RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
CAPRIN1-206ENST00000528948 CREBZFQ9NS37 354 aa13.57□□□□□ -0.24
CAPRIN1-206ENST00000528948 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
CAPRIN1-206ENST00000528948 MIER1Q8N108 512 aa13.53□□□□□ -0.24
CAPRIN1-206ENST00000528948 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
CAPRIN1-206ENST00000528948 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
CAPRIN1-206ENST00000528948 ZBTB47Q9UFB7 747 aaPredicted RBP13.48□□□□□ -0.25
CAPRIN1-206ENST00000528948 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
CAPRIN1-206ENST00000528948 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
CAPRIN1-206ENST00000528948 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
CAPRIN1-206ENST00000528948 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
CAPRIN1-206ENST00000528948 ANP32EQ9BTT0 268 aa13.42□□□□□ -0.26
CAPRIN1-206ENST00000528948 ABCC9O60706 1549 aa13.42□□□□□ -0.26
CAPRIN1-206ENST00000528948 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
CAPRIN1-206ENST00000528948 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-206ENST00000528948 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
CAPRIN1-206ENST00000528948 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
CAPRIN1-206ENST00000528948 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
CAPRIN1-206ENST00000528948 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
CAPRIN1-206ENST00000528948 RB1CC1Q8TDY2 1594 aa13.31□□□□□ -0.28
CAPRIN1-206ENST00000528948 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
CAPRIN1-206ENST00000528948 MYT1LQ9UL68 1186 aa13.29□□□□□ -0.28
CAPRIN1-206ENST00000528948 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-206ENST00000528948 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
CAPRIN1-206ENST00000528948 GABBR2O75899 941 aa13.22□□□□□ -0.29
CAPRIN1-206ENST00000528948 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
CAPRIN1-206ENST00000528948 NUBP1P53384 320 aa13.17□□□□□ -0.3
CAPRIN1-206ENST00000528948 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
CAPRIN1-206ENST00000528948 CLCN6P51797 869 aa13.16□□□□□ -0.3
CAPRIN1-206ENST00000528948 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
CAPRIN1-206ENST00000528948 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
CAPRIN1-206ENST00000528948 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
CAPRIN1-206ENST00000528948 LHX8Q68G74 356 aa13.13□□□□□ -0.31
CAPRIN1-206ENST00000528948 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
CAPRIN1-206ENST00000528948 ZNF579Q8NAF0 562 aaKnown RBP13.12□□□□□ -0.31
CAPRIN1-206ENST00000528948 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-206ENST00000528948 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
CAPRIN1-206ENST00000528948 EEA1Q15075 1411 aa13.1□□□□□ -0.31
CAPRIN1-206ENST00000528948 GSE1Q14687 1217 aa13.08□□□□□ -0.32
CAPRIN1-206ENST00000528948 FAM9AQ8IZU1 332 aaPredicted RBP13.08□□□□□ -0.32
CAPRIN1-206ENST00000528948 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.32
CAPRIN1-206ENST00000528948 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
CAPRIN1-206ENST00000528948 YTHDC1Q96MU7 727 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-206ENST00000528948 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
CAPRIN1-206ENST00000528948 TNIKQ9UKE5 1360 aa13.02□□□□□ -0.33
CAPRIN1-206ENST00000528948 POTEIP0CG38 1075 aa13□□□□□ -0.33
CAPRIN1-206ENST00000528948 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
CAPRIN1-206ENST00000528948 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
CAPRIN1-206ENST00000528948 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
CAPRIN1-206ENST00000528948 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
CAPRIN1-206ENST00000528948 SGIP1Q9BQI5 828 aa12.94□□□□□ -0.34
CAPRIN1-206ENST00000528948 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
CAPRIN1-206ENST00000528948 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
CAPRIN1-206ENST00000528948 NEFLP07196 543 aa12.9□□□□□ -0.34
CAPRIN1-206ENST00000528948 CHRM1P11229 460 aaPredicted RBP12.9□□□□□ -0.34
CAPRIN1-206ENST00000528948 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
CAPRIN1-206ENST00000528948 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
CAPRIN1-206ENST00000528948 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-206ENST00000528948 MAP3K13O43283 966 aa12.86□□□□□ -0.35
CAPRIN1-206ENST00000528948 PYGBP11216 843 aa12.85□□□□□ -0.35
CAPRIN1-206ENST00000528948 PCDHB13Q9Y5F0 798 aa12.85□□□□□ -0.35
CAPRIN1-206ENST00000528948 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
CAPRIN1-206ENST00000528948 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-206ENST00000528948 GOLGA3Q08378 1498 aa12.83□□□□□ -0.36
CAPRIN1-206ENST00000528948 BAZ1AQ9NRL2 1556 aaPredicted RBP12.82□□□□□ -0.36
CAPRIN1-206ENST00000528948 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
CAPRIN1-206ENST00000528948 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
CAPRIN1-206ENST00000528948 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-206ENST00000528948 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
CAPRIN1-206ENST00000528948 BAZ1BQ9UIG0 1483 aaKnown RBP12.73□□□□□ -0.37
CAPRIN1-206ENST00000528948 TIE1P35590 1138 aa12.73□□□□□ -0.37
CAPRIN1-206ENST00000528948 KIF21BO75037 1637 aa12.73□□□□□ -0.37
CAPRIN1-206ENST00000528948 SCRIBQ14160 1630 aa12.71□□□□□ -0.37
CAPRIN1-206ENST00000528948 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
CAPRIN1-206ENST00000528948 PKD2Q13563 968 aa12.71□□□□□ -0.37
CAPRIN1-206ENST00000528948 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
CAPRIN1-206ENST00000528948 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.38
CAPRIN1-206ENST00000528948 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
CAPRIN1-206ENST00000528948 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
CAPRIN1-206ENST00000528948 CUX2O14529 1486 aa12.69□□□□□ -0.38
CAPRIN1-206ENST00000528948 PCDHB8Q9UN66 801 aa12.68□□□□□ -0.38
CAPRIN1-206ENST00000528948 CDK11AQ9UQ88 783 aaPredicted RBP12.68□□□□□ -0.38
CAPRIN1-206ENST00000528948 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
CAPRIN1-206ENST00000528948 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
CAPRIN1-206ENST00000528948 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-206ENST00000528948 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-206ENST00000528948 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-206ENST00000528948 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
CAPRIN1-206ENST00000528948 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
CAPRIN1-206ENST00000528948 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
CAPRIN1-206ENST00000528948 NACADO15069 1562 aa12.64□□□□□ -0.39
CAPRIN1-206ENST00000528948 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
CAPRIN1-206ENST00000528948 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
CAPRIN1-206ENST00000528948 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
CAPRIN1-206ENST00000528948 TRPC6Q9Y210 931 aa12.62□□□□□ -0.39
CAPRIN1-206ENST00000528948 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
CAPRIN1-206ENST00000528948 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
CAPRIN1-206ENST00000528948 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
CAPRIN1-206ENST00000528948 PSEN1P49768 467 aa12.6□□□□□ -0.39
CAPRIN1-206ENST00000528948 CLIP1P30622 1438 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms