RNA–Protein interactions for RNA: ENST00000517030.1

RNU6-419P-201, Transcript of RNA, U6 small nuclear 419, pseudogene, humanhuman

BASIC

Gene RNU6-419P, Length 63 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-419P-201ENST00000517030 EMP3P54852 163 aa2.75□□□□□ -1.97
RNU6-419P-201ENST00000517030 Q6ZNB5 142 aa2.75□□□□□ -1.97
RNU6-419P-201ENST00000517030 KRTAP4-8Q9BYQ9 185 aa2.75□□□□□ -1.97
RNU6-419P-201ENST00000517030 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
RNU6-419P-201ENST00000517030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.72□□□□□ -1.97
RNU6-419P-201ENST00000517030 HNRNPUL2Q1KMD3 747 aaKnown RBP2.72□□□□□ -1.97
RNU6-419P-201ENST00000517030 KRTAP9-2Q9BYQ4 174 aa2.72□□□□□ -1.97
RNU6-419P-201ENST00000517030 KRTAP17-1Q9BYP8 105 aa2.71□□□□□ -1.98
RNU6-419P-201ENST00000517030 ZNF775Q96BV0 537 aaPredicted RBP2.7□□□□□ -1.98
RNU6-419P-201ENST00000517030 PHF12Q96QT6 1004 aa2.7□□□□□ -1.98
RNU6-419P-201ENST00000517030 ATN1P54259 1190 aaPredicted RBP2.69□□□□□ -1.98
RNU6-419P-201ENST00000517030 ATF5Q9Y2D1 282 aaPredicted RBP2.69□□□□□ -1.98
RNU6-419P-201ENST00000517030 ZBTB12Q9Y330 459 aaPredicted RBP2.69□□□□□ -1.98
RNU6-419P-201ENST00000517030 PRR29P0C7W0 189 aa2.68□□□□□ -1.98
RNU6-419P-201ENST00000517030 LCE2BO14633 110 aa2.67□□□□□ -1.98
RNU6-419P-201ENST00000517030 SAMD1Q6SPF0 538 aaPredicted RBP2.67□□□□□ -1.98
RNU6-419P-201ENST00000517030 COLQQ9Y215 455 aaPredicted RBP2.67□□□□□ -1.98
RNU6-419P-201ENST00000517030 SNPHO15079 494 aa2.65□□□□□ -1.99
RNU6-419P-201ENST00000517030 MS4A3Q96HJ5 214 aa2.63□□□□□ -1.99
RNU6-419P-201ENST00000517030 SEC24BO95487 1268 aa2.62□□□□□ -1.99
RNU6-419P-201ENST00000517030 SLC4A2P04920 1241 aa2.62□□□□□ -1.99
RNU6-419P-201ENST00000517030 KRTAP4-8A0A0G2JLE6 195 aa2.61□□□□□ -1.99
RNU6-419P-201ENST00000517030 RGS20O76081 388 aa2.61□□□□□ -1.99
RNU6-419P-201ENST00000517030 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
RNU6-419P-201ENST00000517030 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
RNU6-419P-201ENST00000517030 LCE3BQ5TA77 95 aa2.59□□□□□ -1.99
RNU6-419P-201ENST00000517030 ZNF787Q6DD87 383 aa2.59□□□□□ -1.99
RNU6-419P-201ENST00000517030 TRAF7Q6Q0C0 670 aa2.59□□□□□ -1.99
RNU6-419P-201ENST00000517030 PSMG3-AS1Q96PY0 264 aa2.59□□□□□ -1.99
RNU6-419P-201ENST00000517030 XP32Q5T750 250 aa2.58□□□□□ -2
RNU6-419P-201ENST00000517030 SPDYE2BA6NHP3 402 aa2.57□□□□□ -2
RNU6-419P-201ENST00000517030 SPDYE6P0CI01 402 aa2.57□□□□□ -2
RNU6-419P-201ENST00000517030 PTGER2P43116 358 aa2.57□□□□□ -2
RNU6-419P-201ENST00000517030 SPDYE2Q495Y8 402 aa2.57□□□□□ -2
RNU6-419P-201ENST00000517030 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
RNU6-419P-201ENST00000517030 KRTAP9-8Q9BYQ0 159 aa2.55□□□□□ -2
RNU6-419P-201ENST00000517030 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
RNU6-419P-201ENST00000517030 HCSTQ9UBK5 93 aa2.54□□□□□ -2
RNU6-419P-201ENST00000517030 STK17AQ9UEE5 414 aa2.54□□□□□ -2
RNU6-419P-201ENST00000517030 PAK3O75914 559 aaPredicted RBP2.53□□□□□ -2
RNU6-419P-201ENST00000517030 BMP2KQ9NSY1 1161 aaPredicted RBP2.52□□□□□ -2.01
RNU6-419P-201ENST00000517030 BTBD11A6QL63 1104 aa2.5□□□□□ -2.01
RNU6-419P-201ENST00000517030 ERBB3P21860 1342 aa2.49□□□□□ -2.01
RNU6-419P-201ENST00000517030 ANKRD13DQ6ZTN6 518 aa2.49□□□□□ -2.01
RNU6-419P-201ENST00000517030 TRPC6Q9Y210 931 aa2.49□□□□□ -2.01
RNU6-419P-201ENST00000517030 LCE2AQ5TA79 106 aaPredicted RBP2.48□□□□□ -2.01
RNU6-419P-201ENST00000517030 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
RNU6-419P-201ENST00000517030 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.47□□□□□ -2.01
RNU6-419P-201ENST00000517030 NPM3O75607 178 aaKnown RBP2.46□□□□□ -2.02
RNU6-419P-201ENST00000517030 TREML4Q6UXN2 200 aa2.45□□□□□ -2.02
RNU6-419P-201ENST00000517030 A0A0G2JS52 829 aa2.44□□□□□ -2.02
RNU6-419P-201ENST00000517030 VARS2Q5ST30 1063 aaKnown RBP2.44□□□□□ -2.02
RNU6-419P-201ENST00000517030 NCBP3Q53F19 620 aaKnown RBP2.43□□□□□ -2.02
RNU6-419P-201ENST00000517030 ZNF687Q8N1G0 1237 aa2.43□□□□□ -2.02
RNU6-419P-201ENST00000517030 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
RNU6-419P-201ENST00000517030 ZNF692Q9BU19 519 aaPredicted RBP2.43□□□□□ -2.02
RNU6-419P-201ENST00000517030 ANO8Q9HCE9 1232 aaPredicted RBP2.43□□□□□ -2.02
RNU6-419P-201ENST00000517030 SSUH2Q9Y2M2 353 aa2.43□□□□□ -2.02
RNU6-419P-201ENST00000517030 LAPTM4AQ15012 233 aa2.42□□□□□ -2.02
RNU6-419P-201ENST00000517030 GFRA3O60609 400 aa2.41□□□□□ -2.02
RNU6-419P-201ENST00000517030 IER5LQ5T953 404 aa2.41□□□□□ -2.02
RNU6-419P-201ENST00000517030 TTLL13PA6NNM8 815 aa2.4□□□□□ -2.03
RNU6-419P-201ENST00000517030 TIE1P35590 1138 aa2.4□□□□□ -2.03
RNU6-419P-201ENST00000517030 LCE1DQ5T752 114 aa2.4□□□□□ -2.03
RNU6-419P-201ENST00000517030 TRIM35Q9UPQ4 493 aa2.4□□□□□ -2.03
RNU6-419P-201ENST00000517030 HOXB1P14653 301 aaPredicted RBP2.39□□□□□ -2.03
RNU6-419P-201ENST00000517030 IFFO2Q5TF58 517 aa2.39□□□□□ -2.03
RNU6-419P-201ENST00000517030 PLCG2P16885 1265 aa2.38□□□□□ -2.03
RNU6-419P-201ENST00000517030 KRTAP4-9Q9BYQ8 210 aa2.38□□□□□ -2.03
RNU6-419P-201ENST00000517030 CREBZFQ9NS37 354 aa2.38□□□□□ -2.03
RNU6-419P-201ENST00000517030 INSM1Q01101 510 aaPredicted RBP2.37□□□□□ -2.03
RNU6-419P-201ENST00000517030 PABPN1Q86U42 306 aaKnown RBP eCLIP2.37□□□□□ -2.03
RNU6-419P-201ENST00000517030 POTECB2RU33 542 aa2.34□□□□□ -2.03
RNU6-419P-201ENST00000517030 LSM11P83369 360 aaKnown RBP eCLIP2.34□□□□□ -2.03
RNU6-419P-201ENST00000517030 HOXB3P14651 431 aaPredicted RBP2.33□□□□□ -2.04
RNU6-419P-201ENST00000517030 LORP23490 312 aaPredicted RBP2.33□□□□□ -2.04
RNU6-419P-201ENST00000517030 WIPF1O43516 503 aa2.32□□□□□ -2.04
RNU6-419P-201ENST00000517030 IRX5P78411 483 aaPredicted RBP2.32□□□□□ -2.04
RNU6-419P-201ENST00000517030 ZNF710Q8N1W2 664 aa2.32□□□□□ -2.04
RNU6-419P-201ENST00000517030 KCTD17Q8N5Z5 321 aa2.32□□□□□ -2.04
RNU6-419P-201ENST00000517030 KIF12Q96FN5 646 aa2.31□□□□□ -2.04
RNU6-419P-201ENST00000517030 NRG2O14511 850 aaPredicted RBP2.3□□□□□ -2.04
RNU6-419P-201ENST00000517030 WFS1O76024 890 aa2.3□□□□□ -2.04
RNU6-419P-201ENST00000517030 C3orf67Q6ZVT6 689 aa2.28□□□□□ -2.04
RNU6-419P-201ENST00000517030 MAP3K13O43283 966 aa2.27□□□□□ -2.05
RNU6-419P-201ENST00000517030 KCTD12Q96CX2 325 aaKnown RBP2.27□□□□□ -2.05
RNU6-419P-201ENST00000517030 KRTAP4-5Q9BYR2 181 aa2.27□□□□□ -2.05
RNU6-419P-201ENST00000517030 FAM181BA6NEQ2 426 aa2.26□□□□□ -2.05
RNU6-419P-201ENST00000517030 PTPN5P54829 565 aa2.26□□□□□ -2.05
RNU6-419P-201ENST00000517030 KRTAP19-1Q8IUB9 90 aa2.26□□□□□ -2.05
RNU6-419P-201ENST00000517030 TSPYL2Q9H2G4 693 aaPredicted RBP2.26□□□□□ -2.05
RNU6-419P-201ENST00000517030 OCEL1Q9H607 264 aa2.26□□□□□ -2.05
RNU6-419P-201ENST00000517030 CCDC61Q9Y6R9 512 aa2.26□□□□□ -2.05
RNU6-419P-201ENST00000517030 MYCNP04198 464 aaPredicted RBP2.25□□□□□ -2.05
RNU6-419P-201ENST00000517030 NPM1P06748 294 aaKnown RBP eCLIP2.25□□□□□ -2.05
RNU6-419P-201ENST00000517030 FBLN2P98095 1184 aa2.24□□□□□ -2.05
RNU6-419P-201ENST00000517030 POTEEQ6S8J3 1075 aa2.23□□□□□ -2.05
RNU6-419P-201ENST00000517030 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
RNU6-419P-201ENST00000517030 NFX1Q12986 1120 aaKnown RBP2.22□□□□□ -2.05
RNU6-419P-201ENST00000517030 MNX1P50219 401 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms