RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ABCC9O60706 1549 aa14.52□□□□□ -0.08
AC055713.1-201ENST00000498967 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
AC055713.1-201ENST00000498967 GOLGA6L4A6NEF3 574 aa14.51□□□□□ -0.09
AC055713.1-201ENST00000498967 PRM3Q9NNZ6 103 aa14.5□□□□□ -0.09
AC055713.1-201ENST00000498967 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
AC055713.1-201ENST00000498967 PLCB2Q00722 1185 aa14.48□□□□□ -0.09
AC055713.1-201ENST00000498967 A0A0U1RQG5 324 aaPredicted RBP14.48□□□□□ -0.09
AC055713.1-201ENST00000498967 FGD1P98174 961 aa14.46□□□□□ -0.09
AC055713.1-201ENST00000498967 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
AC055713.1-201ENST00000498967 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.1
AC055713.1-201ENST00000498967 CLSTN1O94985 981 aa14.45□□□□□ -0.1
AC055713.1-201ENST00000498967 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
AC055713.1-201ENST00000498967 CCDC34Q96HJ3 373 aa14.44□□□□□ -0.1
AC055713.1-201ENST00000498967 TONSLQ96HA7 1378 aa14.44□□□□□ -0.1
AC055713.1-201ENST00000498967 DRC7Q8IY82 874 aa14.43□□□□□ -0.1
AC055713.1-201ENST00000498967 A0A0G2JS52 829 aa14.4□□□□□ -0.1
AC055713.1-201ENST00000498967 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
AC055713.1-201ENST00000498967 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
AC055713.1-201ENST00000498967 FAM9BQ8IZU0 186 aa14.38□□□□□ -0.11
AC055713.1-201ENST00000498967 GOLGA2Q08379 1002 aa14.37□□□□□ -0.11
AC055713.1-201ENST00000498967 CEP89Q96ST8 783 aa14.35□□□□□ -0.11
AC055713.1-201ENST00000498967 KCNJ4P48050 445 aa14.34□□□□□ -0.11
AC055713.1-201ENST00000498967 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
AC055713.1-201ENST00000498967 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
AC055713.1-201ENST00000498967 RRP12Q5JTH9 1297 aaKnown RBP14.34□□□□□ -0.11
AC055713.1-201ENST00000498967 FTSJ3Q8IY81 847 aaKnown RBP14.34□□□□□ -0.11
AC055713.1-201ENST00000498967 TPM4P67936 248 aa14.33□□□□□ -0.11
AC055713.1-201ENST00000498967 MS4A1P11836 297 aa14.33□□□□□ -0.12
AC055713.1-201ENST00000498967 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
AC055713.1-201ENST00000498967 MCCP23508 829 aa14.32□□□□□ -0.12
AC055713.1-201ENST00000498967 EIF4G2P78344 907 aaKnown RBP eCLIP14.32□□□□□ -0.12
AC055713.1-201ENST00000498967 SYAP1Q96A49 352 aaPredicted RBP14.31□□□□□ -0.12
AC055713.1-201ENST00000498967 NPHP1O15259 732 aa14.31□□□□□ -0.12
AC055713.1-201ENST00000498967 FBLN2P98095 1184 aa14.3□□□□□ -0.12
AC055713.1-201ENST00000498967 GNL2Q13823 731 aaKnown RBP14.29□□□□□ -0.12
AC055713.1-201ENST00000498967 SALL2Q9Y467 1007 aaPredicted RBP14.27□□□□□ -0.12
AC055713.1-201ENST00000498967 GPS2Q13227 327 aa14.27□□□□□ -0.13
AC055713.1-201ENST00000498967 KRI1Q8N9T8 703 aaKnown RBP14.27□□□□□ -0.13
AC055713.1-201ENST00000498967 HMMRO75330 724 aa14.26□□□□□ -0.13
AC055713.1-201ENST00000498967 CHGAP10645 457 aaKnown RBP14.26□□□□□ -0.13
AC055713.1-201ENST00000498967 CFAP53Q96M91 514 aa14.26□□□□□ -0.13
AC055713.1-201ENST00000498967 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
AC055713.1-201ENST00000498967 MRS2Q9HD23 443 aa14.25□□□□□ -0.13
AC055713.1-201ENST00000498967 CCDC70Q6NSX1 233 aa14.24□□□□□ -0.13
AC055713.1-201ENST00000498967 NAP1L2Q9ULW6 460 aaPredicted RBP14.23□□□□□ -0.13
AC055713.1-201ENST00000498967 TPRNQ4KMQ1 711 aa14.22□□□□□ -0.13
AC055713.1-201ENST00000498967 TPM3P06753 285 aa14.22□□□□□ -0.13
AC055713.1-201ENST00000498967 GOLGA6L3A6NEY3 463 aa14.22□□□□□ -0.13
AC055713.1-201ENST00000498967 OS9Q13438 667 aaPredicted RBP14.2□□□□□ -0.14
AC055713.1-201ENST00000498967 GBP4Q96PP9 640 aa14.2□□□□□ -0.14
AC055713.1-201ENST00000498967 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
AC055713.1-201ENST00000498967 NOP58Q9Y2X3 529 aaKnown RBP14.19□□□□□ -0.14
AC055713.1-201ENST00000498967 HAP1P54257 671 aaPredicted RBP14.18□□□□□ -0.14
AC055713.1-201ENST00000498967 CSPP1Q1MSJ5 1256 aa14.18□□□□□ -0.14
AC055713.1-201ENST00000498967 STK11IPQ8N1F8 1099 aa14.18□□□□□ -0.14
AC055713.1-201ENST00000498967 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
AC055713.1-201ENST00000498967 PHF14O94880 888 aa14.17□□□□□ -0.14
AC055713.1-201ENST00000498967 DCAF1Q9Y4B6 1507 aa14.17□□□□□ -0.14
AC055713.1-201ENST00000498967 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
AC055713.1-201ENST00000498967 NOM1Q5C9Z4 860 aaKnown RBP14.15□□□□□ -0.14
AC055713.1-201ENST00000498967 HSP90B1P14625 803 aaKnown RBP14.15□□□□□ -0.14
AC055713.1-201ENST00000498967 TSR1Q2NL82 804 aaKnown RBP14.15□□□□□ -0.14
AC055713.1-201ENST00000498967 P3H3Q8IVL6 736 aa14.14□□□□□ -0.15
AC055713.1-201ENST00000498967 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
AC055713.1-201ENST00000498967 DDX10Q13206 875 aaKnown RBP14.13□□□□□ -0.15
AC055713.1-201ENST00000498967 KIAA1211Q6ZU35 1233 aa14.13□□□□□ -0.15
AC055713.1-201ENST00000498967 ZNF777Q9ULD5 760 aaPredicted RBP14.13□□□□□ -0.15
AC055713.1-201ENST00000498967 CDR1P51861 262 aa14.12□□□□□ -0.15
AC055713.1-201ENST00000498967 TEX35Q5T0J7 233 aa14.12□□□□□ -0.15
AC055713.1-201ENST00000498967 C14orf37Q86TY3 774 aa14.12□□□□□ -0.15
AC055713.1-201ENST00000498967 LAS1LQ9Y4W2 734 aaKnown RBP14.12□□□□□ -0.15
AC055713.1-201ENST00000498967 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.11□□□□□ -0.15
AC055713.1-201ENST00000498967 ZCCHC6Q5VYS8 1495 aaKnown RBP14.11□□□□□ -0.15
AC055713.1-201ENST00000498967 ISY1Q9ULR0 285 aaKnown RBP14.1□□□□□ -0.15
AC055713.1-201ENST00000498967 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
AC055713.1-201ENST00000498967 CCDC191Q8NCU4 936 aa14.1□□□□□ -0.15
AC055713.1-201ENST00000498967 APPP05067 770 aa14.09□□□□□ -0.15
AC055713.1-201ENST00000498967 CALD1Q05682 793 aaKnown RBP14.09□□□□□ -0.15
AC055713.1-201ENST00000498967 HSP90AA2PQ14568 343 aaPredicted RBP14.09□□□□□ -0.15
AC055713.1-201ENST00000498967 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.15
AC055713.1-201ENST00000498967 MAPK8IP3Q9UPT6 1336 aa14.08□□□□□ -0.16
AC055713.1-201ENST00000498967 NUDCQ9Y266 331 aa14.08□□□□□ -0.16
AC055713.1-201ENST00000498967 CHMP4AQ9BY43 222 aa14.08□□□□□ -0.16
AC055713.1-201ENST00000498967 KIF3AQ9Y496 699 aa14.07□□□□□ -0.16
AC055713.1-201ENST00000498967 TPM1P09493 284 aa14.07□□□□□ -0.16
AC055713.1-201ENST00000498967 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
AC055713.1-201ENST00000498967 DCTN1Q14203 1278 aa14.05□□□□□ -0.16
AC055713.1-201ENST00000498967 CHMP4CQ96CF2 233 aa14.05□□□□□ -0.16
AC055713.1-201ENST00000498967 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
AC055713.1-201ENST00000498967 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
AC055713.1-201ENST00000498967 TPM2P07951 284 aa14.03□□□□□ -0.16
AC055713.1-201ENST00000498967 NEXNQ0ZGT2 675 aa14.03□□□□□ -0.16
AC055713.1-201ENST00000498967 RSPH6AQ9H0K4 717 aa14.02□□□□□ -0.16
AC055713.1-201ENST00000498967 ZBTB7CA1YPR0 619 aa14.02□□□□□ -0.17
AC055713.1-201ENST00000498967 IPO7O95373 1038 aaKnown RBP14.02□□□□□ -0.17
AC055713.1-201ENST00000498967 PPP1R15AO75807 674 aaPredicted RBP14.02□□□□□ -0.17
AC055713.1-201ENST00000498967 ZRSR2Q15696 482 aaKnown RBP14.01□□□□□ -0.17
AC055713.1-201ENST00000498967 RDXP35241 583 aaKnown RBP14□□□□□ -0.17
AC055713.1-201ENST00000498967 CCDC180Q9P1Z9 1646 aa14□□□□□ -0.17
AC055713.1-201ENST00000498967 RASSF8Q8NHQ8 419 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms