000533870 MAP7D2Q96T17 732 aa5.24□□□□□ -1.57
SOX6-217ENST00000533870 HSPA5P11021 654 aaKnown RBP5.23□□□□□ -1.57
SOX6-217ENST00000533870 MTERF4Q7Z6M4 381 aaKnown RBP5.23□□□□□ -1.57
SOX6-217ENST00000533870 PNNQ9H307 717 aaKnown RBP5.23□□□□□ -1.57
SOX6-217ENST00000533870 HFM1A2PYH4 1435 aa5.23□□□□□ -1.57
SOX6-217ENST00000533870 POLR3GLQ9BT43 218 aa5.23□□□□□ -1.57
SOX6-217ENST00000533870 NINLQ9Y2I6 1382 aa5.23□□□□□ -1.57
SOX6-217ENST00000533870 NCAPD3P42695 1498 aa5.22□□□□□ -1.57
SOX6-217ENST00000533870 ATAD2BQ9ULI0 1458 aa5.22□□□□□ -1.57
SOX6-217ENST00000533870 BRD4O60885 1362 aaPredicted RBP5.22□□□□□ -1.57
SOX6-217ENST00000533870 ABCC8Q09428 1581 aa5.22□□□□□ -1.57
SOX6-217ENST00000533870 KANK4Q5T7N3 995 aaPredicted RBP5.22□□□□□ -1.57
SOX6-217ENST00000533870 CFAP53Q96M91 514 aa5.22□□□□□ -1.57
SOX6-217ENST00000533870 KIF15Q9NS87 1388 aa5.22□□□□□ -1.57
SOX6-217ENST00000533870 CENPQQ7L2Z9 268 aaPredicted RBP5.22□□□□□ -1.57
SOX6-217ENST00000533870 MYBBP1AQ9BQG0 1328 aaKnown RBP5.21□□□□□ -1.57
SOX6-217ENST00000533870 GSE1Q14687 1217 aa5.21□□□□□ -1.57
SOX6-217ENST00000533870 CADPSQ9ULU8 1353 aa5.21□□□□□ -1.58
SOX6-217ENST00000533870 SKOR2Q2VWA4 1001 aaPredicted RBP5.21□□□□□ -1.58
SOX6-217ENST00000533870 AQRO60306 1485 aaKnown RBP eCLIP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms