RNA–Protein interactions for RNA: ENST00000527333.5

CKAP5-208, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5

Gene CKAP5, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-208ENST00000527333 CFTRP13569 1480 aa15.46■□□□□ 0.06
CKAP5-208ENST00000527333 CHRDL2Q6WN34 429 aa15.45■□□□□ 0.06
CKAP5-208ENST00000527333 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
CKAP5-208ENST00000527333 LAMC3Q9Y6N6 1575 aa15.44■□□□□ 0.06
CKAP5-208ENST00000527333 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
CKAP5-208ENST00000527333 NESP48681 1621 aa15.37■□□□□ 0.05
CKAP5-208ENST00000527333 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
CKAP5-208ENST00000527333 PDS5BQ9NTI5 1447 aa15.3■□□□□ 0.04
CKAP5-208ENST00000527333 MIER1Q8N108 512 aa15.29■□□□□ 0.04
CKAP5-208ENST00000527333 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
CKAP5-208ENST00000527333 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
CKAP5-208ENST00000527333 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.032e-11■■■■□ 23.6
CKAP5-208ENST00000527333 VASPP50552 380 aaPredicted RBP15.24■□□□□ 0.03
CKAP5-208ENST00000527333 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
CKAP5-208ENST00000527333 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
CKAP5-208ENST00000527333 PIP4P2Q8N4L2 257 aa15.21■□□□□ 0.03
CKAP5-208ENST00000527333 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
CKAP5-208ENST00000527333 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
CKAP5-208ENST00000527333 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
CKAP5-208ENST00000527333 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
CKAP5-208ENST00000527333 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
CKAP5-208ENST00000527333 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
CKAP5-208ENST00000527333 ZBTB47Q9UFB7 747 aaPredicted RBP15.13■□□□□ 0.01
CKAP5-208ENST00000527333 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
CKAP5-208ENST00000527333 CUX1P39880 1505 aa15.12■□□□□ 0.01
CKAP5-208ENST00000527333 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
CKAP5-208ENST00000527333 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
CKAP5-208ENST00000527333 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
CKAP5-208ENST00000527333 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
CKAP5-208ENST00000527333 KLHL34Q8N239 644 aa15.1■□□□□ 0.01
CKAP5-208ENST00000527333 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
CKAP5-208ENST00000527333 THOC2Q8NI27 1593 aaKnown RBP15.1■□□□□ 0.01
CKAP5-208ENST00000527333 WDR62O43379 1518 aa15.07■□□□□ 0
CKAP5-208ENST00000527333 TOPBP1Q92547 1522 aa15.07■□□□□ 0
CKAP5-208ENST00000527333 TRIM41Q8WV44 630 aa15.06■□□□□ 0
CKAP5-208ENST00000527333 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
CKAP5-208ENST00000527333 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
CKAP5-208ENST00000527333 POTEHQ6S545 545 aa15□□□□□ -0.01
CKAP5-208ENST00000527333 IFNLR1Q8IU57 520 aaPredicted RBP15□□□□□ -0.01
CKAP5-208ENST00000527333 FGD5Q6ZNL6 1462 aa14.99□□□□□ -0.01
CKAP5-208ENST00000527333 POLA1P09884 1462 aaPredicted RBP14.97□□□□□ -0.01
CKAP5-208ENST00000527333 MNX1P50219 401 aaPredicted RBP14.95□□□□□ -0.02
CKAP5-208ENST00000527333 CUX2O14529 1486 aa14.92□□□□□ -0.02
CKAP5-208ENST00000527333 TARBP1Q13395 1621 aaKnown RBP14.91□□□□□ -0.02
CKAP5-208ENST00000527333 SPOCK2Q92563 424 aa14.9□□□□□ -0.02
CKAP5-208ENST00000527333 SOGA1O94964 1423 aa14.9□□□□□ -0.02
CKAP5-208ENST00000527333 WDR97A6NE52 1622 aa14.89□□□□□ -0.03
CKAP5-208ENST00000527333 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
CKAP5-208ENST00000527333 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
CKAP5-208ENST00000527333 ABCA10Q8WWZ4 1543 aa14.88□□□□□ -0.03
CKAP5-208ENST00000527333 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
CKAP5-208ENST00000527333 HAX1O00165 279 aa14.83□□□□□ -0.04
CKAP5-208ENST00000527333 PAK3O75914 559 aaPredicted RBP14.81□□□□□ -0.04
CKAP5-208ENST00000527333 EEA1Q15075 1411 aa14.81□□□□□ -0.04
CKAP5-208ENST00000527333 KIF27Q86VH2 1401 aa14.8□□□□□ -0.04
CKAP5-208ENST00000527333 ABCA5Q8WWZ7 1642 aa14.8□□□□□ -0.04
CKAP5-208ENST00000527333 NUBP1P53384 320 aa14.78□□□□□ -0.04
CKAP5-208ENST00000527333 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
CKAP5-208ENST00000527333 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
CKAP5-208ENST00000527333 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
CKAP5-208ENST00000527333 FAM9AQ8IZU1 332 aaPredicted RBP14.76□□□□□ -0.05
CKAP5-208ENST00000527333 FAM212AQ96EL1 285 aa14.76□□□□□ -0.05
CKAP5-208ENST00000527333 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
CKAP5-208ENST00000527333 EIF4G3O43432 1585 aaKnown RBP14.75□□□□□ -0.05
CKAP5-208ENST00000527333 GAPVD1Q14C86 1478 aa14.75□□□□□ -0.05
CKAP5-208ENST00000527333 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
CKAP5-208ENST00000527333 C19orf67A6NJJ6 358 aa14.73□□□□□ -0.05
CKAP5-208ENST00000527333 RASEFQ8IZ41 740 aa14.73□□□□□ -0.05
CKAP5-208ENST00000527333 TSPYL2Q9H2G4 693 aaPredicted RBP14.73□□□□□ -0.05
CKAP5-208ENST00000527333 ERICH3Q5RHP9 1530 aa14.72□□□□□ -0.05
CKAP5-208ENST00000527333 PBRM1Q86U86 1689 aa14.72□□□□□ -0.05
CKAP5-208ENST00000527333 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.055e-9■■■■□ 24
CKAP5-208ENST00000527333 GSE1Q14687 1217 aa14.72□□□□□ -0.05
CKAP5-208ENST00000527333 CIZ1Q9ULV3 898 aaPredicted RBP14.71□□□□□ -0.05
CKAP5-208ENST00000527333 GRIN2BQ13224 1484 aa14.7□□□□□ -0.06
CKAP5-208ENST00000527333 IGF1RP08069 1367 aa14.69□□□□□ -0.06
CKAP5-208ENST00000527333 ZRANB1Q9UGI0 708 aa14.68□□□□□ -0.06
CKAP5-208ENST00000527333 CUL7Q14999 1698 aa14.67□□□□□ -0.06
CKAP5-208ENST00000527333 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
CKAP5-208ENST00000527333 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
CKAP5-208ENST00000527333 KIF21BO75037 1637 aa14.63□□□□□ -0.07
CKAP5-208ENST00000527333 ADAMTS12P58397 1594 aa14.62□□□□□ -0.07
CKAP5-208ENST00000527333 SNAPC4Q5SXM2 1469 aa14.61□□□□□ -0.07
CKAP5-208ENST00000527333 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
CKAP5-208ENST00000527333 FHAD1B1AJZ9 1412 aa14.59□□□□□ -0.07
CKAP5-208ENST00000527333 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.08
CKAP5-208ENST00000527333 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
CKAP5-208ENST00000527333 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
CKAP5-208ENST00000527333 SYNJ2O15056 1496 aa14.56□□□□□ -0.08
CKAP5-208ENST00000527333 EVX2Q03828 476 aa14.55□□□□□ -0.08
CKAP5-208ENST00000527333 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
CKAP5-208ENST00000527333 GOLGA3Q08378 1498 aa14.55□□□□□ -0.08
CKAP5-208ENST00000527333 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
CKAP5-208ENST00000527333 GRIN2AQ12879 1464 aa14.51□□□□□ -0.09
CKAP5-208ENST00000527333 PYGBP11216 843 aa14.5□□□□□ -0.09
CKAP5-208ENST00000527333 CHD1O14646 1710 aa14.49□□□□□ -0.09
CKAP5-208ENST00000527333 CLCN6P51797 869 aa14.49□□□□□ -0.09
CKAP5-208ENST00000527333 ECM2O94769 699 aaPredicted RBP14.48□□□□□ -0.09
CKAP5-208ENST00000527333 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
CKAP5-208ENST00000527333 CHMP7Q8WUX9 453 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms