RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
GYPB-215ENST00000513677 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
GYPB-215ENST00000513677 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
GYPB-215ENST00000513677 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
GYPB-215ENST00000513677 MIER1Q8N108 512 aa11.27□□□□□ -0.61
GYPB-215ENST00000513677 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
GYPB-215ENST00000513677 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
GYPB-215ENST00000513677 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
GYPB-215ENST00000513677 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
GYPB-215ENST00000513677 TRIM41Q8WV44 630 aa11.26□□□□□ -0.61
GYPB-215ENST00000513677 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
GYPB-215ENST00000513677 PEG3Q9GZU2 1588 aa11.21□□□□□ -0.61
GYPB-215ENST00000513677 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
GYPB-215ENST00000513677 PDS5BQ9NTI5 1447 aa11.2□□□□□ -0.62
GYPB-215ENST00000513677 POTEHQ6S545 545 aa11.15□□□□□ -0.62
GYPB-215ENST00000513677 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
GYPB-215ENST00000513677 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
GYPB-215ENST00000513677 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
GYPB-215ENST00000513677 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
GYPB-215ENST00000513677 WIZO95785 1651 aa11.13□□□□□ -0.63
GYPB-215ENST00000513677 CADPSQ9ULU8 1353 aa11.13□□□□□ -0.63
GYPB-215ENST00000513677 KLHL34Q8N239 644 aa11.12□□□□□ -0.63
GYPB-215ENST00000513677 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
GYPB-215ENST00000513677 WDR62O43379 1518 aa11.09□□□□□ -0.63
GYPB-215ENST00000513677 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
GYPB-215ENST00000513677 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
GYPB-215ENST00000513677 FANCD2Q9BXW9 1451 aa11.04□□□□□ -0.64
GYPB-215ENST00000513677 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
GYPB-215ENST00000513677 NUBP1P53384 320 aa10.98□□□□□ -0.65
GYPB-215ENST00000513677 HAX1O00165 279 aa10.96□□□□□ -0.65
GYPB-215ENST00000513677 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
GYPB-215ENST00000513677 CFTRP13569 1480 aa10.95□□□□□ -0.66
GYPB-215ENST00000513677 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
GYPB-215ENST00000513677 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
GYPB-215ENST00000513677 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
GYPB-215ENST00000513677 TOP2AP11388 1531 aaKnown RBP10.93□□□□□ -0.66
GYPB-215ENST00000513677 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
GYPB-215ENST00000513677 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
GYPB-215ENST00000513677 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
GYPB-215ENST00000513677 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
GYPB-215ENST00000513677 RIMBP3CA6NJZ7 1639 aa10.9□□□□□ -0.66
GYPB-215ENST00000513677 RIMBP3BA6NNM3 1639 aa10.9□□□□□ -0.66
GYPB-215ENST00000513677 RIMBP3Q9UFD9 1639 aa10.9□□□□□ -0.66
GYPB-215ENST00000513677 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
GYPB-215ENST00000513677 PRDM2Q13029 1718 aa10.88□□□□□ -0.67
GYPB-215ENST00000513677 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
GYPB-215ENST00000513677 EVX2Q03828 476 aa10.87□□□□□ -0.67
GYPB-215ENST00000513677 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
GYPB-215ENST00000513677 ZNF608Q9ULD9 1512 aaPredicted RBP10.87□□□□□ -0.67
GYPB-215ENST00000513677 GSE1Q14687 1217 aa10.84□□□□□ -0.67
GYPB-215ENST00000513677 IFT140Q96RY7 1462 aa10.83□□□□□ -0.68
GYPB-215ENST00000513677 ARHGEF11O15085 1522 aa10.82□□□□□ -0.68
GYPB-215ENST00000513677 CCDC88BA6NC98 1476 aa10.81□□□□□ -0.68
GYPB-215ENST00000513677 CCDC61Q9Y6R9 512 aa10.81□□□□□ -0.68
GYPB-215ENST00000513677 TOPBP1Q92547 1522 aa10.8□□□□□ -0.68
GYPB-215ENST00000513677 CYB5RLQ6IPT4 315 aa10.8□□□□□ -0.68
GYPB-215ENST00000513677 EIF4G3O43432 1585 aaKnown RBP10.8□□□□□ -0.68
GYPB-215ENST00000513677 CHD1O14646 1710 aa10.78□□□□□ -0.68
GYPB-215ENST00000513677 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
GYPB-215ENST00000513677 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
GYPB-215ENST00000513677 PYGBP11216 843 aa10.76□□□□□ -0.69
GYPB-215ENST00000513677 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
GYPB-215ENST00000513677 DNMBPQ6XZF7 1577 aa10.74□□□□□ -0.69
GYPB-215ENST00000513677 PKD2Q13563 968 aa10.74□□□□□ -0.69
GYPB-215ENST00000513677 AMER1Q5JTC6 1135 aaPredicted RBP10.74□□□□□ -0.69
GYPB-215ENST00000513677 ABCC8Q09428 1581 aa10.73□□□□□ -0.69
GYPB-215ENST00000513677 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
GYPB-215ENST00000513677 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
GYPB-215ENST00000513677 TARBP1Q13395 1621 aaKnown RBP10.71□□□□□ -0.69
GYPB-215ENST00000513677 ARAP1Q96P48 1450 aa10.7□□□□□ -0.7
GYPB-215ENST00000513677 SP7Q8TDD2 431 aaPredicted RBP10.7□□□□□ -0.7
GYPB-215ENST00000513677 KIF12Q96FN5 646 aa10.7□□□□□ -0.7
GYPB-215ENST00000513677 MAP3K13O43283 966 aa10.69□□□□□ -0.7
GYPB-215ENST00000513677 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
GYPB-215ENST00000513677 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
GYPB-215ENST00000513677 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
GYPB-215ENST00000513677 CHRM1P11229 460 aaPredicted RBP10.67□□□□□ -0.7
GYPB-215ENST00000513677 PCDHB13Q9Y5F0 798 aa10.66□□□□□ -0.7
GYPB-215ENST00000513677 GABBR2O75899 941 aa10.65□□□□□ -0.7
GYPB-215ENST00000513677 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.7
GYPB-215ENST00000513677 SNAPC4Q5SXM2 1469 aa10.64□□□□□ -0.71
GYPB-215ENST00000513677 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
GYPB-215ENST00000513677 SOGA1O94964 1423 aa10.64□□□□□ -0.71
GYPB-215ENST00000513677 CLCN6P51797 869 aa10.63□□□□□ -0.71
GYPB-215ENST00000513677 CHMP7Q8WUX9 453 aaPredicted RBP10.62□□□□□ -0.71
GYPB-215ENST00000513677 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
GYPB-215ENST00000513677 IFNL1Q8IU54 200 aa10.61□□□□□ -0.71
GYPB-215ENST00000513677 RNF25Q96BH1 459 aaPredicted RBP10.61□□□□□ -0.71
GYPB-215ENST00000513677 PCDHB8Q9UN66 801 aa10.61□□□□□ -0.71
GYPB-215ENST00000513677 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
GYPB-215ENST00000513677 RGL2O15211 777 aa10.6□□□□□ -0.71
GYPB-215ENST00000513677 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
GYPB-215ENST00000513677 SYNJ1O43426 1573 aa10.59□□□□□ -0.71
GYPB-215ENST00000513677 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
GYPB-215ENST00000513677 TRPC6Q9Y210 931 aa10.57□□□□□ -0.72
GYPB-215ENST00000513677 RIOK3O14730 519 aaKnown RBP10.56□□□□□ -0.72
GYPB-215ENST00000513677 CUX1P39880 1505 aa10.56□□□□□ -0.72
GYPB-215ENST00000513677 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
GYPB-215ENST00000513677 PBRM1Q86U86 1689 aa10.55□□□□□ -0.72
GYPB-215ENST00000513677 MAGI1Q96QZ7 1491 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms