RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 UBTFP17480 764 aaKnown RBP6.37□□□□□ -1.39
HMGB1P22-201ENST00000505315 GTPBP6O43824 516 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P22-201ENST00000505315 ZNF692Q9BU19 519 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P22-201ENST00000505315 WDR70Q9NW82 654 aa6.36□□□□□ -1.39
HMGB1P22-201ENST00000505315 TRIM26Q12899 539 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P22-201ENST00000505315 NKX1-1Q15270 411 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P22-201ENST00000505315 STK25O00506 426 aa6.34□□□□□ -1.39
HMGB1P22-201ENST00000505315 ZBTB12Q9Y330 459 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P22-201ENST00000505315 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB1P22-201ENST00000505315 ARID3AQ99856 593 aa6.33□□□□□ -1.4
HMGB1P22-201ENST00000505315 CAPN15O75808 1086 aa6.32□□□□□ -1.4
HMGB1P22-201ENST00000505315 GSE1Q14687 1217 aa6.31□□□□□ -1.4
HMGB1P22-201ENST00000505315 RIOK3O14730 519 aaKnown RBP6.3□□□□□ -1.4
HMGB1P22-201ENST00000505315 RNF25Q96BH1 459 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P22-201ENST00000505315 RYDENQ9NUL5 291 aaKnown RBP6.3□□□□□ -1.4
HMGB1P22-201ENST00000505315 DCAF8Q5TAQ9 597 aa6.29□□□□□ -1.4
HMGB1P22-201ENST00000505315 PABPN1Q86U42 306 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB1P22-201ENST00000505315 SPINK5Q9NQ38 1064 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P22-201ENST00000505315 SLC24A3Q9HC58 644 aa6.28□□□□□ -1.4
HMGB1P22-201ENST00000505315 STK24Q9Y6E0 443 aa6.27□□□□□ -1.41
HMGB1P22-201ENST00000505315 KCNV2Q8TDN2 545 aa6.26□□□□□ -1.41
HMGB1P22-201ENST00000505315 ZMYND15Q9H091 742 aa6.26□□□□□ -1.41
HMGB1P22-201ENST00000505315 RSPH6AQ9H0K4 717 aa6.26□□□□□ -1.41
HMGB1P22-201ENST00000505315 VGFO15240 615 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P22-201ENST00000505315 ABCB7O75027 752 aa6.25□□□□□ -1.41
HMGB1P22-201ENST00000505315 ZC3H15Q8WU90 426 aaKnown RBP6.25□□□□□ -1.41
HMGB1P22-201ENST00000505315 HRCP23327 699 aa6.23□□□□□ -1.41
HMGB1P22-201ENST00000505315 BCL11BQ9C0K0 894 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P22-201ENST00000505315 ZBTB7CA1YPR0 619 aa6.21□□□□□ -1.42
HMGB1P22-201ENST00000505315 SPDYE2BA6NHP3 402 aa6.2□□□□□ -1.42
HMGB1P22-201ENST00000505315 SPDYE6P0CI01 402 aa6.2□□□□□ -1.42
HMGB1P22-201ENST00000505315 SPDYE2Q495Y8 402 aa6.2□□□□□ -1.42
HMGB1P22-201ENST00000505315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P22-201ENST00000505315 OSCARQ8IYS5 282 aa6.18□□□□□ -1.42
HMGB1P22-201ENST00000505315 ZFP91Q96JP5 570 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P22-201ENST00000505315 CCDC9Q9Y3X0 531 aaKnown RBP6.18□□□□□ -1.42
HMGB1P22-201ENST00000505315 PDIA4P13667 645 aaKnown RBP6.17□□□□□ -1.42
HMGB1P22-201ENST00000505315 IL27Q8NEV9 243 aa6.17□□□□□ -1.42
HMGB1P22-201ENST00000505315 SSUH2Q9Y2M2 353 aa6.17□□□□□ -1.42
HMGB1P22-201ENST00000505315 CADPS2Q86UW7 1296 aa6.15□□□□□ -1.42
HMGB1P22-201ENST00000505315 FAM212AQ96EL1 285 aa6.15□□□□□ -1.42
HMGB1P22-201ENST00000505315 SEMA3EO15041 775 aa6.14□□□□□ -1.43
HMGB1P22-201ENST00000505315 KRI1Q8N9T8 703 aaKnown RBP6.14□□□□□ -1.43
HMGB1P22-201ENST00000505315 ARID3CA6NKF2 412 aa6.13□□□□□ -1.43
HMGB1P22-201ENST00000505315 NUBP1P53384 320 aa6.13□□□□□ -1.43
HMGB1P22-201ENST00000505315 SMYD5Q6GMV2 418 aa6.13□□□□□ -1.43
HMGB1P22-201ENST00000505315 ARHGEF1Q92888 912 aaKnown RBP6.13□□□□□ -1.43
HMGB1P22-201ENST00000505315 APBB1O00213 710 aa6.12□□□□□ -1.43
HMGB1P22-201ENST00000505315 GPBP1L1Q9HC44 474 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P22-201ENST00000505315 ZMYND10O75800 440 aa6.1□□□□□ -1.43
HMGB1P22-201ENST00000505315 E2F4Q16254 413 aa6.1□□□□□ -1.43
HMGB1P22-201ENST00000505315 TESPA1A2RU30 521 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P22-201ENST00000505315 AK7Q96M32 723 aa6.09□□□□□ -1.43
HMGB1P22-201ENST00000505315 SGIP1Q9BQI5 828 aa6.09□□□□□ -1.43
HMGB1P22-201ENST00000505315 PYGBP11216 843 aa6.07□□□□□ -1.44
HMGB1P22-201ENST00000505315 C1orf115Q9H7X2 142 aa6.07□□□□□ -1.44
HMGB1P22-201ENST00000505315 CHRM1P11229 460 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P22-201ENST00000505315 BARGINQ6ZT62 677 aa6.06□□□□□ -1.44
HMGB1P22-201ENST00000505315 KDM4CQ9H3R0 1056 aa6.06□□□□□ -1.44
HMGB1P22-201ENST00000505315 MKRN3Q13064 507 aaKnown RBP6.03□□□□□ -1.44
HMGB1P22-201ENST00000505315 ZNF316A6NFI3 1004 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P22-201ENST00000505315 GPIHBP1Q8IV16 184 aa6.01□□□□□ -1.45
HMGB1P22-201ENST00000505315 FLIIQ13045 1269 aa6□□□□□ -1.45
HMGB1P22-201ENST00000505315 RASEFQ8IZ41 740 aa6□□□□□ -1.45
HMGB1P22-201ENST00000505315 KCTD17Q8N5Z5 321 aa6□□□□□ -1.45
HMGB1P22-201ENST00000505315 NECTIN2Q92692 538 aa6□□□□□ -1.45
HMGB1P22-201ENST00000505315 PDE4DQ08499 809 aa5.99□□□□□ -1.45
HMGB1P22-201ENST00000505315 RBM26Q5T8P6 1007 aaKnown RBP5.99□□□□□ -1.45
HMGB1P22-201ENST00000505315 AEBP1Q8IUX7 1158 aa5.99□□□□□ -1.45
HMGB1P22-201ENST00000505315 CCDC82Q8N4S0 544 aa5.99□□□□□ -1.45
HMGB1P22-201ENST00000505315 RAD21O60216 631 aa5.98□□□□□ -1.45
HMGB1P22-201ENST00000505315 TRIM66O15016 1216 aa5.97□□□□□ -1.45
HMGB1P22-201ENST00000505315 LARP6Q9BRS8 491 aaKnown RBP5.97□□□□□ -1.45
HMGB1P22-201ENST00000505315 RNF39Q9H2S5 420 aa5.97□□□□□ -1.45
HMGB1P22-201ENST00000505315 ZNF467Q7Z7K2 595 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P22-201ENST00000505315 FAM117AQ9C073 453 aa5.96□□□□□ -1.46
HMGB1P22-201ENST00000505315 C1QBPQ07021 282 aaKnown RBP5.95□□□□□ -1.46
HMGB1P22-201ENST00000505315 PDAP1Q13442 181 aaKnown RBP5.95□□□□□ -1.46
HMGB1P22-201ENST00000505315 MFRPQ9BY79 579 aa5.95□□□□□ -1.46
HMGB1P22-201ENST00000505315 PPP1R37O75864 691 aa5.94□□□□□ -1.46
HMGB1P22-201ENST00000505315 CLEC11AQ9Y240 323 aa5.94□□□□□ -1.46
HMGB1P22-201ENST00000505315 PRR29P0C7W0 189 aa5.93□□□□□ -1.46
HMGB1P22-201ENST00000505315 CLUAP1Q96AJ1 413 aa5.93□□□□□ -1.46
HMGB1P22-201ENST00000505315 DDRGK1Q96HY6 314 aa5.93□□□□□ -1.46
HMGB1P22-201ENST00000505315 ATP1B4Q9UN42 357 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P22-201ENST00000505315 TRAK2O60296 914 aa5.92□□□□□ -1.46
HMGB1P22-201ENST00000505315 PDE4AP27815 886 aa5.92□□□□□ -1.46
HMGB1P22-201ENST00000505315 DSG3P32926 999 aa5.92□□□□□ -1.46
HMGB1P22-201ENST00000505315 CCDC97Q96F63 343 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P22-201ENST00000505315 NLRP6P59044 892 aa5.91□□□□□ -1.46
HMGB1P22-201ENST00000505315 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
HMGB1P22-201ENST00000505315 SPDYE1Q8NFV5 336 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P22-201ENST00000505315 CREBZFQ9NS37 354 aa5.91□□□□□ -1.46
HMGB1P22-201ENST00000505315 ZNF777Q9ULD5 760 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P22-201ENST00000505315 MLLT3P42568 568 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P22-201ENST00000505315 RBM25P49756 843 aaKnown RBP5.9□□□□□ -1.46
HMGB1P22-201ENST00000505315 PCDHB8Q9UN66 801 aa5.9□□□□□ -1.46
HMGB1P22-201ENST00000505315 PCDHB13Q9Y5F0 798 aa5.9□□□□□ -1.46
HMGB1P22-201ENST00000505315 A6NJR5 290 aa5.89□□□□□ -1.47
HMGB1P22-201ENST00000505315 PSEN1P49768 467 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms