RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 LCE2DQ5TA82 110 aaPredicted RBP7.9□□□□□ -1.14
MATR3-219ENST00000512040 ZNF692Q9BU19 519 aaPredicted RBP7.86□□□□□ -1.15
MATR3-219ENST00000512040 ERICH6Q7L0X2 663 aa7.85□□□□□ -1.15
MATR3-219ENST00000512040 SPDYE2BA6NHP3 402 aa7.84□□□□□ -1.15
MATR3-219ENST00000512040 SPDYE6P0CI01 402 aa7.84□□□□□ -1.15
MATR3-219ENST00000512040 SPDYE2Q495Y8 402 aa7.84□□□□□ -1.15
MATR3-219ENST00000512040 AMER1Q5JTC6 1135 aaPredicted RBP7.83□□□□□ -1.16
MATR3-219ENST00000512040 DNAJC5Q9H3Z4 198 aa7.83□□□□□ -1.16
MATR3-219ENST00000512040 CDAN1Q8IWY9 1227 aa7.82□□□□□ -1.16
MATR3-219ENST00000512040 RTN4Q9NQC3 1192 aaKnown RBP7.82□□□□□ -1.16
MATR3-219ENST00000512040 FAM163AQ96GL9 167 aaPredicted RBP7.81□□□□□ -1.16
MATR3-219ENST00000512040 PROM2Q8N271 834 aa7.8□□□□□ -1.16
MATR3-219ENST00000512040 SSUH2Q9Y2M2 353 aa7.79□□□□□ -1.16
MATR3-219ENST00000512040 MMRN1Q13201 1228 aa7.78□□□□□ -1.16
MATR3-219ENST00000512040 ARXQ96QS3 562 aa7.77□□□□□ -1.17
MATR3-219ENST00000512040 FBXO3Q9UK99 471 aa7.75□□□□□ -1.17
MATR3-219ENST00000512040 CUX2O14529 1486 aa7.71□□□□□ -1.18
MATR3-219ENST00000512040 CD44P16070 742 aaKnown RBP7.71□□□□□ -1.18
MATR3-219ENST00000512040 THOC2Q8NI27 1593 aaKnown RBP7.69□□□□□ -1.18
MATR3-219ENST00000512040 PRKCSHP14314 528 aaPredicted RBP7.69□□□□□ -1.18
MATR3-219ENST00000512040 NESP48681 1621 aa7.69□□□□□ -1.18
MATR3-219ENST00000512040 MAMSTRQ6ZN01 415 aa7.68□□□□□ -1.18
MATR3-219ENST00000512040 SPDYE1Q8NFV5 336 aaPredicted RBP7.68□□□□□ -1.18
MATR3-219ENST00000512040 CLEC11AQ9Y240 323 aa7.67□□□□□ -1.18
MATR3-219ENST00000512040 VASPP50552 380 aaPredicted RBP7.66□□□□□ -1.18
MATR3-219ENST00000512040 SPNS2Q8IVW8 549 aa7.66□□□□□ -1.18
MATR3-219ENST00000512040 NCAPD3P42695 1498 aa7.66□□□□□ -1.18
MATR3-219ENST00000512040 SMARCA4P51532 1647 aa7.65□□□□□ -1.18
MATR3-219ENST00000512040 ATAD2BQ9ULI0 1458 aa7.65□□□□□ -1.18
MATR3-219ENST00000512040 KIF21AQ7Z4S6 1674 aa7.63□□□□□ -1.19
MATR3-219ENST00000512040 HMGXB3Q12766 1538 aa7.63□□□□□ -1.19
MATR3-219ENST00000512040 ERCC6Q03468 1493 aa7.63□□□□□ -1.19
MATR3-219ENST00000512040 CHADLQ6NUI6 762 aa7.63□□□□□ -1.19
MATR3-219ENST00000512040 STAG3Q9UJ98 1225 aa7.61□□□□□ -1.19
MATR3-219ENST00000512040 SMARCA2P51531 1590 aa7.59□□□□□ -1.2
MATR3-219ENST00000512040 POTEJP0CG39 1038 aa7.58□□□□□ -1.2
MATR3-219ENST00000512040 PEG3Q9GZU2 1588 aa7.58□□□□□ -1.2
MATR3-219ENST00000512040 IFNLR1Q8IU57 520 aaPredicted RBP7.56□□□□□ -1.2
MATR3-219ENST00000512040 PLCD3Q8N3E9 789 aa7.56□□□□□ -1.2
MATR3-219ENST00000512040 ZNF579Q8NAF0 562 aaKnown RBP7.56□□□□□ -1.2
MATR3-219ENST00000512040 MIER1Q8N108 512 aa7.55□□□□□ -1.2
MATR3-219ENST00000512040 LAMC3Q9Y6N6 1575 aa7.54□□□□□ -1.2
MATR3-219ENST00000512040 KLHL34Q8N239 644 aa7.53□□□□□ -1.2
MATR3-219ENST00000512040 SCUBE2Q9NQ36 999 aa7.53□□□□□ -1.2
MATR3-219ENST00000512040 BAZ1BQ9UIG0 1483 aaKnown RBP7.53□□□□□ -1.2
MATR3-219ENST00000512040 MROH2BQ7Z745 1585 aa7.53□□□□□ -1.2
MATR3-219ENST00000512040 BAZ1AQ9NRL2 1556 aaPredicted RBP7.52□□□□□ -1.21
MATR3-219ENST00000512040 PRR29P0C7W0 189 aa7.52□□□□□ -1.21
MATR3-219ENST00000512040 RANGAP1P46060 587 aaPredicted RBP7.51□□□□□ -1.21
MATR3-219ENST00000512040 GALR2O43603 387 aaPredicted RBP7.5□□□□□ -1.21
MATR3-219ENST00000512040 PLEKHG5O94827 1062 aa7.49□□□□□ -1.21
MATR3-219ENST00000512040 WDR62O43379 1518 aa7.47□□□□□ -1.21
MATR3-219ENST00000512040 METRNQ9UJH8 293 aa7.46□□□□□ -1.22
MATR3-219ENST00000512040 WIZO95785 1651 aa7.46□□□□□ -1.22
MATR3-219ENST00000512040 HOMEZQ8IX15 550 aa7.45□□□□□ -1.22
MATR3-219ENST00000512040 SPOCK2Q92563 424 aa7.45□□□□□ -1.22
MATR3-219ENST00000512040 FARP1Q9Y4F1 1045 aaPredicted RBP7.45□□□□□ -1.22
MATR3-219ENST00000512040 C7P10643 843 aa7.44□□□□□ -1.22
MATR3-219ENST00000512040 CREBZFQ9NS37 354 aa7.44□□□□□ -1.22
MATR3-219ENST00000512040 TIMELESSQ9UNS1 1208 aa7.44□□□□□ -1.22
MATR3-219ENST00000512040 MRC2Q9UBG0 1479 aa7.43□□□□□ -1.22
MATR3-219ENST00000512040 TRIM41Q8WV44 630 aa7.42□□□□□ -1.22
MATR3-219ENST00000512040 SLC39A7Q92504 469 aa7.42□□□□□ -1.22
MATR3-219ENST00000512040 ZBTB47Q9UFB7 747 aaPredicted RBP7.42□□□□□ -1.22
MATR3-219ENST00000512040 ZRANB1Q9UGI0 708 aa7.4□□□□□ -1.22
MATR3-219ENST00000512040 PDS5BQ9NTI5 1447 aa7.4□□□□□ -1.22
MATR3-219ENST00000512040 CADPSQ9ULU8 1353 aa7.38□□□□□ -1.23
MATR3-219ENST00000512040 URB2Q14146 1524 aaKnown RBP7.37□□□□□ -1.23
MATR3-219ENST00000512040 MNX1P50219 401 aaPredicted RBP7.36□□□□□ -1.23
MATR3-219ENST00000512040 TAOK2Q9UL54 1235 aa7.36□□□□□ -1.23
MATR3-219ENST00000512040 RIMBP3CA6NJZ7 1639 aa7.36□□□□□ -1.23
MATR3-219ENST00000512040 RIMBP3BA6NNM3 1639 aa7.36□□□□□ -1.23
MATR3-219ENST00000512040 RIMBP3Q9UFD9 1639 aa7.36□□□□□ -1.23
MATR3-219ENST00000512040 CEP164Q9UPV0 1460 aa7.36□□□□□ -1.23
MATR3-219ENST00000512040 CIZ1Q9ULV3 898 aaPredicted RBP7.35□□□□□ -1.23
MATR3-219ENST00000512040 FANCD2Q9BXW9 1451 aa7.35□□□□□ -1.23
MATR3-219ENST00000512040 PRDM2Q13029 1718 aa7.35□□□□□ -1.23
MATR3-219ENST00000512040 PKD2Q13563 968 aa7.34□□□□□ -1.23
MATR3-219ENST00000512040 BCANQ96GW7 911 aa7.34□□□□□ -1.23
MATR3-219ENST00000512040 ST18O60284 1047 aa7.33□□□□□ -1.24
MATR3-219ENST00000512040 CFTRP13569 1480 aa7.32□□□□□ -1.24
MATR3-219ENST00000512040 EIF5BO60841 1220 aaKnown RBP7.32□□□□□ -1.24
MATR3-219ENST00000512040 NUBP1P53384 320 aa7.32□□□□□ -1.24
MATR3-219ENST00000512040 TULP1O00294 542 aaPredicted RBP7.31□□□□□ -1.24
MATR3-219ENST00000512040 ECM2O94769 699 aaPredicted RBP7.31□□□□□ -1.24
MATR3-219ENST00000512040 NPM1P06748 294 aaKnown RBP eCLIP7.31□□□□□ -1.24
MATR3-219ENST00000512040 ASTLQ6HA08 431 aaPredicted RBP7.31□□□□□ -1.24
MATR3-219ENST00000512040 DCAF8Q5TAQ9 597 aa7.3□□□□□ -1.24
MATR3-219ENST00000512040 TOP2AP11388 1531 aaKnown RBP7.3□□□□□ -1.24
MATR3-219ENST00000512040 ZNF608Q9ULD9 1512 aaPredicted RBP7.3□□□□□ -1.24
MATR3-219ENST00000512040 RASEFQ8IZ41 740 aa7.29□□□□□ -1.24
MATR3-219ENST00000512040 EIF4G3O43432 1585 aaKnown RBP7.29□□□□□ -1.24
MATR3-219ENST00000512040 ARHGEF11O15085 1522 aa7.28□□□□□ -1.24
MATR3-219ENST00000512040 FAM212AQ96EL1 285 aa7.28□□□□□ -1.24
MATR3-219ENST00000512040 CHD1O14646 1710 aa7.27□□□□□ -1.25
MATR3-219ENST00000512040 GSE1Q14687 1217 aa7.27□□□□□ -1.25
MATR3-219ENST00000512040 RSF1Q96T23 1441 aaPredicted RBP7.26□□□□□ -1.25
MATR3-219ENST00000512040 ATMINO43313 823 aaPredicted RBP7.25□□□□□ -1.25
MATR3-219ENST00000512040 TSPYL2Q9H2G4 693 aaPredicted RBP7.24□□□□□ -1.25
MATR3-219ENST00000512040 TARBP1Q13395 1621 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms