RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 REM2Q8IYK8 340 aaPredicted RBP8.57□□□□□ -1.04
CALCOCO2-213ENST00000509112 RTN4Q9NQC3 1192 aaKnown RBP8.57□□□□□ -1.04
CALCOCO2-213ENST00000509112 WDR62O43379 1518 aa8.56□□□□□ -1.04
CALCOCO2-213ENST00000509112 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
CALCOCO2-213ENST00000509112 CADPSQ9ULU8 1353 aa8.56□□□□□ -1.04
CALCOCO2-213ENST00000509112 MROH2BQ7Z745 1585 aa8.56□□□□□ -1.04
CALCOCO2-213ENST00000509112 PLEKHG5O94827 1062 aa8.55□□□□□ -1.04
CALCOCO2-213ENST00000509112 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
CALCOCO2-213ENST00000509112 MRC2Q9UBG0 1479 aa8.55□□□□□ -1.04
CALCOCO2-213ENST00000509112 PLCD3Q8N3E9 789 aa8.51□□□□□ -1.05
CALCOCO2-213ENST00000509112 MIER1Q8N108 512 aa8.5□□□□□ -1.05
CALCOCO2-213ENST00000509112 SPOCK2Q92563 424 aa8.48□□□□□ -1.05
CALCOCO2-213ENST00000509112 CEP164Q9UPV0 1460 aa8.48□□□□□ -1.05
CALCOCO2-213ENST00000509112 PRR29P0C7W0 189 aa8.47□□□□□ -1.05
CALCOCO2-213ENST00000509112 KLHL34Q8N239 644 aa8.45□□□□□ -1.06
CALCOCO2-213ENST00000509112 TRIM41Q8WV44 630 aa8.45□□□□□ -1.06
CALCOCO2-213ENST00000509112 WIZO95785 1651 aa8.45□□□□□ -1.06
CALCOCO2-213ENST00000509112 CFTRP13569 1480 aa8.45□□□□□ -1.06
CALCOCO2-213ENST00000509112 PITPNM1O00562 1244 aa8.44□□□□□ -1.06
CALCOCO2-213ENST00000509112 CLEC11AQ9Y240 323 aa8.44□□□□□ -1.06
CALCOCO2-213ENST00000509112 FANCD2Q9BXW9 1451 aa8.44□□□□□ -1.06
CALCOCO2-213ENST00000509112 PRDM2Q13029 1718 aa8.41□□□□□ -1.06
CALCOCO2-213ENST00000509112 CREBZFQ9NS37 354 aa8.39□□□□□ -1.07
CALCOCO2-213ENST00000509112 TOP2AP11388 1531 aaKnown RBP8.38□□□□□ -1.07
CALCOCO2-213ENST00000509112 URB2Q14146 1524 aaKnown RBP8.38□□□□□ -1.07
CALCOCO2-213ENST00000509112 MNX1P50219 401 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO2-213ENST00000509112 PKD2Q13563 968 aa8.35□□□□□ -1.07
CALCOCO2-213ENST00000509112 RIMBP3CA6NJZ7 1639 aa8.35□□□□□ -1.07
CALCOCO2-213ENST00000509112 RIMBP3BA6NNM3 1639 aa8.35□□□□□ -1.07
CALCOCO2-213ENST00000509112 RIMBP3Q9UFD9 1639 aa8.35□□□□□ -1.07
CALCOCO2-213ENST00000509112 IFT140Q96RY7 1462 aa8.33□□□□□ -1.08
CALCOCO2-213ENST00000509112 NPM1P06748 294 aaKnown RBP eCLIP8.33□□□□□ -1.08
CALCOCO2-213ENST00000509112 RSF1Q96T23 1441 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-213ENST00000509112 FXR2P51116 673 aaKnown RBP eCLIP8.32□□□□□ -1.08
CALCOCO2-213ENST00000509112 GSE1Q14687 1217 aa8.32□□□□□ -1.08
CALCOCO2-213ENST00000509112 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
CALCOCO2-213ENST00000509112 ARHGEF11O15085 1522 aa8.3□□□□□ -1.08
CALCOCO2-213ENST00000509112 NUBP1P53384 320 aa8.3□□□□□ -1.08
CALCOCO2-213ENST00000509112 CHRDL2Q6WN34 429 aa8.3□□□□□ -1.08
CALCOCO2-213ENST00000509112 TOPBP1Q92547 1522 aa8.28□□□□□ -1.08
CALCOCO2-213ENST00000509112 ZNF608Q9ULD9 1512 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-213ENST00000509112 EIF4G3O43432 1585 aaKnown RBP8.27□□□□□ -1.09
CALCOCO2-213ENST00000509112 FAM212AQ96EL1 285 aa8.26□□□□□ -1.09
CALCOCO2-213ENST00000509112 DNMBPQ6XZF7 1577 aa8.26□□□□□ -1.09
CALCOCO2-213ENST00000509112 ECM2O94769 699 aaPredicted RBP8.25□□□□□ -1.09
CALCOCO2-213ENST00000509112 FARP1Q9Y4F1 1045 aaPredicted RBP8.24□□□□□ -1.09
CALCOCO2-213ENST00000509112 WDR97A6NE52 1622 aa8.24□□□□□ -1.09
CALCOCO2-213ENST00000509112 TARBP1Q13395 1621 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-213ENST00000509112 CCDC88BA6NC98 1476 aa8.24□□□□□ -1.09
CALCOCO2-213ENST00000509112 CHD1O14646 1710 aa8.23□□□□□ -1.09
CALCOCO2-213ENST00000509112 CHRM1P11229 460 aaPredicted RBP8.23□□□□□ -1.09
CALCOCO2-213ENST00000509112 PRKAR2AP13861 404 aaKnown RBP8.23□□□□□ -1.09
CALCOCO2-213ENST00000509112 CIZ1Q9ULV3 898 aaPredicted RBP8.23□□□□□ -1.09
CALCOCO2-213ENST00000509112 ARAP1Q96P48 1450 aa8.2□□□□□ -1.1
CALCOCO2-213ENST00000509112 PIP4P2Q8N4L2 257 aa8.2□□□□□ -1.1
CALCOCO2-213ENST00000509112 DCAF8Q5TAQ9 597 aa8.19□□□□□ -1.1
CALCOCO2-213ENST00000509112 CHADLQ6NUI6 762 aa8.19□□□□□ -1.1
CALCOCO2-213ENST00000509112 RASEFQ8IZ41 740 aa8.19□□□□□ -1.1
CALCOCO2-213ENST00000509112 TAOK2Q9UL54 1235 aa8.19□□□□□ -1.1
CALCOCO2-213ENST00000509112 POLA1P09884 1462 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-213ENST00000509112 CYB5RLQ6IPT4 315 aa8.17□□□□□ -1.1
CALCOCO2-213ENST00000509112 AQRO60306 1485 aaKnown RBP eCLIP8.16□□□□□ -1.13e-6■■■□□ 17.9
CALCOCO2-213ENST00000509112 CLASP1Q7Z460 1538 aa8.16□□□□□ -1.1
CALCOCO2-213ENST00000509112 SYNJ1O43426 1573 aa8.14□□□□□ -1.11
CALCOCO2-213ENST00000509112 MAGI1Q96QZ7 1491 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-213ENST00000509112 RGL2O15211 777 aa8.13□□□□□ -1.11
CALCOCO2-213ENST00000509112 PAK3O75914 559 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-213ENST00000509112 SOGA1O94964 1423 aa8.12□□□□□ -1.11
CALCOCO2-213ENST00000509112 SGIP1Q9BQI5 828 aa8.11□□□□□ -1.11
CALCOCO2-213ENST00000509112 RIOK3O14730 519 aaKnown RBP8.1□□□□□ -1.11
CALCOCO2-213ENST00000509112 SNAPC4Q5SXM2 1469 aa8.1□□□□□ -1.11
CALCOCO2-213ENST00000509112 SYNJ2O15056 1496 aa8.09□□□□□ -1.11
CALCOCO2-213ENST00000509112 GRIN2BQ13224 1484 aa8.09□□□□□ -1.11
CALCOCO2-213ENST00000509112 RAD54L2Q9Y4B4 1467 aa8.09□□□□□ -1.11
CALCOCO2-213ENST00000509112 SLC24A1O60721 1099 aa8.09□□□□□ -1.11
CALCOCO2-213ENST00000509112 BBXQ8WY36 941 aaPredicted RBP8.09□□□□□ -1.11
CALCOCO2-213ENST00000509112 CCDC61Q9Y6R9 512 aa8.09□□□□□ -1.11
CALCOCO2-213ENST00000509112 FGD5Q6ZNL6 1462 aa8.08□□□□□ -1.12
CALCOCO2-213ENST00000509112 RNF25Q96BH1 459 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-213ENST00000509112 TDRD9Q8NDG6 1382 aaKnown RBP8.08□□□□□ -1.12
CALCOCO2-213ENST00000509112 VGFO15240 615 aaPredicted RBP8.07□□□□□ -1.12
CALCOCO2-213ENST00000509112 ZNF467Q7Z7K2 595 aaPredicted RBP8.07□□□□□ -1.12
CALCOCO2-213ENST00000509112 HS6ST3Q8IZP7 471 aa8.07□□□□□ -1.12
CALCOCO2-213ENST00000509112 PBRM1Q86U86 1689 aa8.07□□□□□ -1.12
CALCOCO2-213ENST00000509112 CUX1P39880 1505 aa8.06□□□□□ -1.12
CALCOCO2-213ENST00000509112 CHMP7Q8WUX9 453 aaPredicted RBP8.05□□□□□ -1.12
CALCOCO2-213ENST00000509112 TSPYL2Q9H2G4 693 aaPredicted RBP8.05□□□□□ -1.12
CALCOCO2-213ENST00000509112 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.05□□□□□ -1.12
CALCOCO2-213ENST00000509112 ABCA5Q8WWZ7 1642 aa8.04□□□□□ -1.12
CALCOCO2-213ENST00000509112 PLCB2Q00722 1185 aa8.04□□□□□ -1.12
CALCOCO2-213ENST00000509112 GAPVD1Q14C86 1478 aa8.04□□□□□ -1.12
CALCOCO2-213ENST00000509112 ABCA10Q8WWZ4 1543 aa8.03□□□□□ -1.12
CALCOCO2-213ENST00000509112 PYGBP11216 843 aa8.03□□□□□ -1.12
CALCOCO2-213ENST00000509112 CLCN6P51797 869 aa8.03□□□□□ -1.12
CALCOCO2-213ENST00000509112 ZNF579Q8NAF0 562 aaKnown RBP8.03□□□□□ -1.12
CALCOCO2-213ENST00000509112 C19orf67A6NJJ6 358 aa8.02□□□□□ -1.13
CALCOCO2-213ENST00000509112 CD44P16070 742 aaKnown RBP8.01□□□□□ -1.13
CALCOCO2-213ENST00000509112 CHGAP10645 457 aaKnown RBP8□□□□□ -1.13
CALCOCO2-213ENST00000509112 SHROOM2Q13796 1616 aa8□□□□□ -1.13
CALCOCO2-213ENST00000509112 NUP160Q12769 1436 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms