RNA–Protein interactions for RNA: ENST00000526215.5

PUM1-218, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-218ENST00000526215 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
PUM1-218ENST00000526215 BAZ1AQ9NRL2 1556 aaPredicted RBP12.72□□□□□ -0.37
PUM1-218ENST00000526215 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
PUM1-218ENST00000526215 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
PUM1-218ENST00000526215 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
PUM1-218ENST00000526215 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
PUM1-218ENST00000526215 PEG3Q9GZU2 1588 aa12.67□□□□□ -0.38
PUM1-218ENST00000526215 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
PUM1-218ENST00000526215 CYB5RLQ6IPT4 315 aa12.61□□□□□ -0.39
PUM1-218ENST00000526215 ARHGEF11O15085 1522 aa12.59□□□□□ -0.39
PUM1-218ENST00000526215 MROH2BQ7Z745 1585 aa12.59□□□□□ -0.39
PUM1-218ENST00000526215 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
PUM1-218ENST00000526215 SOCS7O14512 581 aa12.57□□□□□ -0.4
PUM1-218ENST00000526215 LMTK3Q96Q04 1460 aa12.56□□□□□ -0.4
PUM1-218ENST00000526215 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
PUM1-218ENST00000526215 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
PUM1-218ENST00000526215 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
PUM1-218ENST00000526215 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
PUM1-218ENST00000526215 MIER1Q8N108 512 aa12.51□□□□□ -0.41
PUM1-218ENST00000526215 WDR62O43379 1518 aa12.51□□□□□ -0.41
PUM1-218ENST00000526215 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
PUM1-218ENST00000526215 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
PUM1-218ENST00000526215 CEP164Q9UPV0 1460 aa12.46□□□□□ -0.42
PUM1-218ENST00000526215 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
PUM1-218ENST00000526215 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
PUM1-218ENST00000526215 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
PUM1-218ENST00000526215 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
PUM1-218ENST00000526215 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
PUM1-218ENST00000526215 CFTRP13569 1480 aa12.4□□□□□ -0.43
PUM1-218ENST00000526215 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
PUM1-218ENST00000526215 ILDR2Q71H61 639 aa12.38□□□□□ -0.43
PUM1-218ENST00000526215 WIZO95785 1651 aa12.38□□□□□ -0.43
PUM1-218ENST00000526215 ARAP1Q96P48 1450 aa12.36□□□□□ -0.43
PUM1-218ENST00000526215 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
PUM1-218ENST00000526215 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
PUM1-218ENST00000526215 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
PUM1-218ENST00000526215 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
PUM1-218ENST00000526215 POTEHQ6S545 545 aa12.31□□□□□ -0.44
PUM1-218ENST00000526215 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
PUM1-218ENST00000526215 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
PUM1-218ENST00000526215 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
PUM1-218ENST00000526215 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
PUM1-218ENST00000526215 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
PUM1-218ENST00000526215 IFT140Q96RY7 1462 aa12.24□□□□□ -0.45
PUM1-218ENST00000526215 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
PUM1-218ENST00000526215 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
PUM1-218ENST00000526215 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.45
PUM1-218ENST00000526215 DISP3Q9P2K9 1392 aa12.18□□□□□ -0.46
PUM1-218ENST00000526215 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
PUM1-218ENST00000526215 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
PUM1-218ENST00000526215 TOPBP1Q92547 1522 aa12.15□□□□□ -0.46
PUM1-218ENST00000526215 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
PUM1-218ENST00000526215 HAX1O00165 279 aa12.14□□□□□ -0.47
PUM1-218ENST00000526215 NUBP1P53384 320 aa12.14□□□□□ -0.47
PUM1-218ENST00000526215 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
PUM1-218ENST00000526215 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
PUM1-218ENST00000526215 AQRO60306 1485 aaKnown RBP eCLIP12.11□□□□□ -0.472e-8■■■□□ 18.6
PUM1-218ENST00000526215 C19orf67A6NJJ6 358 aa12.11□□□□□ -0.47
PUM1-218ENST00000526215 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
PUM1-218ENST00000526215 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
PUM1-218ENST00000526215 GSE1Q14687 1217 aa12.09□□□□□ -0.47
PUM1-218ENST00000526215 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
PUM1-218ENST00000526215 EIF4G3O43432 1585 aaKnown RBP12.07□□□□□ -0.48
PUM1-218ENST00000526215 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
PUM1-218ENST00000526215 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
PUM1-218ENST00000526215 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
PUM1-218ENST00000526215 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
PUM1-218ENST00000526215 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
PUM1-218ENST00000526215 TARBP1Q13395 1621 aaKnown RBP12.03□□□□□ -0.48
PUM1-218ENST00000526215 CHMP7Q8WUX9 453 aaPredicted RBP12.02□□□□□ -0.49
PUM1-218ENST00000526215 CHD1O14646 1710 aa12.01□□□□□ -0.49
PUM1-218ENST00000526215 TDRD9Q8NDG6 1382 aaKnown RBP12.01□□□□□ -0.49
PUM1-218ENST00000526215 SOGA1O94964 1423 aa12.01□□□□□ -0.49
PUM1-218ENST00000526215 POLA1P09884 1462 aaPredicted RBP12.01□□□□□ -0.49
PUM1-218ENST00000526215 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
PUM1-218ENST00000526215 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
PUM1-218ENST00000526215 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
PUM1-218ENST00000526215 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
PUM1-218ENST00000526215 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
PUM1-218ENST00000526215 CLCN6P51797 869 aa11.95□□□□□ -0.5
PUM1-218ENST00000526215 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
PUM1-218ENST00000526215 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
PUM1-218ENST00000526215 MAGI1Q96QZ7 1491 aaPredicted RBP11.92□□□□□ -0.5
PUM1-218ENST00000526215 EVX2Q03828 476 aa11.92□□□□□ -0.5
PUM1-218ENST00000526215 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
PUM1-218ENST00000526215 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
PUM1-218ENST00000526215 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
PUM1-218ENST00000526215 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
PUM1-218ENST00000526215 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
PUM1-218ENST00000526215 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
PUM1-218ENST00000526215 PYGBP11216 843 aa11.87□□□□□ -0.51
PUM1-218ENST00000526215 PKD2Q13563 968 aa11.87□□□□□ -0.51
PUM1-218ENST00000526215 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
PUM1-218ENST00000526215 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
PUM1-218ENST00000526215 GAPVD1Q14C86 1478 aa11.86□□□□□ -0.51
PUM1-218ENST00000526215 KIF13AQ9H1H9 1805 aa11.86□□□□□ -0.51
PUM1-218ENST00000526215 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
PUM1-218ENST00000526215 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
PUM1-218ENST00000526215 KIF12Q96FN5 646 aa11.85□□□□□ -0.51
PUM1-218ENST00000526215 CUX1P39880 1505 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms