RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 GSE1Q14687 1217 aa4.98□□□□□ -1.61
SCARNA17.1-201ENST00000516211 SPDYE2BA6NHP3 402 aa4.97□□□□□ -1.61
SCARNA17.1-201ENST00000516211 SPDYE6P0CI01 402 aa4.97□□□□□ -1.61
SCARNA17.1-201ENST00000516211 SPDYE2Q495Y8 402 aa4.97□□□□□ -1.61
SCARNA17.1-201ENST00000516211 RANGAP1P46060 587 aaPredicted RBP4.95□□□□□ -1.62
SCARNA17.1-201ENST00000516211 SPINK5Q9NQ38 1064 aaPredicted RBP4.94□□□□□ -1.62
SCARNA17.1-201ENST00000516211 RIOK3O14730 519 aaKnown RBP4.93□□□□□ -1.62
SCARNA17.1-201ENST00000516211 WDR70Q9NW82 654 aa4.92□□□□□ -1.62
SCARNA17.1-201ENST00000516211 STK25O00506 426 aa4.91□□□□□ -1.62
SCARNA17.1-201ENST00000516211 SSUH2Q9Y2M2 353 aa4.91□□□□□ -1.62
SCARNA17.1-201ENST00000516211 VGFO15240 615 aaPredicted RBP4.9□□□□□ -1.63
SCARNA17.1-201ENST00000516211 GTPBP6O43824 516 aaPredicted RBP4.9□□□□□ -1.63
SCARNA17.1-201ENST00000516211 ABCB7O75027 752 aa4.9□□□□□ -1.63
SCARNA17.1-201ENST00000516211 DCAF8Q5TAQ9 597 aa4.88□□□□□ -1.63
SCARNA17.1-201ENST00000516211 LMOD2Q6P5Q4 547 aa4.88□□□□□ -1.63
SCARNA17.1-201ENST00000516211 NKX1-1Q15270 411 aaPredicted RBP4.87□□□□□ -1.63
SCARNA17.1-201ENST00000516211 FAM212AQ96EL1 285 aa4.87□□□□□ -1.63
SCARNA17.1-201ENST00000516211 OSCARQ8IYS5 282 aa4.86□□□□□ -1.63
SCARNA17.1-201ENST00000516211 RNF25Q96BH1 459 aaPredicted RBP4.86□□□□□ -1.63
SCARNA17.1-201ENST00000516211 C1QBPQ07021 282 aaKnown RBP4.85□□□□□ -1.63
SCARNA17.1-201ENST00000516211 NEUROD2Q15784 382 aa4.85□□□□□ -1.63
SCARNA17.1-201ENST00000516211 STK24Q9Y6E0 443 aa4.85□□□□□ -1.63
SCARNA17.1-201ENST00000516211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCARNA17.1-201ENST00000516211 SUPT5HO00267 1087 aaKnown RBP4.83□□□□□ -1.64
SCARNA17.1-201ENST00000516211 SGIP1Q9BQI5 828 aa4.83□□□□□ -1.64
SCARNA17.1-201ENST00000516211 PODXL2Q9NZ53 605 aa4.83□□□□□ -1.64
SCARNA17.1-201ENST00000516211 BRPF1P55201 1214 aaPredicted RBP4.82□□□□□ -1.64
SCARNA17.1-201ENST00000516211 BCL11BQ9C0K0 894 aaPredicted RBP4.82□□□□□ -1.64
SCARNA17.1-201ENST00000516211 RNF39Q9H2S5 420 aa4.82□□□□□ -1.64
SCARNA17.1-201ENST00000516211 CHRM1P11229 460 aaPredicted RBP4.81□□□□□ -1.64
SCARNA17.1-201ENST00000516211 NISCHQ9Y2I1 1504 aa4.81□□□□□ -1.64
SCARNA17.1-201ENST00000516211 CECR2Q9BXF3 1484 aa4.81□□□□□ -1.64
SCARNA17.1-201ENST00000516211 KCNV2Q8TDN2 545 aa4.8□□□□□ -1.64
SCARNA17.1-201ENST00000516211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.79□□□□□ -1.64
SCARNA17.1-201ENST00000516211 NUBP1P53384 320 aa4.79□□□□□ -1.64
SCARNA17.1-201ENST00000516211 SMYD5Q6GMV2 418 aa4.79□□□□□ -1.64
SCARNA17.1-201ENST00000516211 ZFP91Q96JP5 570 aaPredicted RBP4.79□□□□□ -1.64
SCARNA17.1-201ENST00000516211 ZC3H15Q8WU90 426 aaKnown RBP4.77□□□□□ -1.65
SCARNA17.1-201ENST00000516211 ARHGEF1Q92888 912 aaKnown RBP4.77□□□□□ -1.65
SCARNA17.1-201ENST00000516211 SLC24A3Q9HC58 644 aa4.75□□□□□ -1.65
SCARNA17.1-201ENST00000516211 DSG3P32926 999 aa4.74□□□□□ -1.65
SCARNA17.1-201ENST00000516211 RSPH6AQ9H0K4 717 aa4.74□□□□□ -1.65
SCARNA17.1-201ENST00000516211 E2F4Q16254 413 aa4.73□□□□□ -1.65
SCARNA17.1-201ENST00000516211 SPDYE1Q8NFV5 336 aaPredicted RBP4.73□□□□□ -1.65
SCARNA17.1-201ENST00000516211 ZNF467Q7Z7K2 595 aaPredicted RBP4.72□□□□□ -1.65
SCARNA17.1-201ENST00000516211 ZMYND15Q9H091 742 aa4.72□□□□□ -1.65
SCARNA17.1-201ENST00000516211 CC2D2AQ9P2K1 1620 aa4.72□□□□□ -1.65
SCARNA17.1-201ENST00000516211 TESPA1A2RU30 521 aaPredicted RBP4.71□□□□□ -1.66
SCARNA17.1-201ENST00000516211 PRR29P0C7W0 189 aa4.7□□□□□ -1.66
SCARNA17.1-201ENST00000516211 PYGBP11216 843 aa4.7□□□□□ -1.66
SCARNA17.1-201ENST00000516211 CADPS2Q86UW7 1296 aa4.7□□□□□ -1.66
SCARNA17.1-201ENST00000516211 ZMYND10O75800 440 aa4.69□□□□□ -1.66
SCARNA17.1-201ENST00000516211 UBTFP17480 764 aaKnown RBP4.69□□□□□ -1.66
SCARNA17.1-201ENST00000516211 PDAP1Q13442 181 aaKnown RBP4.69□□□□□ -1.66
SCARNA17.1-201ENST00000516211 NPM2Q86SE8 214 aaKnown RBP4.69□□□□□ -1.66
SCARNA17.1-201ENST00000516211 AK7Q96M32 723 aa4.69□□□□□ -1.66
SCARNA17.1-201ENST00000516211 SEMA3EO15041 775 aa4.68□□□□□ -1.66
SCARNA17.1-201ENST00000516211 ILDR2Q71H61 639 aa4.68□□□□□ -1.66
SCARNA17.1-201ENST00000516211 RASEFQ8IZ41 740 aa4.68□□□□□ -1.66
SCARNA17.1-201ENST00000516211 KRI1Q8N9T8 703 aaKnown RBP4.68□□□□□ -1.66
SCARNA17.1-201ENST00000516211 ZBTB7CA1YPR0 619 aa4.67□□□□□ -1.66
SCARNA17.1-201ENST00000516211 CLEC11AQ9Y240 323 aa4.67□□□□□ -1.66
SCARNA17.1-201ENST00000516211 BARGINQ6ZT62 677 aa4.66□□□□□ -1.66
SCARNA17.1-201ENST00000516211 CREBZFQ9NS37 354 aa4.66□□□□□ -1.66
SCARNA17.1-201ENST00000516211 BICRAQ9NZM4 1560 aa4.65□□□□□ -1.66
SCARNA17.1-201ENST00000516211 CUX2O14529 1486 aa4.65□□□□□ -1.66
SCARNA17.1-201ENST00000516211 NLRP6P59044 892 aa4.65□□□□□ -1.67
SCARNA17.1-201ENST00000516211 TRIM26Q12899 539 aaPredicted RBP4.65□□□□□ -1.67
SCARNA17.1-201ENST00000516211 ARID3AQ99856 593 aa4.65□□□□□ -1.67
SCARNA17.1-201ENST00000516211 GPIHBP1Q8IV16 184 aa4.64□□□□□ -1.67
SCARNA17.1-201ENST00000516211 IL27Q8NEV9 243 aa4.64□□□□□ -1.67
SCARNA17.1-201ENST00000516211 CCDC9Q9Y3X0 531 aaKnown RBP4.64□□□□□ -1.67
SCARNA17.1-201ENST00000516211 PDIA4P13667 645 aaKnown RBP4.63□□□□□ -1.67
SCARNA17.1-201ENST00000516211 PDE4AP27815 886 aa4.63□□□□□ -1.67
SCARNA17.1-201ENST00000516211 FLIIQ13045 1269 aa4.63□□□□□ -1.67
SCARNA17.1-201ENST00000516211 RBM42Q9BTD8 480 aaKnown RBP4.63□□□□□ -1.67
SCARNA17.1-201ENST00000516211 SOX12O15370 315 aa4.62□□□□□ -1.67
SCARNA17.1-201ENST00000516211 PSEN1P49768 467 aa4.62□□□□□ -1.67
SCARNA17.1-201ENST00000516211 MNX1P50219 401 aaPredicted RBP4.62□□□□□ -1.67
SCARNA17.1-201ENST00000516211 AKT1S1Q96B36 256 aa4.62□□□□□ -1.67
SCARNA17.1-201ENST00000516211 MFRPQ9BY79 579 aa4.62□□□□□ -1.67
SCARNA17.1-201ENST00000516211 KDM4CQ9H3R0 1056 aa4.62□□□□□ -1.67
SCARNA17.1-201ENST00000516211 GPBP1L1Q9HC44 474 aaPredicted RBP4.61□□□□□ -1.67
SCARNA17.1-201ENST00000516211 DDX27Q96GQ7 796 aaKnown RBP4.6□□□□□ -1.67
SCARNA17.1-201ENST00000516211 LARP6Q9BRS8 491 aaKnown RBP4.6□□□□□ -1.67
SCARNA17.1-201ENST00000516211 ARIH1Q9Y4X5 557 aaPredicted RBP4.6□□□□□ -1.67
SCARNA17.1-201ENST00000516211 PDE4DQ08499 809 aa4.59□□□□□ -1.67
SCARNA17.1-201ENST00000516211 ZNF579Q8NAF0 562 aaKnown RBP4.59□□□□□ -1.67
SCARNA17.1-201ENST00000516211 DDRGK1Q96HY6 314 aa4.59□□□□□ -1.67
SCARNA17.1-201ENST00000516211 TSPYL2Q9H2G4 693 aaPredicted RBP4.59□□□□□ -1.67
SCARNA17.1-201ENST00000516211 UNC13AQ9UPW8 1703 aa4.58□□□□□ -1.68
SCARNA17.1-201ENST00000516211 APBB1O00213 710 aa4.58□□□□□ -1.68
SCARNA17.1-201ENST00000516211 RB1CC1Q8TDY2 1594 aa4.57□□□□□ -1.68
SCARNA17.1-201ENST00000516211 ZNF316A6NFI3 1004 aaPredicted RBP4.57□□□□□ -1.68
SCARNA17.1-201ENST00000516211 MFSD10Q14728 455 aa4.57□□□□□ -1.68
SCARNA17.1-201ENST00000516211 PCDHB8Q9UN66 801 aa4.57□□□□□ -1.68
SCARNA17.1-201ENST00000516211 PCDHB13Q9Y5F0 798 aa4.57□□□□□ -1.68
SCARNA17.1-201ENST00000516211 TRIM66O15016 1216 aa4.56□□□□□ -1.68
SCARNA17.1-201ENST00000516211 PPP1R37O75864 691 aa4.56□□□□□ -1.68
SCARNA17.1-201ENST00000516211 PAK3O75914 559 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms